Basic Information

Insect: Zelleria hepariella
Gene Symbol: L
Assembly: GCA_949319315.1
Location: OX439382.1:7555434-7561239[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.71 39 5.4 5.8 1 23 3 25 3 25 0.97

2 16 9.5e-06 0.00052 20.7 4.1 1 23 31 53 31 53 0.99

3 16 2.9e-05 0.0016 19.2 0.1 1 23 59 81 59 81 0.98

4 16 0.00012 0.0068 17.2 0.1 2 23 95 117 94 117 0.96

5 16 4.3 2.4e+02 2.9 0.1 9 23 148 163 144 163 0.93

6 16 0.32 17 6.5 0.1 3 23 219 239 218 239 0.97

7 16 0.012 0.67 10.9 0.0 2 23 254 275 253 275 0.93

8 16 2e-05 0.0011 19.7 1.0 1 23 283 306 283 306 0.94

9 16 0.013 0.7 10.9 0.1 1 23 311 334 311 334 0.92

10 16 0.022 1.2 10.1 0.0 1 23 395 420 395 420 0.94

11 16 0.00079 0.043 14.7 0.0 2 23 470 491 469 491 0.96

12 16 0.065 3.6 8.6 0.0 1 23 499 521 499 521 0.98

13 16 2.1 1.1e+02 3.9 0.7 2 23 529 550 528 551 0.93

14 16 1.9 1.1e+02 4.0 0.3 1 23 629 651 629 651 0.93

15 16 0.0011 0.058 14.3 0.2 1 20 659 678 659 681 0.95

16 16 0.08 4.4 8.4 0.3 1 23 688 710 688 710 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.71	39	5.4	5.8	1	23	3	25	3	25	0.97
2	16	9.5e-06	0.00052	20.7	4.1	1	23	31	53	31	53	0.99
3	16	2.9e-05	0.0016	19.2	0.1	1	23	59	81	59	81	0.98
4	16	0.00012	0.0068	17.2	0.1	2	23	95	117	94	117	0.96
5	16	4.3	2.4e+02	2.9	0.1	9	23	148	163	144	163	0.93
6	16	0.32	17	6.5	0.1	3	23	219	239	218	239	0.97
7	16	0.012	0.67	10.9	0.0	2	23	254	275	253	275	0.93
8	16	2e-05	0.0011	19.7	1.0	1	23	283	306	283	306	0.94
9	16	0.013	0.7	10.9	0.1	1	23	311	334	311	334	0.92
10	16	0.022	1.2	10.1	0.0	1	23	395	420	395	420	0.94
11	16	0.00079	0.043	14.7	0.0	2	23	470	491	469	491	0.96
12	16	0.065	3.6	8.6	0.0	1	23	499	521	499	521	0.98
13	16	2.1	1.1e+02	3.9	0.7	2	23	529	550	528	551	0.93
14	16	1.9	1.1e+02	4.0	0.3	1	23	629	651	629	651	0.93
15	16	0.0011	0.058	14.3	0.2	1	20	659	678	659	681	0.95
16	16	0.08	4.4	8.4	0.3	1	23	688	710	688	710	0.94

Sequence Information

Coding Sequence: ATGCCGTTTCGCTGCGAGTTCTGCTCGCGGCTGTTCAAGCACAAGCGCTCCCGCGACAGACACGTGAAGCTTCACACGGGGGACCGCAAGTACCGCTGTGCGCACTGCGAGTCCGCCTTCTCTAGGAGCGATCACCTGAAGATCCACATGAAGACGCACGACAACCAGAAGCCGTTCCAGTGTACGGTGTGCAACCGCGGCTATAACACGGCGGCGGCTCTGACGTCACACATGCAGGGCCACAAGCGCGACAGGGCGGAGCCCGAGCGGCGGCGGGCGCTGCGCTGCCTTCGCTGCGGCGACGCCTTCCGAAGGCCTGACCTCTtacagGCTCACATGATGACAGCCCACAGCATAGACTCAGCGGCCCTGACACCACCTCGACGAGTGGCTTCACAACCACCCCCAACGCTGCTGGCTTGCATCTACTGCACTCGCGACACCTTCACTAGCATGGACCAACTGCAGCTGCACGTTAGAGCGGTCCACTCCGCACTGATAAACGGAGACGCGCATTCAGATACATCGGCCCCTCAGCCAGCGCCGACCGATCTGAGCAGGAAAGGCCAAGAGGAGGCATCACCTCCGAAGCGTCCCAGAACAGACTCTGGAACAGGAACCCCTCAACTTGCGCTCTCTCCTAGTACGCTTCTGTGCAACCAATGCGACGCAGCGCTACCGGACTTTGAGTCTTTTCGGGTGCATCTTAAAGGTCATCTGGAGGAGGCCGGTGGAGAGTTGGGTCGGTCAAGTCCGACTCCGTGTCCGCATTGTGGCGCGACCTTCGCCGAGGCCGCCGCGGCGGAGCGTCACCTCGCTGCCCACTACTTGGCCGCGTCTTGCGAGTACACGTGCCATAGTTGCACCAGAAGCTTTCCGTCGCCGGATGATCTCCAGAAGCACCTCCTGGATTTGCACGCGCATCATCTCTACCGCTGCTCCTTGTGCAAGGAGGTCTTCGACTCGAAGGTCGCTATTCAGGTCCACTTCGCGGTCGCGCACAGCGGCGAGAGCAAGGTGTGGATCTGCCGTGCGTGCGGGCCGGGGCAGGGCGCCGCCCTCCGCTCGGAGGCCGAGGGCGCCGCCCACGTGCGCGCGCGCCACGCCGCCCGCCGCTGCGCTTGCGGCGCGGTGTTGGCTGGAGAAAGAGCCTTGAGGGCACACGCGGCCGCCCATGCGCATTATAGGTGTCCGGCCCCCGCCTGCCCCGATACCTTTGCCGTCCAGTATCTGCTAGAGAGACATATGCAAGCGCAGCACGCAACCACACCGGGCATCAACGGCGAGTCCGCCCGCGCCAAGCGTCTGGACAACAACAACGCCCCCGTGGCCGACGGGAACTGCTCTCCTTGCACGACCGGCCCCAACACTGAAGAACGCAGGCGCAAGAACGGAGCGGTCGCCCTGCAGTGCGCTTACTGCGGGGAGAGGGCTAGGACGAGAGCGGAACTTGAGGCCCATACGAGGGCGCATTCTGGGGCAGCCGCCGCAAGACATAAGTGCCTCATTTGCGACGAGGTTCTACCCTCCGCTGCGGTGCTGGCAGAGCACAAGCTGACGCATTGCAAGGTGGTCGCCGGAGACACGTGCGCCCGCTGCCGCGCGAGGCTGCCGTCCGAAGAGTCGTTCCTGAGCCACATGGCGCGCCACCACCCCGCGCTGCCGGCGCCGTGCGTCGTCTGCCGACAAACACTCGCGTCAGAGGCGGAGGCGAGGCTCCACGCCCGCTTCCACCTCCGGACGTCAGGTGACGAGAAGAGATGCGCGATTTGTCTGAGAGCTCTCCCAGAAGGCGAGACAGGAGGCGAGGGGGCGCGAGCTTGCTCCTCGTGCTACGCCCGCCACGCCGCTACGACCGCCCCGAGGCCACCGCTTCCAACAGAGCACGACTGTCGTCTGTGCCGTCGCGGGCTCGGGTCCCCGACGCGCCTGCAAGCTCACCTCATCGAGCACACGTTCGCAGGCATCGGAGCCTTCACCTGCTATCTTTGCTCGGCTGTATTCACCAGCGCGAGCGGCTTGCAGCGCCATCTGCCGGAGCACGCGGCAGCGCCGCGGCCCTACGACTGTGCCCAGTGCGGATTAAAGTTCTTCTTCCGCGCTGAGCTGGACAACCATGCGTTCGTGCATCTCGAAGAGGCGGAGATAGCGCAACGGGCTTTCTACGAAGCGTACGCAAGGGGAGCGGCGTGGGCGGCCTTGGCGCCGCAAGAGCCCCCGCCGTCCACTCCGGCGCCCTCGGCTGAGCCTCGGGTCAAGAATGAACCGGAAGTCAAAGAGGAGAGGAACAATGATGAGTACATCGAGGTGTCctctccgccgccgccgccgccggtccCCACGCCCCCGCCCGTCGTGAAGCAGGAGGAGCCTGACGAAGACTGA
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDRAEPERRRALRCLRCGDAFRRPDLLQAHMMTAHSIDSAALTPPRRVASQPPPTLLACIYCTRDTFTSMDQLQLHVRAVHSALINGDAHSDTSAPQPAPTDLSRKGQEEASPPKRPRTDSGTGTPQLALSPSTLLCNQCDAALPDFESFRVHLKGHLEEAGGELGRSSPTPCPHCGATFAEAAAAERHLAAHYLAASCEYTCHSCTRSFPSPDDLQKHLLDLHAHHLYRCSLCKEVFDSKVAIQVHFAVAHSGESKVWICRACGPGQGAALRSEAEGAAHVRARHAARRCACGAVLAGERALRAHAAAHAHYRCPAPACPDTFAVQYLLERHMQAQHATTPGINGESARAKRLDNNNAPVADGNCSPCTTGPNTEERRRKNGAVALQCAYCGERARTRAELEAHTRAHSGAAAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCARCRARLPSEESFLSHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRTSGDEKRCAICLRALPEGETGGEGARACSSCYARHAATTAPRPPLPTEHDCRLCRRGLGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSASGLQRHLPEHAAAPRPYDCAQCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAAWAALAPQEPPPSTPAPSAEPRVKNEPEVKEERNNDEYIEVSSPPPPPPVPTPPPVVKQEEPDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545077;
90% Identity: iTF_01545077;
80% Identity: -