Zalb005654.2
Basic Information
- Insect
- Zele albiditarsus
- Gene Symbol
- L
- Assembly
- GCA_958496275.1
- Location
- OY292410.1:13215615-13222086[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.4e-06 0.00012 22.2 1.4 1 23 99 121 99 121 0.98 2 17 0.41 35 5.1 3.9 1 23 127 149 127 149 0.97 3 17 6.6e-07 5.6e-05 23.3 2.3 1 23 155 177 155 177 0.99 4 17 6.9e-05 0.0059 16.9 0.8 1 23 183 205 183 205 0.98 5 17 0.0012 0.1 13.0 0.3 2 23 360 382 359 382 0.93 6 17 0.34 29 5.3 0.2 2 23 393 415 392 415 0.88 7 17 0.32 27 5.4 0.1 3 23 482 502 481 502 0.97 8 17 0.0019 0.16 12.4 0.3 2 23 515 536 514 536 0.97 9 17 0.0068 0.58 10.7 3.1 1 23 545 568 545 568 0.90 10 17 0.7 60 4.3 1.2 1 23 573 596 573 596 0.91 11 17 7.1 6e+02 1.2 0.3 1 13 603 615 603 617 0.82 12 17 0.84 72 4.1 4.5 1 23 672 694 672 694 0.97 13 17 0.07 6 7.4 0.9 1 23 699 722 699 722 0.93 14 17 0.61 52 4.5 0.3 2 23 778 801 778 801 0.90 15 17 0.00058 0.05 14.0 1.8 1 23 835 857 835 858 0.94 16 17 0.00014 0.012 15.9 0.2 1 23 867 890 867 890 0.94 17 17 0.00088 0.075 13.4 5.0 1 23 1116 1138 1116 1139 0.95
Sequence Information
- Coding Sequence
- atgttGTTCAAGGGAAATAGTTCACGTTTGGAATTTCTCATTGAACGAATTCAAGCTCACAAAGAATCACCGTCACCACttcttgatgaaaaatgtaattcacGATCAAAAGaAGGAGCTCCTGCTAATGGGAGTTTTTCATGGCGTAGCGAGGAAGATAGTCTAACATGTCAAAGAGGTGGTGGTACACCTTCATCATGCACAACATCGACATCCATGAGCTTTGCATCAGAACCGGATGTTGATATTGATGCATCACGCATGGGAATTGATGTGAGCAATCCATCGGGTCCTTATCCCTGTCAATTTTGTGACAAATCATTTCCAACATTgagttatttgaaaaaacatgagcagACTCATGGTGATCAAATGCCGTATCGCTGTAGTTGGTGTGCGCGATTATTCAAGCATAAACGTAGCAGAGATCGTCATGTAAAATTACACACTGGCGATCGAAGATATCGCTGCACGCAATGTGAAGCAGCATTCTCACGCAGcGATCACTTGAAAATCCATATGAAAACTCATGACAATCAGAAGCCCTATCATTGCAGTGAGTGTTCACGTGGTTACAATACAGCTGCAGCATTGACATCACACATGCAATCACACAAACGTCCACAatcatcaaataatcaatatataaaaacaattaatgatGATTTACGGAGTGCATCATGGCcaagtggtggtggtggtggtgcatcATCGCCAAATATAAgcacatcatcatcatcatttacaaatattcCATTGTCATTGATgcgtaaaaaaatttcactgagTTATTCACCGGATCCAACAGTCAATGAACACACCAATACTCCatttataaaatcatcaatGACTTTGGCTTGTATGTATTGCGCTAAAGATACTTTTACAAGTATGGAACAACTTCAACTTCATGTAAATGCAACACacgaaacaattttaaatggtAAAAGTCCATTGACACCACCACTGGACGCCACCGATTACACATCAAAACGTTCAAGAAAAAAACGTGATGAGTTGGAAttaagaacaaaaatgaaaataaaaactgaaGGAGATGTCAATGATGATATGTtgatttgtaaatattgtccaatgaaatttacaaaaattatttcacttcgCAATCATATGACTGAAGTACATCAGGATGATATTAATACAGCTCCATTTCTATCATGTCCATTGTGCGATTTACCTTGCACTTCAACTGCATCCTATGCAGAACATTATGTCCTTGAACATTGTGAAAATCCTAAAGttccaattgaaaaacatCAACGTACAGATGAGACATCAATGGCAGCTGCAACATCATAtcaggaaacaaaaaaaaaagaatcacaaTGTCAAAGTTCTGCCAATAGTCATCAAACCAAAGATTATGCAATAGAAAATTCacgaacaaataatattgataattattcatcaaatactTTGCTTTGTGGACAATGTGGTGCTGCATTGGAGAACTTTGAATCATTTCGAACACATTTGGCAATGCATCTTCAAgcaaataatcaaatgaaattgaatgcaaTACGTTGTCCAAAatgtgatttaatttttcaaacttaTGACGATATGATTAATCATTTGACAAAACATTATCATGGACAACCAACGAAACAATATTTATGCGATTcatgtgataaattttatcataactCTGATTCATTGAAGAAACATCTCTTTGAGTCACACGctcatcatttatatagatgtacTCTCTGTCACGATACATTTGACTCGAGCATTGCCATTCAAGTGCATTTCACCGTGAAGCATATGCATGAgtgtaatgtatataaatgcagtGGATGCAGCATAAATTCAAGAGATAAAGAAGAGTCTCATGAGAGTACATTAGGGATGAGTGGTAGTGTCTTTAAAAGTGCTGCAGAAATGATGAAGCATGTGACAAATGTACATTTACCAAAGAATTCACATATGAATGAACTTTCATCACCGGGAAATGCTGTCTCGACACCGGCAGGTGTCATTGGTGAATTGCATCGATGTTGCTTTTGCGGTATTTATTGTACCTCAGACGTAGATCTACAATTACATCTTGCAAGTCATTCAACTTGTCTTTATCGATGTCCAATATGTCGCGAGGGTTTTGCTGTTGGATTTTTACTCGACAAACACATTGCTCATTGTCACAGTGTCATTAAACATGACACAGTGGAGAGTAAAAATTTGTACTGTCCATTGGAGCAAGATGAGaaggTAAGAAATAAACGAAGACGTTCgccaaatatcaataataattttaatcaatcgGAGAATGTAAAACGTCAAATACGAAGTggtattatgaattataatcgCTGTGAATATTGTGAGAGAACAGATTTTTCAAGTGATGCTGAATTGCGTGCACATAAAAAGCTTGTACACAAAATAGCTGCAAcgacaacagcagcagcagcagcagcaacaacaacaaccacaacaCCATTGAATACGAAATTACAAACGAAATTACAACTGTCACAGCATATTTGCAGTTATTGCGGTGAAAGTTTGCGCTCACGATTGGAATTAGAGGCGCACACTCGACTGCACCATGCGCCAAATGAATCGGGAAAACGTTACAAGTGCAATATATGTGATGAAGTATTTGGCAGTAGTGGTACATTAGCTGAACACAAATTGCAAAAACattgtagaataaaattgagcGATGTGTGCATTGTTTGTCgtggtgaattaaaaaatgaaacagatttttttcatcatgtacAAAAACACAGTTTAGAAGAATTTGATCCACAAAATCAGCGTGGTGATAACAATGCAATGTCACATATAACAGCGCATTGTGTTGTATGCAGGCAAACATTGATTAGCGAATTGGAATGTCAACTTCATGCTAAATatcatttacaaaataatataattaacaatggcacagataaaattcaatgttgtTGCATTTGCCTTCGTGAATTTGGCGATGAGggaaatgcaataaatatattgtcaaaATGTATCACGATGAGCGAACAACAATTGAAAGTTTGTAAACGTTGTTATATAAGACATTCGCAGGGATTACCAATATTGGGTTCACTCGCTGatgattttgataataattggaGTGCAATTGGATTGAATGTTgatggtaataaaattaatgatgtttcaaatgaaaatgaaattaataacattatggataataatgaaattaacaacgttaataataatgaatgcaaaatagatttgattaaatatgaaggttatgatgataataatgatggtaGTTGTgatgaaggagaaaataatatgttgGATTTTGATAAAGATACAGTGAATGTAAACAATTCTGGCGTCCGTCCATATAGCTGCAATCATTGCACCATTAAATTCACCTTTAGAACTGAACTGGAGCGTCATGTTACCATTCatcatgacaataataatggcCCGgtggcttcttcttcttcttctatcaGCTCATCAACATTGCCATTCAGCATTCAACAAGAGACATTGGCAGGTCATTCACAAACTCTGGAGGACAATAAGTCGTTAGACAATGTTATTGTTAAGGAAGAGATTTTAGTTAATCCAGATGGTGATGATGAGGCAATAGATGATGAAGCAGGTGAAGAAGAGgaggaaaatgatgatgatgatgatgatgatgatgaagaaggagaagagGTGGAAGATGATGTggagaataatgatgatgacaatggtgatgataagaataatgatgaacatTCAGTGATAGCGaacgaaattaataattga
- Protein Sequence
- MLFKGNSSRLEFLIERIQAHKESPSPLLDEKCNSRSKEGAPANGSFSWRSEEDSLTCQRGGGTPSSCTTSTSMSFASEPDVDIDASRMGIDVSNPSGPYPCQFCDKSFPTLSYLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCSECSRGYNTAAALTSHMQSHKRPQSSNNQYIKTINDDLRSASWPSGGGGGASSPNISTSSSSFTNIPLSLMRKKISLSYSPDPTVNEHTNTPFIKSSMTLACMYCAKDTFTSMEQLQLHVNATHETILNGKSPLTPPLDATDYTSKRSRKKRDELELRTKMKIKTEGDVNDDMLICKYCPMKFTKIISLRNHMTEVHQDDINTAPFLSCPLCDLPCTSTASYAEHYVLEHCENPKVPIEKHQRTDETSMAAATSYQETKKKESQCQSSANSHQTKDYAIENSRTNNIDNYSSNTLLCGQCGAALENFESFRTHLAMHLQANNQMKLNAIRCPKCDLIFQTYDDMINHLTKHYHGQPTKQYLCDSCDKFYHNSDSLKKHLFESHAHHLYRCTLCHDTFDSSIAIQVHFTVKHMHECNVYKCSGCSINSRDKEESHESTLGMSGSVFKSAAEMMKHVTNVHLPKNSHMNELSSPGNAVSTPAGVIGELHRCCFCGIYCTSDVDLQLHLASHSTCLYRCPICREGFAVGFLLDKHIAHCHSVIKHDTVESKNLYCPLEQDEKVRNKRRRSPNINNNFNQSENVKRQIRSGIMNYNRCEYCERTDFSSDAELRAHKKLVHKIAATTTAAAAAATTTTTTPLNTKLQTKLQLSQHICSYCGESLRSRLELEAHTRLHHAPNESGKRYKCNICDEVFGSSGTLAEHKLQKHCRIKLSDVCIVCRGELKNETDFFHHVQKHSLEEFDPQNQRGDNNAMSHITAHCVVCRQTLISELECQLHAKYHLQNNIINNGTDKIQCCCICLREFGDEGNAINILSKCITMSEQQLKVCKRCYIRHSQGLPILGSLADDFDNNWSAIGLNVDGNKINDVSNENEINNIMDNNEINNVNNNECKIDLIKYEGYDDNNDGSCDEGENNMLDFDKDTVNVNNSGVRPYSCNHCTIKFTFRTELERHVTIHHDNNNGPVASSSSSISSSTLPFSIQQETLAGHSQTLEDNKSLDNVIVKEEILVNPDGDDEAIDDEAGEEEEENDDDDDDDDEEGEEVEDDVENNDDDNGDDKNNDEHSVIANEINN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00996603; iTF_00997282;
- 90% Identity
- -
- 80% Identity
- -