Basic Information

Insect: Meteorus colon
Gene Symbol: L
Assembly: GCA_030523125.1
Location: JAPYZG010001457.1:55065-61219[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1e-05 0.00094 19.5 1.3 1 23 99 121 99 121 0.98

2 18 0.38 35 5.1 3.9 1 23 127 149 127 149 0.97

3 18 6.1e-07 5.7e-05 23.3 2.3 1 23 155 177 155 177 0.99

4 18 0.00014 0.013 15.8 0.5 1 23 183 205 183 205 0.97

5 18 0.76 70 4.1 0.2 3 23 283 305 281 305 0.85

6 18 0.0069 0.64 10.6 0.1 2 23 357 379 356 379 0.92

7 18 0.14 13 6.5 0.1 2 23 387 409 386 409 0.88

8 18 0.34 31 5.3 0.0 3 23 475 495 473 495 0.97

9 18 0.003 0.28 11.7 0.3 2 23 508 529 507 529 0.97

10 18 0.0096 0.9 10.1 2.0 1 23 538 561 538 561 0.89

11 18 0.51 47 4.7 1.2 1 23 566 589 566 589 0.92

12 18 6.6 6.1e+02 1.2 0.4 1 13 596 608 596 610 0.85

13 18 0.05 4.7 7.9 2.0 1 23 665 687 665 687 0.98

14 18 0.067 6.2 7.5 1.2 1 23 692 715 692 715 0.94

15 18 4.4 4.1e+02 1.7 0.7 1 23 770 794 770 794 0.72

16 18 0.00054 0.05 14.0 1.8 1 23 823 845 823 846 0.94

17 18 0.0022 0.2 12.1 0.1 1 23 855 878 855 878 0.93

18 18 7.2e-05 0.0067 16.8 3.4 1 23 1086 1108 1086 1109 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1e-05	0.00094	19.5	1.3	1	23	99	121	99	121	0.98
2	18	0.38	35	5.1	3.9	1	23	127	149	127	149	0.97
3	18	6.1e-07	5.7e-05	23.3	2.3	1	23	155	177	155	177	0.99
4	18	0.00014	0.013	15.8	0.5	1	23	183	205	183	205	0.97
5	18	0.76	70	4.1	0.2	3	23	283	305	281	305	0.85
6	18	0.0069	0.64	10.6	0.1	2	23	357	379	356	379	0.92
7	18	0.14	13	6.5	0.1	2	23	387	409	386	409	0.88
8	18	0.34	31	5.3	0.0	3	23	475	495	473	495	0.97
9	18	0.003	0.28	11.7	0.3	2	23	508	529	507	529	0.97
10	18	0.0096	0.9	10.1	2.0	1	23	538	561	538	561	0.89
11	18	0.51	47	4.7	1.2	1	23	566	589	566	589	0.92
12	18	6.6	6.1e+02	1.2	0.4	1	13	596	608	596	610	0.85
13	18	0.05	4.7	7.9	2.0	1	23	665	687	665	687	0.98
14	18	0.067	6.2	7.5	1.2	1	23	692	715	692	715	0.94
15	18	4.4	4.1e+02	1.7	0.7	1	23	770	794	770	794	0.72
16	18	0.00054	0.05	14.0	1.8	1	23	823	845	823	846	0.94
17	18	0.0022	0.2	12.1	0.1	1	23	855	878	855	878	0.93
18	18	7.2e-05	0.0067	16.8	3.4	1	23	1086	1108	1086	1109	0.95

Sequence Information

Coding Sequence: atgttGTTTAAGGGGAATAGTTCACGTTTGGAATTTCTTATTGAACGTATTCAGGCACACAAAGAATCACCATCACCACttcttgatgaaaaatgtaattcacGATCAAAAGAAGGGACTTTGGCTCATGGGAGTTTTTCATGGCGTTGCGAGGAAGACAGTCTTACGTGCCAAAGAGGTGGTGGTACACCATCGTCATGCACAACATCGACCTCCATGAGTTTTGCATCAGAACCAGATGTTGATATTGATACTCCACGAATGGGAATTGATGCGAGCACCACATCGGGTCCTTATCCATGtcaattttgtgaaaaatcatttccCACATTGAGTTACCTGAAAAAACACGAGCAGAGTCATAGTGATCAAATGCCATATCGGTGTAGTTGGTGTGCAAGATTATTTAAACACAAACGTAGCAGAGATCGTCATGTAAAATTGCACACTGGTGACAGGAGATATCGCTGTACTCAATGTGAAGCAGCATTTTCACGCAGTGATCACTTGAAAATCCATATGAAAACTCATGACAATCAGAAGCCTTATCATTGCAGTGAGTGTTCTCGTGGGTACAATACAGCAGCTGCATTGACATCACATATGCAAGCACATAAACGTCCACAATCATCgaataatcaatattcaagAACGATAAATGATGATTTACGAAGTGCATCGTGGCCAAGTGGTGGTACATCATCACCAATCATAAgcacttcatcatcattcacaaatattccattggcattgatgcaaaaaaaaacgtcattAAGTTATTCACCGGAACCAACAGTCAATGAACATACAAATACTCcatttataaaatcatcaatgaCTCTGGCTTGTATGTATTGCGGTAAAGATACTTTTACTAGTATGGAACAGCTTCAACTTCATGTGAATGCAACAcatgaaacaattttgaatgGTAAAAGTCCATTGACATCACCACTTGATGCTACTGATTACACAATAAAACGTCCTCGAAAAAAGTGTGAAGAGTTGGAGGAGTTAAAAATGACAacgaaagtaaaaaatgaatcatttgtcAATGATGATACGTTAATATGTAACTATTGTCCAATGAAGTttacagaaattatttcacttcgTAATCATATCACAGAAGTACATCAAAGTACTGCTGCATTTTTATCTTGTCCTTTGTGCGGCATTCCATGTACCTCAACTGCTTCCTATGCAGAGCACTATGTCCTTGAACATTGTGATAATCCAAAAGTTCCAATAGAAAAATGTCAACGAACTGATAATGCAACAGTTGCTGCAGCTGCAACGTCATATCAAGTAAACGAAGTACAAGAAACCCAACGTCGAAGTCCTAATCGTCAAATGAAAGATTATAAAGTACAAAATTCAAGAACAAATAATATCGATAGTTTTTCATCAAGTACATTGCTTTGTGGACAATGTGGCGCTGCATTGGAAGATTTTGAATCATTCCGAACACACCTGGCAATGCATCTCCAggcaaataaacaaatgaaattaaatccAGTACGATGTCCAAAAtgtgatttgaattttcaaacttATGAtgatatgattattcatttgactAAACATTTTCATGGACAGCCAACGAAACAATATTTATGCGATGcttgtgataaattttatcatgactCTGATTCATTGAAGAAACATCTCTTTGAGTCACATGCTCATCGTTTATATAGATGTACACTCTGCCACGATACATTTGACTCGAGCATTGCTATTCAAGTGCATTTCAGCGTGAAGCATATGCATGAGTGCAATATATATAGGTGCAGTGGGTGCAGTACAAATTCAAGAGATAAAGAAGAGTCTCATGAGAGTACATTAGAGATGAGTGGTAGTATCTTTAAAAGTGCTGCAGAAATGATGAAGCATGTGACAAATGTTCATGTACCAAAGAATTCATACGTGACTGAACTTTCATCACCAGGAAACGCTGTCTCGACACCAGCAGGTGTCATTGGTGAATTGTATCGTTGTTGTTTATGTGGTATTTACTGTACCTCAGATGTTGATTTACAATTGCATCTGGCAAGTCATTCAACTTGTCTTTATCGATGTCCAAATTGTCGTGAAGGTTTTGCTGTTGAATTTTTACTCGACCAACACATTGCTCATTGTCACAGTGCCATTACTGATAACACTGgggaaaataagaaattgtaTTGTTCATCAGAGCAAGATGAAAAGGTGAGAAACAAACGGAGACGTTCACCAAACATCAATAatgatttcaatcaattggaaaatgtgAAACGTCAATTACGAACTGCTCTTATGAATTGTCATCGCTGTGAATATTGTGAGAGAACAGATTTTGCTAGTGATGTTGAACTACGTGGGCATAAGAAACTTGTCCACAAAATAACAGGAACAGCGCCAGCAGCATCAACCACCACAGCAcctttgaattcaaaattgcaAACAAAATTGCAACTGTCACAGCATATCTGCAGTTATTGCGGTGAAAGTTTGCGTTCACGATTGGAACTTGAGGCGCACACTCGACTTCACCATGCGCCAAATGAAGCGGGAAAACGTTACAAGTGCAATATATGTGATGAAGTATTTGGCAGTGGTGGTACATTAGCTGAGCACAAATTGCAAaaacattgtaaaataaaattgagcgATGTATGCATTGTTTGTCGTGGTGAATTAAGAAATGaaacagatttttttcatcatgtacAAAAACACAGTTTGGAAGAGTTCGAACCGCAAAATCAGCGAGGTGACACCAATGCAATGTCTCATATAACAGCACATTGTGTTGTATGTAGACAAACATTGATTAGTGAATTGGATTGTCAACTTCATGCCAAATAtcatttacaaaataatatgataaataatgacaatgataaaattcaatgttgttGTATTTGTCTTCGTGAATTTGGCGATGATGgaaatgcaataaatatattgtcaaAATGTATGACAATGAGTGAACAGCAATTGAAAGTTTGTAAACGTTGTTATATAAGACATTCACAAGGATTACCAATACTTGGTTCATTTGCTgataattcagaaaaaaaattagatgaaattGGATTAAATGTTGATGgtgataaaatcaataacgtcaataataatgagtgtaaaatgaatataatgaaatatgaaggTTGCGATGATAATAACGATGGTAGTTGtgacgatgaagaaaatgatatgtTAAACTCTGATAATGATACAGTGAATGTAAATGTTTCTGGCGTCCGTCCATATAGCTGCAATCATTGCACCATTAAATTCACCTCTAGAACTGAATTGGAGCGTCATGTTGCCAttcatcatgatgataataatggcCCGGTGGCTTCTTCCTCTTCTATCAATTCCTCACAGTTACCATTCAACATTCAACAAGAGACATTGGCAGGCCATTCACAAACTCGTGAAGACAATAAGTCGTTAGACAATGTTATTGTTAAGGAAGAGATTTTAGTTAATCCAGATGGTGtagaagaaaaggaagaggaagaggaagaggaagaggaagaagaagaagaagaagaaggtgaagtagatgatgatgaggagGATGATGAAGAGGATGAGGTGGAAAATGATTTGGTGCAGAATAATAATGACagttgtaaagaaaaaaataacgatgCACCCTCAATGATAGCaagtgaaattaatgattga
Protein Sequence: MLFKGNSSRLEFLIERIQAHKESPSPLLDEKCNSRSKEGTLAHGSFSWRCEEDSLTCQRGGGTPSSCTTSTSMSFASEPDVDIDTPRMGIDASTTSGPYPCQFCEKSFPTLSYLKKHEQSHSDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCSECSRGYNTAAALTSHMQAHKRPQSSNNQYSRTINDDLRSASWPSGGTSSPIISTSSSFTNIPLALMQKKTSLSYSPEPTVNEHTNTPFIKSSMTLACMYCGKDTFTSMEQLQLHVNATHETILNGKSPLTSPLDATDYTIKRPRKKCEELEELKMTTKVKNESFVNDDTLICNYCPMKFTEIISLRNHITEVHQSTAAFLSCPLCGIPCTSTASYAEHYVLEHCDNPKVPIEKCQRTDNATVAAAATSYQVNEVQETQRRSPNRQMKDYKVQNSRTNNIDSFSSSTLLCGQCGAALEDFESFRTHLAMHLQANKQMKLNPVRCPKCDLNFQTYDDMIIHLTKHFHGQPTKQYLCDACDKFYHDSDSLKKHLFESHAHRLYRCTLCHDTFDSSIAIQVHFSVKHMHECNIYRCSGCSTNSRDKEESHESTLEMSGSIFKSAAEMMKHVTNVHVPKNSYVTELSSPGNAVSTPAGVIGELYRCCLCGIYCTSDVDLQLHLASHSTCLYRCPNCREGFAVEFLLDQHIAHCHSAITDNTGENKKLYCSSEQDEKVRNKRRRSPNINNDFNQLENVKRQLRTALMNCHRCEYCERTDFASDVELRGHKKLVHKITGTAPAASTTTAPLNSKLQTKLQLSQHICSYCGESLRSRLELEAHTRLHHAPNEAGKRYKCNICDEVFGSGGTLAEHKLQKHCKIKLSDVCIVCRGELRNETDFFHHVQKHSLEEFEPQNQRGDTNAMSHITAHCVVCRQTLISELDCQLHAKYHLQNNMINNDNDKIQCCCICLREFGDDGNAINILSKCMTMSEQQLKVCKRCYIRHSQGLPILGSFADNSEKKLDEIGLNVDGDKINNVNNNECKMNIMKYEGCDDNNDGSCDDEENDMLNSDNDTVNVNVSGVRPYSCNHCTIKFTSRTELERHVAIHHDDNNGPVASSSSINSSQLPFNIQQETLAGHSQTREDNKSLDNVIVKEEILVNPDGVEEKEEEEEEEEEEEEEEEGEVDDDEEDDEEDEVENDLVQNNNDSCKEKNNDAPSMIASEIND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01560691;
90% Identity: iTF_00996603;
80% Identity: -