Zhep019597.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zelleria hepariella
Gene Symbol
-
Assembly
GCA_949319315.1
Location
OX439394.1:8062249-8077490[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.00014 0.0075 17.1 0.1 3 23 128 148 127 148 0.97
2 19 1.2e-06 6.8e-05 23.5 1.2 1 23 154 176 154 176 0.99
3 19 7.8e-06 0.00042 21.0 2.7 1 23 182 204 182 204 0.99
4 19 4.3e-06 0.00024 21.8 2.2 1 23 219 241 219 241 0.98
5 19 0.00021 0.011 16.5 0.6 1 23 256 278 256 278 0.98
6 19 7.1e-05 0.0039 18.0 3.1 1 23 293 315 293 315 0.98
7 19 4.9e-07 2.7e-05 24.8 1.5 1 23 330 352 330 352 0.99
8 19 0.00022 0.012 16.4 2.8 1 23 358 380 358 380 0.98
9 19 0.00059 0.032 15.1 0.1 1 23 387 409 387 409 0.99
10 19 1.5e-06 8.2e-05 23.2 2.3 1 23 415 437 415 437 0.99
11 19 0.05 2.7 9.0 1.8 1 23 489 511 489 511 0.98
12 19 8.4e-07 4.6e-05 24.0 2.3 1 23 517 539 517 539 0.99
13 19 0.058 3.2 8.8 1.8 1 23 546 568 546 568 0.98
14 19 3.4e-06 0.00019 22.1 1.5 1 23 574 596 574 596 0.99
15 19 0.022 1.2 10.1 0.8 1 23 603 625 603 625 0.99
16 19 3.8e-06 0.00021 22.0 1.9 1 23 631 653 631 653 0.98
17 19 0.0028 0.15 13.0 0.3 1 20 659 678 659 681 0.93
18 19 5.3e-05 0.0029 18.4 1.4 2 23 688 709 687 709 0.96
19 19 4.9e-06 0.00027 21.6 1.4 1 23 715 738 715 738 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCAGCAGATCAAGGCTGAGCCTATGAGCTTCTACACCCACCCGCACGTCCATTCGGGGCCTGGCACAATCATCCGCTCCGACTCGGGCCATGGGATCCTCAACATGCACCACCCGCAGGAGGACTCCAAGGACAGCCTCATTGTGCAACAACACGTCCAGCACCAAGACTTGCTCGACCACACGCAGCAGGAGATGCAGCAGCATGATCAGGATGAGTTGAGCTTCAAAGGAATGGAAGATGAGGGGGTTGAGATGGAGATGGACAGTAGACAGTGTTCTCAGGGGATGGGCGTCGACATGGGATCGGTACAAACAAAAATGGAAGTGCCCAATGGTGGTACCCAGTCCGCGCCACGTTCTAAACCGCAAGCCTGTAAGGTTTGCGGCAAAGTACTATCATCAGCCTCCTCATATTATGTCCATATGAAGTTGCATTCAGGAAACAAACCATTTCAGTGCACTGTTTGCGACGCGGCATTTTGCCGCAAGCCATATTTAGAGGTGCACATGCGAACGCATACGGGCGAGCGCCCCTTCCAATGCGATCTGTGCCTCAAACGCTTCACGCAGAAGTCCAGTCTTAACACGCACAAACGGGTTCACACCGATGAGCACATGCGGTCACTGATGGTGAAGGACCGGCCCTACCAGTGTGAGCTCTGTCAGATGCGCTTCACTCAGAGCTCCAGCCTCAACCGCCACAAGAAAATACACACGGAGGAGCACAGGCGCGCGCTGCTGGCTAAGGACCGTCCCTACCAATGCGGCGTGTGCTATGTGCGCTTCACGCAGAAGTCGAGCCTCGGCCGACACGGCAAGATACACACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACTCAGAAGTCCAGCCTGGGCCGACATGGGAAAATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAGTGTGACATCTGTGACAAGCGGTTCACGCAGAAGTCGAGTCTTGGCACTCATAAGCGTATACATACTGGGGAGAGACCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTGCACGAAAAAATACATACGGTGCAAGGGCGTCCTTTCACGTGCGGGCAATGCCCGGCGGCGTTCGCCCGTCGACCCTACCTGGACATTCACACCCGCACGCACACAGGCGAGCGGCCCTATCAGTGCGACGTGTGCCTCAAGCGCTTCACGCAGAAGTCGAGCCTCAATATACATAAGCGGACACACACAGGTGGGTCTCGCCGCGGGGCGGACTGGCGCGAGCTCGCCCGCTGCCAACCGACCGACCGACCACTCCCGCACAAGCTCGCTCTCTCTCTTAGTGCTTTGGCTGTAGACTCGCGTGCGCTGGATGTTCGACCGAGTGTCCAGGGCAGACCGTTCCAGTGCCTGTCGTGCCCGGCTGCCTTCACCTGCAAGCAGTATCTGGAGATCCACACGCGCACGCACACCGGCGAGCGGCCCTATCAGTGCGACATCTGCCTGAAGCGCTTCACGCAGAAGTCCAGCCTTAACATCCACAAGCGGACGCACTCAGTGCAGGGGCGGCCGTTCCAGTGTCTGCAATGCCCCGCCGCCTTCACCTGCAAACAGTATCTGGAGATACACAACCGGACCCATACAGGCGAGCGGCCCTACCAATGCGATGTCTGCCTCAAGAGATTCGCGCAAAAGTCCACACTCAACATACACAAGCGAACGCACACAGTGCAAGGCCGTCCGTACCAATGCATGGAGTGCCCCGCCGCGTTCACATGCAAGCCGTACCTCGAGATCCACAACCGCACGCACACGGGCGAGCGGCCCTTCGAGTGTGACGTCTGCTATAAGCGGTTCACGCAGAAGTCCACGCTCAACATTCACAAGCGCATTCATACCGGGGAGCGTCCGTATGCCTGTGATATTTGTCAGAAACGCTTTGCCGTGAAGAGCTATGTAACAGCACACAGATGGTCCCACGTGGCGGACAAGCCTCTAAACTGCGACCGCTGTTCGATGACGTTCACGTCCAAGTCGCAGTTCGCGCTCCACATCCGCACACACTCGAGCGGATCCTGCTACGAGTGCAGCGTCTGCGGACGCACCTTCGTGCGGGACAGCTATCTCATACGACATCACAACCGAGTGCACCGCGAGAATCATAGCAACGTCTCCGCAAACAGCATAGGAACCATCAACAGCGTCGCAACCAACACCAATAACTCTAACAGCAACTACGACTCGCCCGGCGTTTGTGACTTAAGcTTCGTACCCATGGTAAACCGATACATGACGTCACAGGGTACTCAGGTATCGATGCAAGATACAAGCAAGATGTCGGCAATGTCGCCGCAATCCATCGCTTCTATATCTTCGCCACCTCCCCCGCACACACCGACGCCCCAGCCACAGATGTCGGGACAAATGCATCTGGCCGACTGA
Protein Sequence
MFEQQIKAEPMSFYTHPHVHSGPGTIIRSDSGHGILNMHHPQEDSKDSLIVQQHVQHQDLLDHTQQEMQQHDQDELSFKGMEDEGVEMEMDSRQCSQGMGVDMGSVQTKMEVPNGGTQSAPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRSLMVKDRPYQCELCQMRFTQSSSLNRHKKIHTEEHRRALLAKDRPYQCGVCYVRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFTCGQCPAAFARRPYLDIHTRTHTGERPYQCDVCLKRFTQKSSLNIHKRTHTGGSRRGADWRELARCQPTDRPLPHKLALSLSALAVDSRALDVRPSVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHNRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHSSGSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTINSVATNTNNSNSNYDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTSKMSAMSPQSIASISSPPPPHTPTPQPQMSGQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246112;
90% Identity
-
80% Identity
-