Ztsa005086.1
Basic Information
- Insect
- Zaprionus tsacasi
- Gene Symbol
- -
- Assembly
- GCA_018904105.1
- Location
- JAEIFR010000598.1:5763758-5772003[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.3e-12 1.2e-08 34.4 0.0 1 40 448 488 448 491 0.90 2 4 3.8e-14 8.7e-11 41.2 0.1 2 39 503 540 502 543 0.94 3 4 6.7e-18 1.5e-14 53.2 0.0 1 45 557 602 557 602 0.98 4 4 4.3e-20 9.8e-17 60.2 0.0 1 43 609 652 609 654 0.96
Sequence Information
- Coding Sequence
- ATGGAAGGAAAGGGTCTGCTACGCACTGCGGAACAATTGAAAATCAAAGGACTCTGCGAACCTGCTGAGAATGCTGATGATCTGAATGACGCTGCATCGGCGACGATAACCGTATCGGAGAATATACAACAGGCTGTGGTTGGCAATATTGGACAAAATCAAACATCTATCGTGAGTCTACAGCAAACAGCCGACGGCAATTATATACCCGTTGCTGCATCGCCCGGTGACGATTCCGATAGCGATAATAAACCGCAAAAGATCTGCAAAACAGAACAATCGGTGGCCTCGCCGGCATCCACATCGTCTACATCGAATAATGCCGGTGCTGCTGGCGTGAGCGGTCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCACACGACCGGAGACGAGAGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGCACATGCCACGCATGCGGAAATTAGCGGCGCCACTGTCATGGAGATTGATCCAAGCCAAATCAAACACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGACATGTACAATTCGGATACGAGCGAGGATTCGATGATGATCGCCAATGGTTCGCCGCACGATCAAAATGAACCACACTATACGAATTTGGATCAGCAACACGGCGGCCTTGGTGGCAGTGTTTGTGGCCCCGGCGCCGGTGGTGTTGGTGGTGGTGGCGGCATTGGTAGTGGTGGTGGTGGTAATGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATATATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCATGGAATGAGGATGCCCTACAGAGTGCACTGGAGGCATTACGTTCGGGTCAGATATCGGCAAATAAAGCATCGAAAGCTTTTGGTATACCCTCATCGACGCTCTATAAGATAGCGCGTCGTGAGGGTATACGATTGGCGGCGCCATTCAATGCCGCACCAACCACATGGACACCAGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCGGTGCAAAAAGCTAGCGCTGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGTGAGGGCATTGAACTATCGCGATCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATAAATCAGGCGGCCATACACTATAACCTGCCCTACAGCTCGCTTTATGGGCGCTTCAAGCGCGGCAAATATGATGTGGCCAACACCAGCGGAGTCTCGTTGCTTAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTATAGTCCTTTTGCTCCTCAATTAACATTGCTGCTCAAACTTAACGCCACATGA
- Protein Sequence
- MEGKGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIGQNQTSIVSLQQTADGNYIPVAASPGDDSDSDNKPQKICKTEQSVASPASTSSTSNNAGAAGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGIGSGGGGNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGVSLLNASGNTTGSIEIIEHSQENSLHMLQQQFPYSPFAPQLTLLLKLNAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00560957;
- 90% Identity
- -
- 80% Identity
- -