Zhep010378.3
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949319315.1
- Location
- OX439384.1:8542340-8556744[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.8e-63 4.6e-59 200.6 18.2 1 221 122 338 122 347 0.91 2 4 0.014 1.1e+02 2.3 0.0 200 222 361 383 338 390 0.81 3 4 2.2e-14 1.7e-10 41.1 6.4 203 280 406 482 396 494 0.82 4 4 1.8 1.4e+04 -4.6 10.6 130 172 503 545 495 569 0.57
Sequence Information
- Coding Sequence
- ATGGGGCGGAGCTCCGAGCTCGTCATGACCGACAACAGTGACGAGGAGAGTGGCGAAGCCTTCACTGATGGAGACTTCGGCGACTCTGACGAGGACGATGCCGTTTTAGAGCACGTCGCGGACTCCAACGGCGTCCCCGTTAACGAGACTATGAACACAGAATTGAAGACCAATGGTGAAATGAACGGTGTGCACGAAACAGACGGTTATAGACGTAAGAGCAGTGTTAACGGACTGAATGGTGATACCAATGGActgaataataacaataaaggtGAAAATGGTGTGCCTGAGATCCGGAGAGACTCTCACGGTGATTTGAATCCGTCAATTGTTGGAATAATTGGCGATCAACATGGATTTGCGGAACAACGGCTGGCCGCGCGACGCGCAGCGAGGGCGGAGGCGCGAGAGATTCGCATGCGAGAGCTCGAGCGGCAGCAGCGGGAGCAAGAGGACCATGCCGACAAGGCTTACGATATGTACGCAGAGACGGTcacgcggcgcggcggcggacGGCTTGCGTCGCTTACACCGGCGGCGCTGCACTCGCCGCGACGCAGCTCCGAAGACTCTCTCGAAGAGAGCTTCAGCCTCAAGGAGCTCCGGCACGAGCTCAAAGAGGTCGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTCGACAATGACAAGGCGGCGCTCGGCTACCAGCGGGAACTACTCAAGGACCGGATAGAGGAGCAGCGGGAGGAGATGGCGCAGCTACAGCGCGAACACAAAGAGAAGTGCTCGGCGCACGAGCGTTTAAAACGCGAGCACGTGTCCCTCGAGCGCGAGTTAGAGGCGGCGCGGGACGCGGTGCGCGCGCgggacgccgccgccgccgccgccggacgCGCCTTCGTCGAAGCTACGCCCGAGACTGCGCCGGAGTTGGAGGGAGCCAGCTTTGGGACGTGTCCGCCGCTGGCGCTAGTTTCGCGCGACTCTGAGCAGCTGCTCAATGATGCCGGAGAAGGAACCTTAGTGCTGTTCGTCGAAGCGACGCACGAGACCGCGCCGGAGTTGGAAGGAGCCAGCTTTGGCACGTGTCCGCCGCTGGCGCTAGTGTCGCGCGACTCTGAGCAGCTGCTCAATGATGCGGGAGAAGGAACCTTGGGCTACAAGTGCTATTTGTTGATACGCCCCGAGTTGGAAGGGGCGAGTTTCAGGACGTGTCCGCCGCTGGCGCTAGTGTCGCGCGACTCTGAGCAGCTGCTCAATGATGCGGGAGAAGGAACTTTACACGTCCGATTGCAGAAGCTCCTCGGGTCGAAGCAGTCGCTGGAGTCCGAAGTGCGCAAGCTGAAGCTGCAGCTGAACGACGAGCGAGCGGCGCGACAGAACGGGCAGGCCAGCCACCACGACCTCGAGTTTGAGAATGAACTGGAGTCGCTCCGCAAGTCGCAGGCGGAGGCGAAGgcgcgcgcggcgcgggcggaggcggaggcggcGCTGCAGGGCGCGGCGGTGGCGCGGCTCGAGGCGCAGGTCGCCCGGCTGAGGGCGCAGCACGAGGCGCAAGACTCGCAGGAGGAACAGCTCAAGCAGGAGAAGAGGCGGCTGCAGCGGGAGGCGCGTGAGGCCCAGAACCGCGTGGAAGAGCTGGAGACGGAAAACAGCCACCTCATCAAACGGCTGGATAAGCTCAAGAACGCCAAGTCGGCGCTGTTGAAGGAGCTGTGA
- Protein Sequence
- MGRSSELVMTDNSDEESGEAFTDGDFGDSDEDDAVLEHVADSNGVPVNETMNTELKTNGEMNGVHETDGYRRKSSVNGLNGDTNGLNNNNKGENGVPEIRRDSHGDLNPSIVGIIGDQHGFAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVTRRGGGRLASLTPAALHSPRRSSEDSLEESFSLKELRHELKEVEEKFRKAMILNAQLDNDKAALGYQRELLKDRIEEQREEMAQLQREHKEKCSAHERLKREHVSLERELEAARDAVRARDAAAAAAGRAFVEATPETAPELEGASFGTCPPLALVSRDSEQLLNDAGEGTLVLFVEATHETAPELEGASFGTCPPLALVSRDSEQLLNDAGEGTLGYKCYLLIRPELEGASFRTCPPLALVSRDSEQLLNDAGEGTLHVRLQKLLGSKQSLESEVRKLKLQLNDERAARQNGQASHHDLEFENELESLRKSQAEAKARAARAEAEAALQGAAVARLEAQVARLRAQHEAQDSQEEQLKQEKRRLQREAREAQNRVEELETENSHLIKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -