Basic Information

Insect: Zaprionus tsacasi
Gene Symbol: -
Assembly: GCA_018904105.1
Location: JAEIFR010000030.1:758092-761294[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.8e-07 4.7e-05 23.5 2.3 1 23 221 243 221 243 0.98

2 16 0.00066 0.045 14.1 2.8 1 23 250 272 250 272 0.98

3 16 0.33 23 5.6 3.7 1 23 413 436 413 436 0.96

4 16 0.02 1.4 9.4 0.6 1 19 443 461 443 463 0.94

5 16 0.0083 0.58 10.6 4.7 1 23 473 495 473 495 0.95

6 16 3.5e-05 0.0024 18.1 0.4 1 23 502 525 502 525 0.97

7 16 8.1e-05 0.0056 16.9 1.1 2 23 533 554 532 554 0.96

8 16 0.0051 0.35 11.3 0.0 2 21 581 600 580 601 0.94

9 16 0.008 0.55 10.6 1.9 1 23 657 680 657 680 0.96

10 16 0.81 56 4.3 0.4 1 23 717 740 717 740 0.91

11 16 0.00033 0.023 15.0 1.0 2 23 781 803 780 803 0.95

12 16 0.0034 0.23 11.8 0.2 1 23 817 839 817 839 0.95

13 16 0.0001 0.0069 16.6 1.2 1 23 845 867 845 867 0.99

14 16 3.2e-07 2.2e-05 24.5 2.6 1 23 873 895 873 895 0.98

15 16 1e-05 0.00072 19.7 3.8 1 23 901 923 901 923 0.97

16 16 0.0016 0.11 12.8 0.3 1 23 929 953 929 953 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.8e-07	4.7e-05	23.5	2.3	1	23	221	243	221	243	0.98
2	16	0.00066	0.045	14.1	2.8	1	23	250	272	250	272	0.98
3	16	0.33	23	5.6	3.7	1	23	413	436	413	436	0.96
4	16	0.02	1.4	9.4	0.6	1	19	443	461	443	463	0.94
5	16	0.0083	0.58	10.6	4.7	1	23	473	495	473	495	0.95
6	16	3.5e-05	0.0024	18.1	0.4	1	23	502	525	502	525	0.97
7	16	8.1e-05	0.0056	16.9	1.1	2	23	533	554	532	554	0.96
8	16	0.0051	0.35	11.3	0.0	2	21	581	600	580	601	0.94
9	16	0.008	0.55	10.6	1.9	1	23	657	680	657	680	0.96
10	16	0.81	56	4.3	0.4	1	23	717	740	717	740	0.91
11	16	0.00033	0.023	15.0	1.0	2	23	781	803	780	803	0.95
12	16	0.0034	0.23	11.8	0.2	1	23	817	839	817	839	0.95
13	16	0.0001	0.0069	16.6	1.2	1	23	845	867	845	867	0.99
14	16	3.2e-07	2.2e-05	24.5	2.6	1	23	873	895	873	895	0.98
15	16	1e-05	0.00072	19.7	3.8	1	23	901	923	901	923	0.97
16	16	0.0016	0.11	12.8	0.3	1	23	929	953	929	953	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCAATCATTTGCCGCACTTGTGATGCAAAGGACACGGATAAATTGTATAAGCTGGCAACAGCCACCAAAAGGTTTCCAGATAAACTGCTTTCTGAGATTTTGACGGAATTGACGCACATCGAGGTGGACGAAACATTGGGACGGCAGTTACCACAATGCCTGTGCGGCACCTGTGCAAGAAAACTAATTGGCGCCTATTACTTCGTAAAACAAGCGCTGGCTGCCAACGAGCTGCTAATGAATCATGTCCAGGACAACGGCAAAGCAGCGGTTAACGATTGCCTGCAGGAAGTCCCTATGGAGATGTGTGCGGAGCAGCATGTGGAGGTTAAACTGGAAACAGAAGAAGAGGACTTGGAAAACGACATAACCTGCACAGACTTGCCTGAGTTCACGACCGTACAAAACACCAACGATGTTGATACTGCAGTGCAATTTAGCTTTGTTAATAAAAAGTCCACCGACCCGTTGACAATGCTTGAATCTGTCAAGCGAGAATTGGATGCGGATGGAACAAGAGTGATTTGCGCTGAAGAGCAAGAGTATAAGGCTGATTTTGATGAGGACGATTCCCTGGATGATTTACCTCTACAGCTGCGGGTCACCAAATGGAAACAGTCGGATAAGATGCGCTCGATAAGAAGACAGATTTTTAAGTGCCAGGAATGTCCTAAAAGTTTTAAACGTCCTCGTTATCTGAAACAGCATTCGCGAGTCCACAAACCGAAAGCCGACTGGTTCTCCTGCTCGTTCTGCATACGAAAGTTCAGTCACAGCGATGCACTACAGACGCATCTCAGGATCCACGGCGATTCGAAGCGCTCGGCAAACCTTAGTGATAGCAAGAAAGCCAAGGAAGTTGATCTTAATGTGTGCAAACCTCATGGTTACAAGCTAATCGAATGCATGATCTGTCAGAACCAATACGATAAGATTTCACACTTGCGTTGCCATTTGGAACATCATCCGGAAATAAATTTCGGCACACGCTCAAGTATGCCGATAAGTGAGTTGGCTGAGCTCTTCTATCCCGATGCCAAGGACGTTAGCGAGGAGCAGTTAAAGATACTAATACGCAAAGATTTGGCAGCAGGCATCTATCAGCGATTCTACTCTATTACCGATCAGTCAGGCTACGAAATGGATCTGGACAGCTCGGAGACGGAAAGCGAAGTCGAATTTGAAAACGATGAGGCGAGGCAACATCGGCGCATACCCAAAGCGAAGTACAGCTGTGAATTGTGCCAGGTGCGCTGCCTACGCAAATATCAGCTATACGATCATCAACGTCAATCGCATGCCTGGTTGGATGCACCCCATGTGTGTGGTCGCTGTGATGCACGGTTTGTTAGCCAACAGCTGCTGCGGCATCACAACGAGCTGCAATGCAAAAATGCACAAAAGCGTTTTCTGTGCCACAAATGTCCGCTACGTTTCCGCTGGCGGCATAACCTAAAGCTGCACATACGGGAGCACAGGATAACAAACCAAACATTCGAGTGTGCCGACTGCAAGCGTGTCTTCGATAAGAAGAAATCGCTGACGGTGCATCTGCTTAGTGTGCATGCTGAGGAGTCCAAACTGATACCATGTCAATGGTGCAGTCGCAAGTTCTATCGCCGGGACTATCTAGTGAAACATTTAAAGCGACACGGTATTAGGGAACTAGATATACCGCTTGCCGAGACACTTATTGCTGCTACCTCTAGGGCGAATGGGACCAAACGGATTACTTGTAAAATATGCAACATGCAATTCGACCGCATCATTGATCTGCGTGCTCACATTCAGCTGGAACTGAAGCTATCGTTGTCGCTGCATCAGAACTACGATTCACCACATAATTATTCCATAACGAATGAATCTGGTTACGAGCTGCAGCTTAACGATTCCGAGACGGAGGACGAGATGCAGTTGCAAATGCATCCGACGACTGGCTCAACAAGCGCACGATTTATCTACGTTTGTGAGTTGTGTCGGGTGCAGTGTAAGCGCAAATACGAGATGATACAACATCAGCGGGCCATGCATCAGTTCGACAAAATGCCGTACGAATGCGAGATGTGCATCTTCAAATGCGTCTGCAAGAGTATTATGGATCAACACAGGCAATCTCAGTGTCACAGTGTTGAAAAGAAATACACGTGCATCCGCTGCAGCTATAAGTTCATGTGGCCTGAGAATTTGGAACAACATATTAAACTGCAACATGCCGGGAATTCGGGTACAATTGCCGCGTCAAGTGAAGCGACGGTCAGCACTAATCGTATACATGCCGATCCCGCCGATGCAACAGTTGCAGTGGCGGCGGCAGAGGATGTGCAGCTGTTGCAGTGTCCGCACTGTGATCGCACCTATCAGATGAAAGCACGTCTCAATAATCACATACGAGACGTGCACATCAACGGGGATCGGAAGCGCAAGGAAGCGATGAAAAAGTTCCTATGCTCATTGTGTGGCCTGGAAACCCAATCGGCGGCAACCCTTGTCACTCATATGCGTCGCCACACGGGTGAAAAGCCCTTCAAATGCGATCTCTGCGAAATGGCGTTCCCTCGGCATTCAGAAATGATTTCACACCGGCGGATGCATACGGGCGAGAAGCCATTCCATTGTACAGTATGCGGCAAGGATTTCGCCCGATCCGATAAGTTGAAGCGGCACATGCTGACGCACAGTGGACTTAAGCCGCACAAGTGCACGTATTGTGACAAGAGCTACCGCCAGGCAAAGGACTTAAAACTGCATTTACAGCAGCACACTGGCGAGTGTCCGTTTATATGCGGCACTTGCGGGGAACGCTTCATTCAGGGCAAGGCACTGGAGAAGCATCGCATGATGCGACGTCACTTCGACGAAGTGGAGGAACGCACCACGACCACGTTGACCGCATGA
Protein Sequence: MKLPIICRTCDAKDTDKLYKLATATKRFPDKLLSEILTELTHIEVDETLGRQLPQCLCGTCARKLIGAYYFVKQALAANELLMNHVQDNGKAAVNDCLQEVPMEMCAEQHVEVKLETEEEDLENDITCTDLPEFTTVQNTNDVDTAVQFSFVNKKSTDPLTMLESVKRELDADGTRVICAEEQEYKADFDEDDSLDDLPLQLRVTKWKQSDKMRSIRRQIFKCQECPKSFKRPRYLKQHSRVHKPKADWFSCSFCIRKFSHSDALQTHLRIHGDSKRSANLSDSKKAKEVDLNVCKPHGYKLIECMICQNQYDKISHLRCHLEHHPEINFGTRSSMPISELAELFYPDAKDVSEEQLKILIRKDLAAGIYQRFYSITDQSGYEMDLDSSETESEVEFENDEARQHRRIPKAKYSCELCQVRCLRKYQLYDHQRQSHAWLDAPHVCGRCDARFVSQQLLRHHNELQCKNAQKRFLCHKCPLRFRWRHNLKLHIREHRITNQTFECADCKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRRDYLVKHLKRHGIRELDIPLAETLIAATSRANGTKRITCKICNMQFDRIIDLRAHIQLELKLSLSLHQNYDSPHNYSITNESGYELQLNDSETEDEMQLQMHPTTGSTSARFIYVCELCRVQCKRKYEMIQHQRAMHQFDKMPYECEMCIFKCVCKSIMDQHRQSQCHSVEKKYTCIRCSYKFMWPENLEQHIKLQHAGNSGTIAASSEATVSTNRIHADPADATVAVAAAEDVQLLQCPHCDRTYQMKARLNNHIRDVHINGDRKRKEAMKKFLCSLCGLETQSAATLVTHMRRHTGEKPFKCDLCEMAFPRHSEMISHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCDKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGKALEKHRMMRRHFDEVEERTTTTLTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: iTF_01553381;
80% Identity: -