Zces010130.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- sip1
- Assembly
- GCA_012273895.1
- Location
- CM022611.1:6277662-6286589[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-19 3.3e-15 56.3 0.1 6 115 372 467 367 471 0.93 2 2 2.7e-20 2.2e-16 60.2 0.2 175 275 467 567 465 567 0.96
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAAGTTATACGTTTCGAAATTACGGACTACGATTTAGATAATGAATTTAATCCCAACCGAAGTAGGAAAGCTAAAAGAGAACAGCAAATATACgGTGTCTGGGCGAAAGATAGCGATGAAGATGATAATGAAGATAATGTTAGGCAGAGATCTAGAAAGCCTAAGGATTTCTCAGCTCCAATTGGCTTTGTTGCTGGTGGGGTGCAGCAGGCTGGTAAGAAGAaagagaaagaagaaaaacaagAAGTTGAATCAGCAGAAGCGTCCATGTCACGACCAAAGTTTGCAGACAGTTCCGATGAGGAGGAAGTGAGCAACCCAGCGGAGAGTGAAACTGCGGGGATACGGCGCGCCGGCCAGGGCATGCGACCCCCGAATCTGGGCGGGAATGTTGGTGCTTGGGAGAAACATACTAAGGGAATTGGCGCTAAGCTATTACTACAGATGGGTTACCAACCTGGTAAAGGTCTTGGAAAAGATCTGCAAGGTATATCGGCTCCAGTTGAAGCCACATTGAGGAAAGGGAGAGGAGCTATTGGTGCATATGGACCTGAAAAAGCTGCAataaaagcaaaaaaagaaGAGGAGCGACGTCTAAAAGAGAAAGCGGATCAAGAAAAAGCGGCAACACCGAAGACATATAATTGGAAGAAGTCGCACAAAGGACGCTACTTCTATAAGGACGCGGCAGATGTTATACAAGAGGGTAAACCCACGATGCATACTATTAGCAgTAACGAGCTATCCCGCGTGCCGGTGATCGACTTGACCGGGCGCGAGAAGCGCGTGCTCAGCGGCTACCACGCGCTCCGAGCTGCGGCGCCGCGGTACGAGCACGAGCCCCGACGCGAGTGCACCAACTTCGCCATTCCCGCGCTGACGCACAACCTGCAACTCATGGTCGAATGCTGCGAACAGgatataattcaaaatgctCGTGAACTACAACAAGCTGAGGACGAGATAGTTGTCCTGGAGAGAGATCTGGAGGAGTGTAACAAGACGATAGGTGATCAAGATGAAGTGATAAATAAAGTGCAAATGATCCTCATGAAAGTGGAGACGTTGAATAGGCCTGATGTCTCCCTGGAGACCTCGTATGAAGTGTTGGCCGACTTGAAGGAATCATCACCGCTAGAATACGAAATGTTCGGTCTGGGCCCCATAGGCGCCAACATAGCGAGCCCCCTGTTCAGCGCGTTGCTGGCCAAGTGGGATCCGCTGCAGAACCCTTCGGAACCAGTGGAAACGTTCCTAAAGTGGAAACCGTTGCTTACCGAGGAGTCTTACAATACATTGTTGTGGCAACACTTTGTGCCGAGTATTACCACTGCTTCTGAGGTGTGGAACCCGCGCGTGCCGGAGCCGATGCTGCGCGTGTTCGAGGCCGTGTACCCGCTGATCCGCTCGCGGCTGGCCAGCGCCCTAGCCGCCTGGCATCCGGCGGACGCGTCGGCCAAGCCGCTGCTGGCGGCCTGGCGGCATGCGTGGGGCGGAGCCCTAACGGCGCTCCTGCACCATCATATAGTGCCCAAGTTGGAGCATTGCCTGCAGCATGCGCCGTTGGAGCTCGTCGGCAGGGAGAATACGGCGTGGCTGTGGTGCGTGCAGTGGGTGGAGCTGGTGGGCGCGCCGGCGGTGGCGGCGCTGGCGGGGCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTCGCCGCCTGGCTCAACACGGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGAAAATGTTCCCACCCGAAGTGCTCAAAGAGCCGGTGGTGCGTGACGCGTTCCGGAAGGCTCTAGACATGATGAACAGAAGCACGGACATAGATGCCGTTGAACCACCCCCACCCCCACGGTTCACGATCACGGAAACAAAACCAGAGACCACCTCCAGGATAGCCGATGCCCTAGCAACTACCACGCAGAAGAGCTTCTCGGAGCTTCTAGAAACTAGATGCATGGAGAAGGGCATCACCTTCGTGCCAATCGCTGGGAAAACGAGGGAGGGAAGGCCGATTTACAAGATTGGCGACTTGCAGTGCTATGTTGTAAGGAATATAGTGATGTACTCCAATGATGGTGGCAGGAATTTCTCGCCGATCAGCATGGAGAAGCTATTAAAAATGatTGATCTCTTTATTACTGGCTACATCCAATAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRSRKAKREQQIYGVWAKDSDEDDNEDNVRQRSRKPKDFSAPIGFVAGGVQQAGKKKEKEEKQEVESAEASMSRPKFADSSDEEEVSNPAESETAGIRRAGQGMRPPNLGGNVGAWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATLRKGRGAIGAYGPEKAAIKAKKEEERRLKEKADQEKAATPKTYNWKKSHKGRYFYKDAADVIQEGKPTMHTISSNELSRVPVIDLTGREKRVLSGYHALRAAAPRYEHEPRRECTNFAIPALTHNLQLMVECCEQDIIQNARELQQAEDEIVVLERDLEECNKTIGDQDEVINKVQMILMKVETLNRPDVSLETSYEVLADLKESSPLEYEMFGLGPIGANIASPLFSALLAKWDPLQNPSEPVETFLKWKPLLTEESYNTLLWQHFVPSITTASEVWNPRVPEPMLRVFEAVYPLIRSRLASALAAWHPADASAKPLLAAWRHAWGGALTALLHHHIVPKLEHCLQHAPLELVGRENTAWLWCVQWVELVGAPAVAALAGRALLPRWLAALAAWLNTAPPHATVLASYTHFKKMFPPEVLKEPVVRDAFRKALDMMNRSTDIDAVEPPPPPRFTITETKPETTSRIADALATTTQKSFSELLETRCMEKGITFVPIAGKTREGRPIYKIGDLQCYVVRNIVMYSNDGGRNFSPISMEKLLKMIDLFITGYIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -