Zces011763.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- CM022609.1:9062691-9068809[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 1.7e-07 30.7 0.0 4 39 164 200 161 204 0.90 2 4 6.9e-13 7.9e-10 38.1 0.1 1 39 215 253 215 256 0.94 3 4 2.7e-16 3.1e-13 49.1 0.1 2 45 271 315 270 315 0.96 4 4 4.7e-19 5.4e-16 57.9 0.0 1 44 322 366 322 367 0.95
Sequence Information
- Coding Sequence
- ATGCCTGGCTACGGACCGTCTCAAGTAAAGTGTGAACCGCCGTCTGACGAAGAAGACAATTCGCAATTTGGAAAACACTATAATACGGAACTACATCCTATAAAATTAGACCCAGATTCACAATTCGAGGATAATGTTGCGACACATTTATTGGATCAATTACAGTTCACCTCGGAGCTGGTACCAGTGCCCGCTGCTCCAACAGCAACACCAGTCCGGGAGGACCTGCCAGCACCCCACGAAACCTCCCTTGCAATGTTGCAACCAGCTAAGAATACTACATTGGGATCGGCGTTAATTGATAAGCATTTGTCTATGTCAAGTACAAATGAAATCCTGGATTCATCTGATTTTGCTCCTCTTCTGTCTATCAAAGATGAACCGCTATCTGAAGGAGAGAGTCAGCAATTAAGTGGTGATGAGACTAGTGAATGCAGTAGTACTCCAGAAGTGAGCAGCAGAGGTGCCCCAAAGACGTGGTCTCAGAAGGACATGGAAAAAGCTTTAGATGCGTTGAAAAATCACAACATGAGCCTAACTAAAGCTTCTGCAACATACGGCATACCATCTACGACACTATGGCAGCGCGCCCATCGCTTGGGAATCGATACTCCGAAGAAGGAAGGAGCGTCTAAAACGTGGAGTGAAGAGGACCTAAAGGGAGCTCTGCATGCTTTGCGGACTGGGGCTATATCGGCTAATAAAGCTAGCAAAGCTTATGGCATCCCCAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGGCTGGCCGCGCCGTTCAACGCGGCGCCGACCGCGTGGCGCCGCGCCGACCTGCAGCGCGCGCTCGACGCCATCCGCTGCGGCGCCGCCTCCGTGCAGCGCGCCGCCTCGCGCTACGGGATACCCACcgGCACTCTCTACGGACGGTGCAAGCGCGAAGGCATCGAGCTCTCCCGCTCCAACCCCACGCCCTGGTCAGAAGATGCGATGGGAGAAGCACTGGAAGCTGTCagAGTGGGTCAGATGTCAATAAACCAGGCAGCCATACATTACAACCTTCCGTACTCCTCGCTGTACGGCCGCTTCAAGCGCTGCAAGTATCAGGTCTTGCAAGAACCACAAGCACTACCAGAGAATAAACCAGAAGAGCGGCCTGAGAGGCAACACCAAGAGTTCCATTACCCAGTGCCTCTTAACTACGATTCCGAGTATATGGGAGAAGTGTCCTCAATGCAAAGCCTGCAGGAACATTACAGCCAAGCTATGTACTACGCGCAATGCAATGTTACCAGCTGA
- Protein Sequence
- MPGYGPSQVKCEPPSDEEDNSQFGKHYNTELHPIKLDPDSQFEDNVATHLLDQLQFTSELVPVPAAPTATPVREDLPAPHETSLAMLQPAKNTTLGSALIDKHLSMSSTNEILDSSDFAPLLSIKDEPLSEGESQQLSGDETSECSSTPEVSSRGAPKTWSQKDMEKALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKTWSEEDLKGALHALRTGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALDAIRCGAASVQRAASRYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQVLQEPQALPENKPEERPERQHQEFHYPVPLNYDSEYMGEVSSMQSLQEHYSQAMYYAQCNVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114860;
- 90% Identity
- iTF_00357344;
- 80% Identity
- -