Nasi009026.3
Basic Information
- Insect
- Neoceratitis asiatica
- Gene Symbol
- bab1
- Assembly
- GCA_030068015.2
- Location
- CM061526.1:81805995-81807914[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 2.7e-14 52.8 0.0 1 43 56 99 56 101 0.95 2 2 4.5 7.4e+03 -3.0 0.7 3 13 194 204 192 207 0.78
Sequence Information
- Coding Sequence
- ATGCTGGAGAACTCACATGCTTGGATGGGCTCCTCGGGCTCTTCGACAATTGCAgCAGACAGCTACCAGTATCAGTTGCAATCGATGTGGCAGAAATGTTGGAATACCAATCAAAGTCTCATGCATCACCTGCGTTTCCGCGAACGTGGTCCACTCAAATCGTGGCGACCCGAGACGATGGCCGAGGCCATATTCAGCGTACTCAAAGAGGGTCTCTCACTATCACAAGCAGCACGCAAATACGACATACCCTACCCGACCTTCGTGCTGTATGCGAATCGTGTGCACAATATGCTTGGCCCATCCATCGATGGTGGGCCTGACTTACGTCCGAAGGGTCGTGGCCGTCCCCAACGTATACTACTTGGCATTTGGCCCGACGAACATATCAAGGGCGTCATTAAGACGGTGGTCTTCCGGGATTCAAAGGAACTGAAGGAGGAAAGTTTGGTGCCACATTTGCCCTATGGTCGACATTCGCCCATGTTTCCATTTCAGGATGCTCCACTTAACTATCCTGGCATGGGTGGTCCCTGTCCGAATGGTGTACCCACGCCGGCTGGTGATCAGATGTCCCAAGAGGCCACCGCTGCCGCCGTGGCTGCTGTAGCACACAATATACGTCAGCAAATGCAATTGGCTGCCGCCGTACAACATCAACATCCGTCGGAGGGCCCTGGCGGTCCTGGTTTGTTTAATATACCACCTCATTTACAACCACACTTGGCTGCAGCCGGTGTGTCTGGCTCTGCGGGACCTGCACCCGGCGTACATGGTTCGGTGCCGCTACCAAAAACAAGTATTTCTCCTGCACTCAGCACTACATCGAATCCCGGTGCTGGTGCAATGTTGGGTCCACGGCATGCTCCATCGCCTTGTGGTCCTGGTTTACCGGGTCTTCCGCCTAACTTACCGCCCAGCATGGCGATGGCGCTGCATATGGGTCGTTGTGATCCAACCGCTGTGCtcagccaacaacaacagcatcagtTGCAGCATCTGcacatgcagcaacaacaagcgctgcaacaacaacaacagcaacatcagcagcaacatcagcaacaacaacagcacgctCTTGGTTACGGTGTTAGTTCCATGCCCCACCATCTCGGTCCCACCGCGGCGGCCACTGCAACCTCATCTTCCAGCCATCattatcagcaacaacaacaacagcaacaacatcagaaccaacatcagcagcagcagccgcaaaatcagcagcagcagcaacaacaacatcagcagcatcagcaacaccagcaacaacaacaacaccttcaacaacaacaacagcttcaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcaccaacatcagcagcaacaccatcagccagcAAACGCTGGCGCCACAGCGTCTAAAATGAAATGTCTATCCCCCACATCACTACTTGAACACCAACGCCCCAGTCCCAGTGTCGATACACATTTGCACTCAACACTCACCGAGCTGGGCTTGGATATGGGCTTTAAAACCTCACGAAGTAGTGCTTACTCACCGACACGTCTCTTCTCCGAGGACCTCGCAGCCTTGGTGGGTGCCAGTGAGGACTCACCACCCGGTACGTCAGCAACCTCTACCATTGTAAGCAGCACTAGTACGGTAACTACGTCGGCCATGACGTCCGGCAGTCACACGGATGTTAGTATAACTTCCAGTGCAACGAGCGGTAACATAAGTTCCAGTAATATAAAAATCGAACCCATCACGACAAGTAGCGAATAA
- Protein Sequence
- MLENSHAWMGSSGSSTIAADSYQYQLQSMWQKCWNTNQSLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDSKELKEESLVPHLPYGRHSPMFPFQDAPLNYPGMGGPCPNGVPTPAGDQMSQEATAAAVAAVAHNIRQQMQLAAAVQHQHPSEGPGGPGLFNIPPHLQPHLAAAGVSGSAGPAPGVHGSVPLPKTSISPALSTTSNPGAGAMLGPRHAPSPCGPGLPGLPPNLPPSMAMALHMGRCDPTAVLSQQQQHQLQHLHMQQQQALQQQQQQHQQQHQQQQQHALGYGVSSMPHHLGPTAAATATSSSSHHYQQQQQQQQHQNQHQQQQPQNQQQQQQQHQQHQQHQQQQQHLQQQQQLQQQQQQQQQQQQQQQQHQHQQQHHQPANAGATASKMKCLSPTSLLEHQRPSPSVDTHLHSTLTELGLDMGFKTSRSSAYSPTRLFSEDLAALVGASEDSPPGTSATSTIVSSTSTVTTSAMTSGSHTDVSITSSATSGNISSSNIKIEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01562817; iTF_01563683; iTF_00192742; iTF_00189868; iTF_00192013; iTF_00191286; iTF_00091095;
- 90% Identity
- -
- 80% Identity
- -