Zcuc003501.1
Basic Information
- Insect
- Zeugodacus cucurbitae
- Gene Symbol
- dmrta2
- Assembly
- GCA_028554725.2
- Location
- CM053019.1:54153506-54159092[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-27 2e-23 83.0 10.8 1 47 37 83 37 83 0.99 2 2 4 3.8e+04 -7.7 4.7 11 21 341 351 335 359 0.60
Sequence Information
- Coding Sequence
- ATGAGTTTACCCAACGGCGTGGATATGCAAAATTTAATGTCTCAACATCCAGTTTTAGGCGCTCTACCACCCGCTTTCTTTCTACGCGCCGCTTCGGAGCGTTATCAGCGTACACCGAAATGTGCGCGTTGTCGCAATCATGGCGTGGTGAGCGCCCTGAAAGGACACAAACGTTATTGCCGTTGGCGAGATTGTGTTTGTGCGAAATGCACATTGATTGCGGAGCGACAACGCGTTATGGCCGCACAGGTTGCGCTACGTCGCCAACAAGCACAAGAGGAAAACGAGGCACGCGAATTGGGCCTACTCTACACCAATGTGCCGCCGGGACAGTCGAATGGTGTTGATggaggcggcggcggcggtgttGTCACACCGAATCAGCACAGTCCCGCGCCACCAATGACAAATGCAGCTGGTTTTCACCCCGGCATACCGTCACCGCCCAGCGATGGCTTGGACACCAGCAACAGTCAGCGTATACAGTATAACGGCAATGAATCAGATACGGATGTGCGTATGCGTTCTTCGGAGCGTCTCTCGATGGGCTATTCGCCGGATCGCAGTACCGAAGTGGAAAGTCCAGGTTCGAAACGCGCACGCCTCTCCAATGAGACCGATCAAGACACCGGCTCCGAGTCGTCGCCCAGCAGTCCACGCATGAAGTCCCGCAACTACCATGACAGCGGCAATATTTCGCCCAGCCGCACCGGGCCGCCCAGTTCGCCGGAATCCGATCTCGATGTGGACTCAGCGCCCGACGAAGCGACACCCGAGAATCTCAGTCTGAAGAAAGAAGACTCCACTTCGCCACCAAACACGCCCACTGATAATCTGCATTTGCTACGCACATTCAATAATGGCGCCGCACAGGGTTTCATGCCATATCATCACACGCAGTTCCTCGCGGCTGCCATgcctgctgctgccgccgccgccgctgccggCGTTGGTGTACATCCACACAGCCAGCATTCACCGCATGCACATCATCAGCAGCATCAACATCATGCGGCgcatcatcagcagcagcatcaacagcaacaacaccagcagcagcaacaacaacagcagcatgcGCTGCCACTTGCAatgatgcaacaacaaatccaAGCTGCACAACCACAACAACGTTCACCCGTCGATGTGCTGCTGCGCGTCTTTCCCAATCGCCGTCGCAGTGACGTCGAACAGTTGTTGGCGCGCTATCGCGGTGACGTACTCCAAGCCATGGAGGCTATGCTCTCCGGTGAAGACATGACGCAGGCGCTGGCTTCCGCAGCCGTGGCGGCAGCTGCTGCATCGGCCGCCGCGTCACCACCGAATGTGCCGCCTTCACCGCCATTCCCGCTCAAATCGGCCTTCTCACCGCTGGTGCCACCCGCTGCCGTGTTCGGTTCACCAACACACCGTTACCCACCCTTCATGCAGGCGCATGCGAAGCGGTTCCTTGCCGGTCCGTATGCGGGCGCCGCGTACTTGCCCGGTGTGCTGCCGCCCGATGTGATCGATCAGGCTGAGTCGAATGGCGGTGCGTCAATGGATCGCAACAGCAATGCCGGCGACTCACAAGATTGA
- Protein Sequence
- MSLPNGVDMQNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTNVPPGQSNGVDGGGGGGVVTPNQHSPAPPMTNAAGFHPGIPSPPSDGLDTSNSQRIQYNGNESDTDVRMRSSERLSMGYSPDRSTEVESPGSKRARLSNETDQDTGSESSPSSPRMKSRNYHDSGNISPSRTGPPSSPESDLDVDSAPDEATPENLSLKKEDSTSPPNTPTDNLHLLRTFNNGAAQGFMPYHHTQFLAAAMPAAAAAAAAGVGVHPHSQHSPHAHHQQHQHHAAHHQQQHQQQQHQQQQQQQQHALPLAMMQQQIQAAQPQQRSPVDVLLRVFPNRRRSDVEQLLARYRGDVLQAMEAMLSGEDMTQALASAAVAAAAASAAASPPNVPPSPPFPLKSAFSPLVPPAAVFGSPTHRYPPFMQAHAKRFLAGPYAGAAYLPGVLPPDVIDQAESNGGASMDRNSNAGDSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01505424;
- 90% Identity
- iTF_00082968;
- 80% Identity
- -