Zces002292.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- JAAMXH010000039.1:494792-499974[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 2.4e-05 0.0016 18.7 3.4 1 23 82 105 82 105 0.95 2 22 8.6e-05 0.0057 16.9 0.1 2 23 111 133 110 133 0.90 3 22 1.2e-05 0.00081 19.6 0.6 2 23 142 164 142 164 0.95 4 22 2.2e-06 0.00014 21.9 1.5 2 23 173 195 172 195 0.95 5 22 1.2e-05 0.00076 19.7 0.3 2 23 203 225 202 225 0.96 6 22 3.7e-06 0.00024 21.2 1.4 2 23 234 256 233 256 0.95 7 22 0.018 1.2 9.6 3.2 1 23 262 285 262 285 0.93 8 22 0.015 0.98 9.9 0.3 1 23 293 316 293 316 0.96 9 22 0.00031 0.021 15.2 1.4 1 23 336 359 336 359 0.97 10 22 0.0023 0.15 12.4 0.2 1 23 389 412 389 412 0.96 11 22 0.025 1.7 9.1 2.2 2 22 420 440 419 440 0.95 12 22 0.017 1.1 9.7 1.0 2 23 449 471 448 471 0.91 13 22 0.01 0.66 10.4 2.6 1 23 492 515 492 515 0.96 14 22 9.7e-07 6.4e-05 23.0 0.4 2 23 522 544 521 544 0.97 15 22 2.4e-05 0.0016 18.7 1.1 1 23 550 573 550 573 0.93 16 22 0.0033 0.22 11.9 1.9 1 23 579 602 579 602 0.98 17 22 0.62 41 4.8 4.6 2 23 610 632 610 632 0.95 18 22 4e-05 0.0026 18.0 2.4 1 23 639 662 639 662 0.97 19 22 0.42 28 5.3 0.7 1 19 669 687 669 689 0.94 20 22 0.035 2.3 8.7 1.2 3 23 706 727 705 727 0.92 21 22 3.5 2.3e+02 2.4 0.3 2 16 748 761 747 770 0.72 22 22 8.7 5.7e+02 1.2 0.5 1 10 777 786 777 787 0.86
Sequence Information
- Coding Sequence
- ATGCGTTACAAATGGATAGATGCTATGCACCGGTCGGACCTGATTGGTGATAGAACAACAGTGTACTGTTGTGAAGATCATTTCAAAaTTGAATTGGATATGGAGaactatgttaaatataaacttttcgGCGggagaattaaattaaaaaagggcACAGTTCCACACGCGTTTGAATGTCGGCGTGATAAAGAAGAGAAACTAGATGCGTCCGCAAACCAAaaacTGATGCAGCCACAAGACTTCGTTTGCGACTATTGCAGTCGCTCGTTCACCAGAAAATGCAACCTGGTAACCCACATTGAGAACTTCCACGTGAACGTCACTTGGTACTGCGAAATATGTGGCAAAACCTTCGGCAGAGCGGCAGCATTGAAGATCCATTTTAGCCAAGGTCACAACACGCAAGGACAAGGTCTGCCCGAATGCGACATTTGCGGTCGagtgtttaaaagaaaacagaaTATAATATCGCATATGACCTCAAAGCATTTCAGAATGTTGAAAACCTTCTCCACGTGCACCGTATGCGATAAGACATTCACAACGGATCGGAATTTGAAGCGGCACATCAATCAACTGCACAACCCCAACGTCCAATATCTCATATGCGATTATTGTCAGAAAGTGTTCAAGGGGAAACAGTCGTTAATATCCCATATAAATACGGTGCACAATCCGTTGGAAATGGATTACAATCAGTGTTTCTTGTGTGATAAAACATTCTCCAGCAATAGGAACTTGAGACGGCATGTTGAAATGTTGCACGGGGAAAGAACGGAGTTTAAATGTGATTTGTGTCCAAAAGTGTTCATGTGGCACCACAGTTTGCGGCGGCACACCCTAGCTAGGCATATGAGTGATAGTCTAGAACAGTTTCGTTGCAAATTctgtgataaaatattgtacgGAAGAGAGAATGTGGAGAATCACCTCGCAGTGTACCATAAACCGAAAGCCATAGACAAGTGCGTGTCCAACGAATGCATGGCGATAAAAATCGGACACCGCTGCGAGTATTGCCAGAGAATATTTGACGAGGAATCGCTGTTGCGGCAGCATGTCAAATCTGAGCATTCGTTTCAAGATTTCTACAGCTACTGCAAGAAATCTCTGTTGAATTTGAACGCTAAAGAGAACGAGGGTagaaacaaatttgttttctACAATTGCGAGTTGTGCACGGACGTTTTCACGTCCGTCTACGAGTTGAAAGACCACATGAAGGCGTGGCACGACGTGGACTACAGCCTGTCGACGTGCAATGTCTGTTTTAAGAAGTTTTTTAGCAAACATGCGATCACCGAACACCAGAAAACCTGCCTGCCCCCCGAAGGTGTGAAGAGCTGCGCAAATTGTGACAAGTTATTCACAGATCAATCGAGCCTCGAGTTCCACAATCGTATTTTCCATCCGCAAACGCAAATTCCCAAGATCACGTCCAGCGTCGACGATTCTAACATCAACGGGAGTTTCAAGTGCGACTTGTGCAGTCGGGTGTACATGAACGATCGATCGCTGAAACACCACGTGAAGCTGAATCACACAAACGAAACCGTAGTGCAGTGCGAGTTTTGCAATAAAGtgtacaacaataaatattatctcgCCGCGCACATGCGGACGGTGCACGCGGACGATAAAATGTTCCAGTGCGATTTGTGCGACAAAGTGTTTCGGAATAAGCGCGGGATACGCAGGCATATAGAGTTCACGCATATGGGCAAGTCTAGATACAAGTGCGTCGAGTGCGAGAGCCTGTTCAAGGAGAAACGCAGCTTGCGGAAGCATGTGCGATCCAAACACGCGCACTCGACCGTCTTCCCGCAGTGCCATGTGTGTTTGAAGCGTTTTGAATCGGCCAAATCGTGTAAAGTGCATTTGAAACTGCTGCATTCAGTCAACATGGACACGTATCCGTGCCACCTGTGCTCAATTTCGTTCAGCTCGAAGAAATCCCTGAAGATACACGTGTCGACGAAGCACTCGTCGAGGGAACAGATCTACAAATGCGACACTTGCAAGTCGGTATTCAACGGGCAGCTCAGCTTCGAACAGCACAACTCGAACGATAGCACGTGCAAAATGCAGAAAACGCAGAAGCTTGGGCCGCGCTGCATCATATGCGCGAAGGACTTCAGCGCGCGGAAAACGCTGCGGAGTCACATACGGAAATTCCATCCGGAATTCAACGTGGACGACTTGGCAAGATACGGCTCGGAGCGGAGGCTGTTTGTGGTTGAATGCGAGGATTGTTTGAGGAAGTTTAATGATGATGCCTATTACGAACACTATTTGAAGTTGAAGCATTTACGTGATACGATTGTATTCGAATGTGAACATTGCTCCGTGTCGTACAACTGCCTCGAATATTCGATACAGCGGTACAAAATGGCGCACGAAAAACTGAACACGAGCACGTTGATGTTGAGTGAGTTGTGTACGACGGAAATGAGCGAGGACTCGACGAGTTTGAGTGAGGTTGAGTGCTCTAGGTTCGAGGTGAAAACGGAATCCACGGGTTGCAGTCCGGTGCACGAAGTTACCGAATATGAGATAAAGACGGAGTGTGAAATCAAGTCTGAACCTATGTCTCCTTAA
- Protein Sequence
- MRYKWIDAMHRSDLIGDRTTVYCCEDHFKIELDMENYVKYKLFGGRIKLKKGTVPHAFECRRDKEEKLDASANQKLMQPQDFVCDYCSRSFTRKCNLVTHIENFHVNVTWYCEICGKTFGRAAALKIHFSQGHNTQGQGLPECDICGRVFKRKQNIISHMTSKHFRMLKTFSTCTVCDKTFTTDRNLKRHINQLHNPNVQYLICDYCQKVFKGKQSLISHINTVHNPLEMDYNQCFLCDKTFSSNRNLRRHVEMLHGERTEFKCDLCPKVFMWHHSLRRHTLARHMSDSLEQFRCKFCDKILYGRENVENHLAVYHKPKAIDKCVSNECMAIKIGHRCEYCQRIFDEESLLRQHVKSEHSFQDFYSYCKKSLLNLNAKENEGRNKFVFYNCELCTDVFTSVYELKDHMKAWHDVDYSLSTCNVCFKKFFSKHAITEHQKTCLPPEGVKSCANCDKLFTDQSSLEFHNRIFHPQTQIPKITSSVDDSNINGSFKCDLCSRVYMNDRSLKHHVKLNHTNETVVQCEFCNKVYNNKYYLAAHMRTVHADDKMFQCDLCDKVFRNKRGIRRHIEFTHMGKSRYKCVECESLFKEKRSLRKHVRSKHAHSTVFPQCHVCLKRFESAKSCKVHLKLLHSVNMDTYPCHLCSISFSSKKSLKIHVSTKHSSREQIYKCDTCKSVFNGQLSFEQHNSNDSTCKMQKTQKLGPRCIICAKDFSARKTLRSHIRKFHPEFNVDDLARYGSERRLFVVECEDCLRKFNDDAYYEHYLKLKHLRDTIVFECEHCSVSYNCLEYSIQRYKMAHEKLNTSTLMLSELCTTEMSEDSTSLSEVECSRFEVKTESTGCSPVHEVTEYEIKTECEIKSEPMSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00359140;
- 90% Identity
- iTF_01562162;
- 80% Identity
- iTF_01562162;