Zces000844.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- CM022616.1:4171810-4178091[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-11 6.4e-08 32.0 0.0 4 35 166 198 165 204 0.90
Sequence Information
- Coding Sequence
- atggatTTAGATTTAGTCAAACGTGAAAATGTGGAGATATTAGGACGCTGTAAGTGTTGTTTGGATGACGTTAATCTCCAAAATTTATGggaagaatattataatgatggTCAAGTGGAAGTTTTTGGCGCAATGCTTGAAGAATGCTATTCCTTGAGTTGGGAAAACAAAGatcaaaatgaatttatatgcAGTGCATGCATAGTGCGCTTGCGGGATGCTCTCAACTTTAAAAGGGAGATTATTGCATCTGAGCAAGTGCTTCAGCAAGTGGCattggaatttaaaaataatgttgctGTTGATATTAAAGTTGAATCTTCAGAAGACATTGATGAATATCATGAAGTAGAATATTTGGAGTTAGAAGTTGATAACTGTGCTGAAACTGAagCAAAAGGGACTGAGACATCAACAGAACCACCTAAACGTAAATGGCCGAAAAAGAGAAGAGGTGCAGATCGCTTAaaagtttacaaaaaatacaccCAACTTGAGCTAAGAGAAGCTATGGAGGCGGTGAAAAGTGGCAAAATGAGCCGTGCAGAAGCTGCTGAAATTTACAACATTCCTAGGAATACGATCAGcaacaatttgaataaatacaatgcaTTAATCGAAACTCAAAATGATTCCACTGAGGAAATTTCCAATAAAGAGAGGAATTTTAAGCTCATTGAAGAGATTAAAGCACTGCTAACATTAACAAATGCAACACCATTCAAAACCAAAACTGCGAAATACTATTGTGCATATTGTTCTACAGAAGGGCCTGTGTTTGAAGATGGTGCTGAGTTACGAATTCATACTATGAACGAACACAGTGAACATAGAACATACAATGTTGACCATTTCATGAGACCATACTGGCTCAATGAAATTCTCAAACTCGATGTTGACAACCTTACATGCAATTTATGTGACACAAAGTTGCCAGACTGGAATGGAATGTTCCAGCACTTTTCTAATGAACACGAAATTGAATTTGATGAAGCCTATACAAGAGTTGTCCCATATATAATAAGGGATAACATCAGATGTGTTTTATGTCATGAGTCATTTAATAACTTCCACCAGCTGGACGGCCACATGAATGCTCATTACAATAACTATATATGTTATGAATGCGGCGACACATTTGTAGCTGCTAGCAGATTAGAAAAACATGTTCAAGTGCATAGCAAGGGTAAATTCCCATGTGATGAATGTGGCAAAGTATTTTCACTGCAAAAGTACCGTGTAAAACATATCAATTTAGTACATCGAGAGAATGAAATAAAGTGTCAGTTTTGTCCTGAAAAATTTAGATCTACATTGCTGCGACAGTTGCATTATGGTGAAAAGCATAAAGATCAAATCAAGGAATATACGTGTGAGTTCTGTGGTACagtgtttatttgtaagccaactttcataaaacatttgcAAAGGAAGCATAGCATTGATAAGAAGAACAAATGTGAATTGTGCGATAAGgcatttattaagaaatatgaatTACGTCTCCACATGTTGCGACACAAgcaaaataagaaatacatgTGCACCGTTTGTGGTGAAGGTTTTAGGaaaaaagcaaattttaagcatcattttaaaattcatcagAAAGCCAATGCTGaacaaattatgttaaatgaataa
- Protein Sequence
- MDLDLVKRENVEILGRCKCCLDDVNLQNLWEEYYNDGQVEVFGAMLEECYSLSWENKDQNEFICSACIVRLRDALNFKREIIASEQVLQQVALEFKNNVAVDIKVESSEDIDEYHEVEYLELEVDNCAETEAKGTETSTEPPKRKWPKKRRGADRLKVYKKYTQLELREAMEAVKSGKMSRAEAAEIYNIPRNTISNNLNKYNALIETQNDSTEEISNKERNFKLIEEIKALLTLTNATPFKTKTAKYYCAYCSTEGPVFEDGAELRIHTMNEHSEHRTYNVDHFMRPYWLNEILKLDVDNLTCNLCDTKLPDWNGMFQHFSNEHEIEFDEAYTRVVPYIIRDNIRCVLCHESFNNFHQLDGHMNAHYNNYICYECGDTFVAASRLEKHVQVHSKGKFPCDECGKVFSLQKYRVKHINLVHRENEIKCQFCPEKFRSTLLRQLHYGEKHKDQIKEYTCEFCGTVFICKPTFIKHLQRKHSIDKKNKCELCDKAFIKKYELRLHMLRHKQNKKYMCTVCGEGFRKKANFKHHFKIHQKANAEQIMLNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358491;
- 90% Identity
- iTF_01562316;
- 80% Identity
- iTF_01562317;