Basic Information

Gene Symbol
pnr
Assembly
GCA_018901805.1
Location
JAEIFH010000789.1:13107999-13112257[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.7e-17 1.9e-13 49.7 2.5 1 35 502 535 502 536 0.98

Sequence Information

Coding Sequence
ATGTATAATGTACCACATAAGTATCGCCAAATATTCAACTGTCTCTCTATTAAGCCGTTGGAGAATGATGGATACCCTTCTGTTATCTGCCGTGAGTGCCGAAGCAAACTGGAATCGTTTTGGAAGTTTCGCAATATGGCACATAACTCCCATTACGTTTTAAAGGAGTTTTTAACAATATCACAATCTTCGAAATTGAGTTCAAAAGATGTGGAAGATGAACTTGATGCAATTATAAAATCAACATCTGAAGCAATAGCTGCGAAAGCACTGACTGAATTGAGCAAATCTTCAAAAACAAGATATAGCCAACGGCATCCAACAGTTGGTGGCTCCATTTATTCGCGAAAGGATGAGGAGCGCCAAATTGAAACTAACTTAAGAGATATAAAACCTCCTCTATTATATTCTAATTTATTTGATAAAGTCTTATCACAACAACAAACATTAAAAGCTTCTAATGATGGGGAAGCTATTATAAACCAGGAGAATATTATGACACCGCCAACAGTTGCTAAGAAAACAGAAAAGATTATTGAATTAGATAACGGAATGGCGATAAAATCAAAAGATTCAGATGTTGAGCAATACAAGAACTTGCAACAACAACTAGAGACTGCTGCAGTACTTATGGACATAAGTAAAAAAATTGTCATTTCACCACCATGCTCGAATCCCCAATCTCCTTGTCTTTCTGCTAATGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATTGATTCTGATGTGCAAGATGGTGTTGAAATTGACTTATCCGTGAAGAAAATTAAAAGTGAATATGGCAGTGAACCGAATGTTGCCCCAGCTCGAAGCTCGTATTGTCCACAGCCAATACCTGATATCCATGCGAGTCCCACAAGAATTGAGGGAAACGCAAAAAACTATATTATAACTACTCCGAAAATTGTGTCGTCTTGTCAATGGACGGCGACAAAGAAACGGAATGCCGAAAGTATTACTCCTTGTCTATCGGACTCTGAGGATAGCTCTGACTCGAATAAACTTGAAATGGATATTGCATCTGCCATGAACGATAGAAAGACTCCAGAGAGTGTTAACTCTGATCACACCACAGATGCTGCTACTACTCAACTGTGGCAAGCCTTGGCACGATCGGCTGCCAAGAGTAATGAGAATAGTCAAACATCACAAATCTTTAGAAATATGATGAGTCAAACTTTTGTATTTCCTGTGCCGTCAAACATTGCAATGGCAAAAGTACCTGAAGAACCATTACCACTTTTAAAGGATATGTCAGAAGCGCAATCAAGTGCTATCAAGATATGCAGAAGAAAGCAAAGTTTCCCTACCAAAACAGATTGTATCGAGTCTCCAGAGATAAAGGTAACTGACACTTGTGTTCGCTCAGAAGGCGGGACAAGTGCATTGACTGAGGGAATCAAAGATAAAAAGGGATTGAAATCTAATAGCAATACTGTTCTATCTACTTCACAAAAGGATATGTCATGTTCAAATTGTGGTACACTGACTACAACAATTTGGAGACGTAGCGTCAGAGGCGAAATGGTTTGTAACGCTTGTGGGCTCTACTTTAAGCTTCATGGCGTGAATAGACCCCATTCTATGCGACGCGATACTATTCATACCCGACGCAGGCGTCCAAAAGAATGCGAAAAATCCAAAAAGAGAAACAGGCAATTACCCTGCAACTCGACAGTGGAATTCGAAACACATAATATTCATAGCCCTATAGAATGCAAGAAGCTGGATTTGGCGGCAAATCAGGAATCAGCGCTTAGTATTTCAGATATTGTATTTAACAAATACAAAACTGATATATCTGACACAGGAGTTGCGGGTACATCACTGAAAGATGTTATTTTAAAACGAAAAAAATCTCAATCTTTGCCTGAGTTCAATGATGTCCGCGAAGGCGAGGAACTATCCGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAACGCCAAATAA
Protein Sequence
MYNVPHKYRQIFNCLSIKPLENDGYPSVICRECRSKLESFWKFRNMAHNSHYVLKEFLTISQSSKLSSKDVEDELDAIIKSTSEAIAAKALTELSKSSKTRYSQRHPTVGGSIYSRKDEERQIETNLRDIKPPLLYSNLFDKVLSQQQTLKASNDGEAIINQENIMTPPTVAKKTEKIIELDNGMAIKSKDSDVEQYKNLQQQLETAAVLMDISKKIVISPPCSNPQSPCLSANVDTSIKSSVIKSKRPSIDSDVQDGVEIDLSVKKIKSEYGSEPNVAPARSSYCPQPIPDIHASPTRIEGNAKNYIITTPKIVSSCQWTATKKRNAESITPCLSDSEDSSDSNKLEMDIASAMNDRKTPESVNSDHTTDAATTQLWQALARSAAKSNENSQTSQIFRNMMSQTFVFPVPSNIAMAKVPEEPLPLLKDMSEAQSSAIKICRRKQSFPTKTDCIESPEIKVTDTCVRSEGGTSALTEGIKDKKGLKSNSNTVLSTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLPCNSTVEFETHNIHSPIECKKLDLAANQESALSISDIVFNKYKTDISDTGVAGTSLKDVILKRKKSQSLPEFNDVREGEELSVPLNLVSSENNAKLTYNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01552828;
90% Identity
iTF_01552828;
80% Identity
-