Zcuc015075.2
Basic Information
- Insect
- Zeugodacus cucurbitae
- Gene Symbol
- bab1
- Assembly
- GCA_028554725.2
- Location
- CM053021.1:68028537-68030356[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-17 4.5e-14 53.0 0.0 1 43 56 99 56 101 0.95 2 2 6.2 1.1e+04 -2.7 0.5 3 13 194 204 192 208 0.79
Sequence Information
- Coding Sequence
- ATGCTGGAGAATTCACATGCTTGGATGGGCCCATCAAGCTCTTCAACAATTGCAGCAGACAGCTATCAATATCAATTGCAATCCATGTGGCAGAAATGTTGGAACACAAATCAAAGTCTCATGCATCACCTGCGCTTCCGCGAACGAGGCCCACTCAAATCGTGGCGTCCCGAAACAATGGCCGAGGCAATTTTTAGCGTACTCAAGGAGGGACTCTCATTATCGCAGGCGGCACGCAAATACGATATACCCTATCCAACATTCGTATTGTATGCGAATCGTGTGCATAATATGCTTGGCCCTTCCATTGACGGGGGACCTGATCTGCGCCCAAAGGGTCGTGGTCGTCCGCAACGCATATTGCTGGGCATTTGGCCGGATGAACACATTAAGGGTGTCATTAAGACAGTTGTCTTCCGCGACGCAAAAGATCTCAAGGATGATAGTATAGTGCCACATTTACCCTATGGTCGGCACTCGCCCATGTTTCCATTTCAGGACGGTCCTCTCAACTACCCGGGCATGAGTGGTCCCTGCCCGAATGGTGTGCCCACACCCACCGGTGATCAGATGTCGCAAGAGGCGACCGCTGCCGCTGTGGCTGCTGTGGCGCACAATATACGCCAGCAAATGCAATTGGCCGCAGCCGTACAACATCAACATCCGTCGGAGGGTCCTTCGGGCCCAGGTCTATTTAATATACCTCCGCATTTGCAACCACATTTGGCCGCCGCAGCATCAGCTGGATCTGGTGGCGCCGCGCCTGGTGTGCATGGCTCCGTACCGCTACCAAAGACGAGCATATCTCCTGCGTTGAGTACCACATCGAACCCCGGCGCGGGCACAATGCTTGGACCGCGGCATGCACCATCGCCCTGTGGTCCTGGCTTACCAGGTCTTCCGCCGAACTTACCACCCAGCATGGCCATGGCATTACATATGGGTCGTTGCGATCCAACCGGTGTGCTcagccagcagcagcagttgcAACACCTACATATGCAACAGCAGCAAGCattacagcaacagcaacaacagcaacatcatcagcaacaacaacaacatggctACGGTTACGGTGTTAGTTCCATGCCGCATCATGGCGCAGCCTCAGCTTCAACAGCAACGTCAGCTTCCAGTCAACAttaccaacaacaccaacatcagCACCAGCATCCACAGTCACAGCAGTCACAAGCTCAACAGCAACAGTtgcatcagcagcaacaacaacaccaacatcagCAACACCATCAATCATCGTTGGTTAGCGCGACTGCGACAAAAGCGAAATGTCCTTCCCCCACATCCCTACTCGAACATCGTCGCGGCAGTCCAAGCGGTGATTCACACCTACACTCCACACTTACCGAGCTAGGCTTGGATATGGGCTATAAGACAACGCGTAGCAGCGCTTACTCGCCCACACGTCTCTTCTCCGAAGACTTGGCGGCTCTGGTGGGCGCCAGCGAAGACTCACCTCCGGGCACCACGGCGCCCTCTACCAATGTTAGCAGTACCAGCACGGTGACGACGTCCGCAACGTCTGGCAGTCACCCGGACGTTAGCATTACCTCGAGTGCAACGAGCGGTAATATAAGTTCCAGTAATATAAAAATCGAACCCATCACGACCAGTAGCGAATAA
- Protein Sequence
- MLENSHAWMGPSSSSTIAADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDLKDDSIVPHLPYGRHSPMFPFQDGPLNYPGMSGPCPNGVPTPTGDQMSQEATAAAVAAVAHNIRQQMQLAAAVQHQHPSEGPSGPGLFNIPPHLQPHLAAAASAGSGGAAPGVHGSVPLPKTSISPALSTTSNPGAGTMLGPRHAPSPCGPGLPGLPPNLPPSMAMALHMGRCDPTGVLSQQQQLQHLHMQQQQALQQQQQQQHHQQQQQHGYGYGVSSMPHHGAASASTATSASSQHYQQHQHQHQHPQSQQSQAQQQQLHQQQQQHQHQQHHQSSLVSATATKAKCPSPTSLLEHRRGSPSGDSHLHSTLTELGLDMGYKTTRSSAYSPTRLFSEDLAALVGASEDSPPGTTAPSTNVSSTSTVTTSATSGSHPDVSITSSATSGNISSSNIKIEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045393;
- 90% Identity
- iTF_00191286;
- 80% Identity
- -