Zcuc020988.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zeugodacus cucurbitae
Gene Symbol
lola
Assembly
GCA_028554725.2
Location
CM053023.1:9349091-9351654[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-11 2.8e-08 34.4 0.0 4 45 427 468 424 468 0.91

Sequence Information

Coding Sequence
ATGGGTGGCCCACACCCGCCATTGCCGACCATCGAGGGTCAGACATATTGTTTACGTTGGAATAATCACAAATCAAATCTTGTCGAGATTCTTGATGCTCTAATTAAGGTCGAGAGCTATGTGGACTGCACAATTGTTGTGGATGACCAGGTGCATTTCAAAGCGCACAGGGTTGTTCTAGCCGCCAACTCGCCATATTTCCAGGCCATACTGCAGGATGTACCCATGGATCATTGCAGCATTATATTTCCCGGTGTCAAGGCGTTCGAAATGCGTGCACTACTGGATTACATGTACACCGGTGAAGTGAATGTAACGCAGAGTCAGATACCGACTATAATGCGTATTGCCGAGGAGCTGGAGGTGAAAGGACTGTTCGATATGGCCGATCTGAAGGAGAAATTCAACAAACTGAGCGAAGAACATGCGGATCGTGCCAGTCACGGTTACCCGTATGCAGCAGCCAGTACTTCGAGTCTAACAGCACCGTATGCCATGGCTACAAGTTCGTCCTCTGCACAGGGTGTACACAATGGCAAGGATCACCATGCCGCCGATTTACCAATACCTTCACAACACAATTCCTCATCCGTGATCTCAACGTCATCGCACATATCACCATCAGCTGCAGCTACGAGCACGTCCTCGCCACCCTACACAAATTATAAATCGCCATATACCAATCTGTATTCCAAATCCCCCGGTCCCTCCAATGGTGGTGCACCCACTGGGAATGGATCTGGCTTAGGACAAACAAAATCTGCCAATACACCACAGACACCAACACATTCACAAGCTCAGGCGCCAAATGCAGATCATGCACAATGGCCGTTATCGCCGTCGGCAGCTGTCGGTATGTTGGGTTCAGTCTATGACTCTGTCCCCGACAATCCACTCAAACGTAAAAAGCTCTCGTCAATGACTTCAATGCTAATGAATCGCGACACCCCCATTTTACGCAACGTCTTGGCCCAAGCTAATCCCGCCGACTCATCTCAGCCAATATCATTCTCAATGCCCGCTGCCAGCAAAGCCGACAACAAATCGAATACCGACAAAAACTCACCACATGGCGGACATAACAATAATCATGGTCAACATTTTAACGGCACCGAATATGGCAGTGATAAGAAATATCACGATGAACCACATTCGCCTTACACAGATCGCTCGTTTGATGACGACGGTTATGATGCCAAGGGAAATTATGGTGGCGGATTCAGCTCTAACGCGAACCAGAAACCCGAATGGAAACGCTATAAACAATACACACGCAGCGATATCATGTCCGCCATTCAATGTGTACGGGAAGGTATGAGCGCACTGCAAGCCTCACGAAAATTCGGTGTACCGTCACGCACACTCTACGACAAAGTCAAGAAGTTGGGTATAACCACCGGTCGTCCCATGAATCGCACCATGAAACGTAGTCCGAGTAATGTGGACTCAACCGCTGCCTTCTCCTATCCACACGGTTATGGCGCCGAGCCCTTAATGTCATCAATGCATGAAGGACGCAGTGATGAACGCGAGCCAAAAGACCACCACCGCACCGAACATCATCACATGCCACCACAATTGCCGCATTCGCTGCTGGATCACGCATTGCTACAGCAGGCGTTGGAGAGTCGTGGCGGAGACATTGCAGGACGCGGTGCACTATTGCTAGCAGCTGCAGCGCACGCCGCCGCCAACCGTATCTCAACCAGCCCCGGACCTAACGGTTCCAGCGCCATGCGTTCGCCCAGTCCACCGAATTATGGTCGTAAATACGGACGTGGTGGAAGTGAGCAAGATTACGCCATGGAACGGGACGGACGCAGACGTGAACGCGGCAGAGAACGCGATATGGATGGCAGTCGGGAAAATGAACGACGCATGCTGGAGCATGAGTTAGAACATGAGCGTGAGCTGGCGAGTGAAAGCGAACGCGAACGCGAGTATGAGCGTGAACAGCGCGAAGAACGCGAAAGTGAAAGGAAGCGTGCGCGCGAATACGAGCGCGAACATGAGCGTGACATGGACCGCGAGCATGCACGTAGTCGTAAACGTGCCAGCCGACGACGCTCGCACGACGATGAGGAAACTAACGGCCAAGTTGAAGATCTGTCTGTAGCGCGCCGCCAATGCATATCGCCAGCACCCAACTCAGTGTCACCACACAGGCGAACGCGTTCACCATCCTACTCACCGCCACCAGCACCACCAGCAACACAACCGGCAGCGCTCGATTGCGGCAGTGGCGTCATAAAACTCGCAACCACCGCCGCGGTTGCCATCAATCCAGCCGACATTAGTCGCTGTTCGAGCCGCAGCAGTAACGGTTTAACCATGGCTGATACCAACATCAGCAACGACGAGTACAACGAAACGAGCGCCACCTTAGAAGCCGCAACAACAATGACAGCGATCAAGCGTGAAATCATTAGCAGCGACGACGGACGCAACGACTGA
Protein Sequence
MGGPHPPLPTIEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVHFKAHRVVLAANSPYFQAILQDVPMDHCSIIFPGVKAFEMRALLDYMYTGEVNVTQSQIPTIMRIAEELEVKGLFDMADLKEKFNKLSEEHADRASHGYPYAAASTSSLTAPYAMATSSSSAQGVHNGKDHHAADLPIPSQHNSSSVISTSSHISPSAAATSTSSPPYTNYKSPYTNLYSKSPGPSNGGAPTGNGSGLGQTKSANTPQTPTHSQAQAPNADHAQWPLSPSAAVGMLGSVYDSVPDNPLKRKKLSSMTSMLMNRDTPILRNVLAQANPADSSQPISFSMPAASKADNKSNTDKNSPHGGHNNNHGQHFNGTEYGSDKKYHDEPHSPYTDRSFDDDGYDAKGNYGGGFSSNANQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNVDSTAAFSYPHGYGAEPLMSSMHEGRSDEREPKDHHRTEHHHMPPQLPHSLLDHALLQQALESRGGDIAGRGALLLAAAAHAAANRISTSPGPNGSSAMRSPSPPNYGRKYGRGGSEQDYAMERDGRRRERGRERDMDGSRENERRMLEHELEHERELASESEREREYEREQREERESERKRAREYEREHERDMDREHARSRKRASRRRSHDDEETNGQVEDLSVARRQCISPAPNSVSPHRRTRSPSYSPPPAPPATQPAALDCGSGVIKLATTAAVAINPADISRCSSRSSNGLTMADTNISNDEYNETSATLEAATTMTAIKREIISSDDGRND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00303743;
90% Identity
iTF_01563880;
80% Identity
iTF_01563003;