Ccap011448.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- bab2
- Assembly
- GCA_000347755.4
- Location
- NW:959679-991208[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-12 9.1e-09 34.4 0.0 4 45 429 470 426 470 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGTCCACACCCTCCACTACCACCGACCATTGAGGGTCAAACTTATTGCCTTCGATGGAATAATCATAAATCCAATCTGGTTGAGATTCTCGATGCTCTAATCAAGGTCGAAAGCTATGTCGATTGCACGATAGTTGTGGATGATCAAGTGCAATTCAAAGCGCATAGAGTAGTGCTTGCCGCCAATTCACCATATTTCCAGGCCATACTGCAGGATGTACCCATGGATCATTGCAGCATTATTTTTCCCGGTGTCAAGGAATTTGAAATGCGCGCACTTCTTGATTATATGTACACTGGCGAGGTAAATGTAACGCAAAGTCAAATACCCACAATAATGCGTATCGCCGAGGAGTTAGAGGTGAAGGGTCTTTTTGACATGGCCGATCTGAAggagaaattcaataaattgagTGAAGAGCATGCAGACCGAGCCAGCCATGGTTATCCCTATACGGCAGCAAGCACATCAGCGCTGACGGCGCCTTACGCCATGGCTGCAAGTTCATCTTCTGCACAGGGCCTACCCAGCGGCGTGCATAATGGCAAGGAACATCATGGCGCGGATTTACCAATACCTTCACTGCATAACTCCTCATCCGTGATCTCAACGTCATCGAACATTTCGCCATCAGCTGCAGCCTCGAGTACCTCTTCACCTCCTTATACTAATTATAAGTCACCCTATTCAAATCTATATTCCAAATCGCCTGGTCCCGCCGGCAATGGCTCCGGTGTAGGGCAAACAAAATCAGCCAATGCACCTCAAACTCCAACGCATTCACAATCTCAACCATCAAATCAGGAACATGGTCAATGGCCGTTATCGCCATCGGCAGCTGTCAGCATGTTAGGCTCTGTCTACGACTCCGTACCAGACAACCCACTAAAGCGTAAAAAGATTTCCTCAATGACTTCGATGCTAATGAACCGTGATACCCCCATCTTACGCAATGTCTTGGCTCAGGCCAATCCCGCCGACTCATCTCAGCCAATGTCATTTTCATTACCTGGTGCCAGCAAGTCGGACAAATCGAATGCCGACAAAAACTCACCACATACCGGACCAATGGGTGCACACAATAACAGCCAAGGACAACACTTTAACGGAGCTGATTATGGCAACGATAAGAAATATCACGACGAACCACATTCGCCGTACACTGACCGCTCGTTTGACGATGACGCTTACGACGCGAAGGGTAATTTTGGCAGTGGATTCAGTTCTAATGCCAATCAGAAGCCGGAATGGAAACGTTATAAACAATATACACGTAGCGATATTATGTCCGCCATTCAATGTGTTCGGGAAGGGATGAGTGCGCTTCAAGCATCACGAAAGTTCGGTGTACCCTCGCGTACACTCTACGACAAAGTAAAGAAGCTGGGAATAACCACAGGCCGGCCAATGAATCGTACCATGAAACGTAGTCCCAGTAATGTAGACTCATCCGCCGCTTTCTCTTATCCACACGGTTATGGGGCAGAGCCTTTAATGTCATCGCTACATGAAGGGCGTAACGATGACCGTGAACCTAAAGACCACCATCGTGCCGATCACCATCATATACCACCACAGCTGCCACATTCCTTATTGGATCACGCGCTCTTGCAACAGGCATTGGAAAGCCGTGGAGGAGACATTGCCGGACGAGGTGCTCTGTtgctagcagcagcagcacatgCTGCAGCAAATCGTATTTCAACCAGTCCAGGCCCGAACGGGTCGAGTGTAATGCGTTCTCCTAGCCCACCGAATTATGGTCGAAAATATGGACGCGGAAGTGAACAAGACTATGCGATGGAACCAGAACGTGGTCGCGATCGTGAGCGGGAACGCGAACGTGGTAGAGATCGTGATGTCGATTGTAGTCGTGTAAACGAACGTCGTATCCTAGAACAGGAGTTAGAGCATGAGCGTGAAATGGCAACCGAAAGTGACCGTGAGCAAGACTACGAACGTGAACTACGCGATGAACGTGAATGCGATAGGAAGCGTCTGCGCAATTTCGAGAGGGAACATGAACGGGAGAGAGGACGTGAACGTAAACGCGTCCATCGACGACACTCGCACGACGACGAAGAGACTACTGGACACGTTGAAGATCTGTCTGTAACGCGCCGACAATTCACATCGCCTGAACCTGTAGCGGTGGCACAAAGGCGAGTACGTTCACCATCATActcgccaccaccaccagctaCACAAGCAACAATACCCCAACCAACAGCAGTTGAATGCAGCAGTGGTGTTATAAAGCTTGCAACCGCTGCCGCAGTGGCTGTGACCGCTACAAACGCACTCAACCCAGGCGATAATAGTCGCTGCTCGAGCCGTAGTAGCAACGGCTTAACGATGGCAGACaataatagcaacgaggagttCATCAATGAATCCGGCGCCGCTTTAGACGCGGCAACAGCCATGACAGCGATAAAGCGAGAAATCATCAGCACAGACGATGGACGCAACGACTGA
- Protein Sequence
- MGGPHPPLPPTIEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQAILQDVPMDHCSIIFPGVKEFEMRALLDYMYTGEVNVTQSQIPTIMRIAEELEVKGLFDMADLKEKFNKLSEEHADRASHGYPYTAASTSALTAPYAMAASSSSAQGLPSGVHNGKEHHGADLPIPSLHNSSSVISTSSNISPSAAASSTSSPPYTNYKSPYSNLYSKSPGPAGNGSGVGQTKSANAPQTPTHSQSQPSNQEHGQWPLSPSAAVSMLGSVYDSVPDNPLKRKKISSMTSMLMNRDTPILRNVLAQANPADSSQPMSFSLPGASKSDKSNADKNSPHTGPMGAHNNSQGQHFNGADYGNDKKYHDEPHSPYTDRSFDDDAYDAKGNFGSGFSSNANQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNVDSSAAFSYPHGYGAEPLMSSLHEGRNDDREPKDHHRADHHHIPPQLPHSLLDHALLQQALESRGGDIAGRGALLLAAAAHAAANRISTSPGPNGSSVMRSPSPPNYGRKYGRGSEQDYAMEPERGRDRERERERGRDRDVDCSRVNERRILEQELEHEREMATESDREQDYERELRDERECDRKRLRNFEREHERERGRERKRVHRRHSHDDEETTGHVEDLSVTRRQFTSPEPVAVAQRRVRSPSYSPPPPATQATIPQPTAVECSSGVIKLATAAAVAVTATNALNPGDNSRCSSRSSNGLTMADNNSNEEFINESGAALDAATAMTAIKREIISTDDGRND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00303897; iTF_01563686; iTF_01562819; iTF_01563880; iTF_01563003; iTF_01045395; iTF_01045579; iTF_00191289; iTF_00190758; iTF_00190599; iTF_00189870; iTF_00191449; iTF_00190048; iTF_00192745; iTF_00192904; iTF_00192176; iTF_00192015; iTF_00193488; iTF_00193670;
- 90% Identity
- iTF_00303897; iTF_01045395; iTF_01045579;
- 80% Identity
- iTF_00303897;