Zcuc001477.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zeugodacus cucurbitae
Gene Symbol
Rel
Assembly
GCA_028554725.2
Location
CM053019.1:23505729-23508786[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-51 3.1e-47 161.8 0.4 1 168 148 330 148 331 0.94

Sequence Information

Coding Sequence
atgataaACGAGTATATAGATATGGATACGCAAAGTATTCGCTACGTAAGCGAATCATCGAATGCCAGTACTAGTGGATATTCCACGATGTCACCTGGATATAGTACTGTGAAATCAACACCACCGTCACCATCACAGTCTCCATCGAGTCAATTGCAGACAGAATTTTCAAATATGAACCTGCCCTCGGAGTCTCCACAAAATCAACCTTGTTATGCCACATTACAAAATGCAACTCTGTTGTACAATCAAACTGCTCATCCCCTAACTACAACAAATAATTGTATGAATTTCGCACCGGTCATGGGAATGCCATCAGCAATGGTTACATTACCACAGCATCAATTCAGTGGACTGCCGTCACAATCCTCACATATGTTTTCCAATACTTCCCGAACAGCGATGAGAACAACACCATCAAATGGGAAATATCCTGCGGAACTGCGTATACTTGAACATCCTGtagaaaaatttcgatttaGGTATAAATCTGAAATGCATGGAACACATGGTTCGTTGAATGGCGCCAATTCCAAACGTACACCAAAAACATTCCCTGAAGTGGAATTGTGCAATTTTAATGGTAAAGCCGTTATACGATGCAGTCTCTTTCAAACAAATCTGGAAAGCCCTCACTCACATCAATTAGTAGTGCGTAAAGACGATACGGACATTTGCGATCCACATAGTTTGATTGTTTCACCCGAGCGTGGTTATGTGGCACAATTTCAAAATATGGGCATCATACACACAGcaaagaagtttatttttgatgagttattaaataagaaaatgaatagattgaaatttgaattggcTCGTGATGAATTAACTACAAAAGAGGTACAAGAGCTACATAAAGAAACAGAGAAAGAGTCAAAGGAAATGAATCTGAATCAGgtGCGTTTATGTTTTGAAGCGTTTAAAATGGAGGATGATGGGATTTACACTCGTATAGCAGCGCCTGTATATACAAATCCAATCAACAATCGTAAGTCGGCACAAACTGGTGAACTACGCATATGTCGTCTAAGTATTGCTACCGGTAGCGTGACTGGCGGCGATGACCTCATTTTGCTAGTTGAAAAAGTAAgcaagaaaaacataaaagtaCGTTTCTATGAATTCAACGATGAAGAAGACCTGGTGTGGGAGGCATATGGTAAATTCCGAGAATCTGACGTACATCACCAATACGCAATCGTTTGTCAAACTCCGCCATACAAAGACAAGGACATTGATAAGCCTGTCGACGTTTGCATAGAATTAGTACGTCCCTCAGATGATGAACGTAGCTATCCACCAGTGACTTTCCGCTATAAGCCTCGTGATGTTATTGTGTCGCGAAAACGTCGGCGAACATGCTCGAGGTCCACCAGCAGTTCTGGTTCTGGTAGCTCTGTAAATTCATTTGAATTACCGAAACCAGTACAAGAACAAACTGCTAACCTAAAAATGGAAAACCGGCCAGTAAAAGTGCAACTTGTTAACACAAATGGTGGTGAATTTACAAATAATCATCCAACCATAAGTGAAGAATTCAATAAGGATTTACAAATTACTCGTATAATAGGTAGCGAAACTTTCAGAGAATGCATGCAAATGAACTCAGCCGAACTCGAAGATATATGTCACATAGATTCTATTGGCAATATTACGAATATCATAGATATGTACGAACTCTCTGGCCCTGGAACTCCAACTATTGGTGCACTTGTAGAGGATGGTGTATCTACGACATCCTTTTCAAACCGACAAATATCTGGTGATTTGCGTAAACAGTATATGAAATCCATATTAGGAGCACCTACGGATGTGCAGCTCAATagctatttacaaaaaatatttaaaatattcgatGATGTAAGaacatcaaaaataaaaagcgaaaacGAATTTGAGAAGGCTAAAGCAGCTAAAGAAATCGACGATGTATTTATGGAGCATTCAGAAAGAAATGAATTCCGCGAAAGCATACTACATGAAATTATAGTCAGTGATAATATAAAAGCGGTCTTGAAAACATATCATATTTTGGAATACTTCAAGCTTACACACCTTTTGAATAAAGTGCTGAATGCACGCAATGAAAGCGCCCTGCATACCGCTTGCTTGCACAATCGTGTCAAATATATTCGTCCACTTTTAGGTCTCGGCTGCGATCCAAATATTCAAAATCATGATGGAAACACAGCACTGCATATTGCTGTTAAGGAACATAATGAAAAGTGCATCGAAAGTTTTCTGAATAGTGGTATACGACTTGATTTGACGATTAAGAACGATGAAGGCTTCACACCGCTACATTTAGCTATTCGACAAAGGAAATCTGAAGTAGCTAAAAAGTTATTGCAATATGATCATCGTGCGGCACTTGTACCAAATGCGAAGGAACAAAATAATGCCCTCCATATGGCCGTATTGCAATCTGATTTTGAATTtgtcaaattaattttagaaacaGCAGCAGAAAATGTAAACGAACTCATGCAAGCATCCAATGCAGCCGGACGTAATGCTGTTGATTTAGCTAAAGAACTTAAGACAATAGTGGGCACACAAATTATCACATACTTCGCTTCATTAGGTTATAAAGTCATTGATAGTGGTAATTTAGTTGTAAAAGAAGAGGAGATATCCTCCACCTCTGGTGAAGAAGATGAAGATGGCACATCAAATTCAGTCGAAGAAACTAGAGAGATGGGAAAAATTAGAGTTAAAGATGAATTTAAAGACATGGGCTTGAATGATGTCGCGAAAAATAAGCCAACTACTTTTGAGGAATTGTTGCGCGATGAGCGAAAATACCGAATTCTTGTTGCTGCATTGAGTTTGCAAGATAAATGGAAGCAGCTAGCGGTGCCTTGCAAAATGCAGCATTTACTATGTTTGTGGAACAAAGCTGACGATATGCTGGATTATATgcgtaaaaatattgaatttgacgTGTTTGTCAATGCACTAGGGCTGGTAGATAAACAGGCCTTGAAGCTGctataa
Protein Sequence
MINEYIDMDTQSIRYVSESSNASTSGYSTMSPGYSTVKSTPPSPSQSPSSQLQTEFSNMNLPSESPQNQPCYATLQNATLLYNQTAHPLTTTNNCMNFAPVMGMPSAMVTLPQHQFSGLPSQSSHMFSNTSRTAMRTTPSNGKYPAELRILEHPVEKFRFRYKSEMHGTHGSLNGANSKRTPKTFPEVELCNFNGKAVIRCSLFQTNLESPHSHQLVVRKDDTDICDPHSLIVSPERGYVAQFQNMGIIHTAKKFIFDELLNKKMNRLKFELARDELTTKEVQELHKETEKESKEMNLNQVRLCFEAFKMEDDGIYTRIAAPVYTNPINNRKSAQTGELRICRLSIATGSVTGGDDLILLVEKVSKKNIKVRFYEFNDEEDLVWEAYGKFRESDVHHQYAIVCQTPPYKDKDIDKPVDVCIELVRPSDDERSYPPVTFRYKPRDVIVSRKRRRTCSRSTSSSGSGSSVNSFELPKPVQEQTANLKMENRPVKVQLVNTNGGEFTNNHPTISEEFNKDLQITRIIGSETFRECMQMNSAELEDICHIDSIGNITNIIDMYELSGPGTPTIGALVEDGVSTTSFSNRQISGDLRKQYMKSILGAPTDVQLNSYLQKIFKIFDDVRTSKIKSENEFEKAKAAKEIDDVFMEHSERNEFRESILHEIIVSDNIKAVLKTYHILEYFKLTHLLNKVLNARNESALHTACLHNRVKYIRPLLGLGCDPNIQNHDGNTALHIAVKEHNEKCIESFLNSGIRLDLTIKNDEGFTPLHLAIRQRKSEVAKKLLQYDHRAALVPNAKEQNNALHMAVLQSDFEFVKLILETAAENVNELMQASNAAGRNAVDLAKELKTIVGTQIITYFASLGYKVIDSGNLVVKEEEISSTSGEEDEDGTSNSVEETREMGKIRVKDEFKDMGLNDVAKNKPTTFEELLRDERKYRILVAALSLQDKWKQLAVPCKMQHLLCLWNKADDMLDYMRKNIEFDVFVNALGLVDKQALKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01563460; iTF_00191852; iTF_00191140; iTF_00189711; iTF_00190459; iTF_00192582; iTF_00193325;
90% Identity
iTF_01563460;
80% Identity
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