Zalb006704.1
Basic Information
- Insect
- Zele albiditarsus
- Gene Symbol
- -
- Assembly
- GCA_958496275.1
- Location
- OY292411.1:6506338-6507075[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-14 5.6e-11 41.9 0.0 4 38 18 52 15 54 0.94
Sequence Information
- Coding Sequence
- atggtaCGGAATTATATAAGAAAAACGCAACGTCAATCGTGGGATAAACAAGATATGGCAAATGCAATTCAAGCTGTAGCAGATGGACGAATGGGTTACAGAAAAGCTTCTAAAGCATATTCAGTTCCTCGGACGACTCTGGAACGTCGTGTGAAAATGTTTAAAGCTATTCCAGACACTGAATCAGCCACCAAGAAAGGTTTAGGAAAATTTACGCCAGTGTTCAATCAAGAGCAAGAAGAGGAACTAGTATCATACTTAATTACTATGGAGAATCGACTTGATGGTTTAACCACAAAAGAATTGCGGGTATTGGTTTATCAGTTTGCCGAAAAGCACAAAATCTCACACTCATTCACAAATGGAATGGCAGGAGTGGATTGGGTTGAACGTTTTCGAAATAGAAATCCCAATCTTTCAATACGCAAGCCTGAACCAACATCTATTGCTCGTGTAATGGGTTTTAATCGTGTTACGGATAATAGTTTCTATGAGTTACTCGAACAAACACTCGAGTCTTACGATTTAACGTCTgatcacatatataatatggatgAAACAAGCTCTGTTATATCATGTAACGAACATGATCAATAA
- Protein Sequence
- MVRNYIRKTQRQSWDKQDMANAIQAVADGRMGYRKASKAYSVPRTTLERRVKMFKAIPDTESATKKGLGKFTPVFNQEQEEELVSYLITMENRLDGLTTKELRVLVYQFAEKHKISHSFTNGMAGVDWVERFRNRNPNLSIRKPEPTSIARVMGFNRVTDNSFYELLEQTLESYDLTSDHIYNMDETSSVISCNEHDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00451852; iTF_01001999; iTF_01000464; iTF_00996953; iTF_01001177; iTF_00996256;
- 90% Identity
- -
- 80% Identity
- -