Basic Information

Gene Symbol
pnr
Assembly
GCA_018903695.1
Location
JAEIFO010001553.1:13127149-13131510[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.6e-17 1.8e-13 49.7 2.5 1 35 501 534 501 535 0.98

Sequence Information

Coding Sequence
ATGTATAATGTACCACATAAGTATCGCCAAATATTCAACTGTCTCTCTATTAAGCCTTTGGAGAATGATGGATACCCTTCTGTTATCTGCCGTGAGTGTCGAAGCAAACTGGAATCGTTTTGGAAGTTTCGCAATATGGCACATCACTCTCATTATGTTTTAAAGGAGTTTCTAACAATATCACAATCTTTGAAATTGAGTTCAAAAGATGTGGAAGATGAACTTGATGCAATTATAAAATCAACATCTGAAGCAATAGCTGCGAAAGCACTGACTGAATTGAGCAAATCTTCAAAAACAAGATATAGCCAACGGCATCCAACAGTTGGTGGCTCCATTTATTCTCGAAAGGATGAGGACCGCCAAATTGAAACTAACTTAAGAGATATAAAACCTCCTCTATTATATTCTAATTTATTTGATAAAGTCTTATCACAACCACAAACATCTAAAGCTTCTAGTGATGGGGAAGCTATGATAAACCAGGAGAATATTATGACACCGCCAACAGTTGCTAAGAAAACAGAAAAGATTATTGAATTAGATAACGGTACGGCGATGAAATCAAAAGATTCAGATGTTGAGCAGTACAAGAACTTGCAACAACAACTAGAGACTGCTGCAGTGCTTATGGACATAAGTAAAAAAATTGTCATTTCACCACCATGCTCGAATCCCCAATCTCCTTGTCTTTCTGCTAATGTAGATACAAGTATTAAAAGTTCTGTGATAAAATCAAAACGTCCATCAATTGATTCTGATGTGCAAGATGGTGTTGAAATTGACTTATCCGTAAAGAAAATTAAAAGTGAATATGGTGAACCGAATGTTGCCCCAGCTCGAAGCTCGTATTGTCAACCACCAATACCTGATATCCATACGAGTCCCACAAGAATTGAGGGAAACCCAAAAAACTATATTATAACTACTCCGAAAATTGTCTCGTCTTGTCAATGGACTGCGACAAAGAAACGGAATACCGAAAGTATTACTCCTTGTCTATCGGACTCTGAGGATAGCTCTGACTCGAATAAACTTGAAATGGATATTGCATCTGCCATGAATGATAGAAAGACTCCAGAGAGTGTTAACTCTGATCATACCACGGATGCTGCTACTACTCAACTGTGGCAAGCTTTGGCACGATCGGCTGCCAAGAGTAATGAGAATAGTCAAACATCACAAATTTTTAGAAATATGATGAGTCAAACTTTTGTATTTCCTGTGCCGTCAAACATTGCAATGGCAAAAGTACCTGAAGAACCATTACCACTTTTAAAGGATATGTCAGAAGCCCAATCAAGTGCTGTCAAGATATGTAGAAGAAAGCAAAGTTTCCCTACCAAAACAGATTGTATCGAGTCTCCAGAGATAAAGGTAACTGACGCTTGTGTTCGCTCAGAAAGCGGGTCAAGTGGATTGACTGAGGGAATCAAAGATAAAAAGGGATTGAAATCTAATAGCAATACTGTTTTATCTACTTCACAAAAGGATATGTCATGTTCAAATTGTGGTACACTGACTACAACAATTTGGAGACGTAGCGTCAGAGGCGAAATGGTTTGTAACGCTTGTGGGCTCTACTTTAAGCTGCATGGCGTGAATAGACCCCATTCTATGCGACGCGATACTATTCATACCCGACGCAGGCGTCCAAAAGAATGTGAAAAATCTAAAAAGAGAAACAGGCAATTACCCTGCAACTCGACGGTAGAATTCGAAACTCATAATATTCATAGCCCTATAGAATGCAAGAAACTGGATTTGGCGGCAAATCAGGAATCAGCGCTTAGTATTTCAGATATTGTATTTAATAAATACAAAACTGATATATCTGACACAGGAGTTGCGGGTACATCACTGAAAGATGTTATTTTAAAACGAAAAAAATCTCAATCTTTGCCTGAGTTTAATGATGCCCGCGAAGGCGAGGAACTGTCCGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAACGCCAAATAA
Protein Sequence
MYNVPHKYRQIFNCLSIKPLENDGYPSVICRECRSKLESFWKFRNMAHHSHYVLKEFLTISQSLKLSSKDVEDELDAIIKSTSEAIAAKALTELSKSSKTRYSQRHPTVGGSIYSRKDEDRQIETNLRDIKPPLLYSNLFDKVLSQPQTSKASSDGEAMINQENIMTPPTVAKKTEKIIELDNGTAMKSKDSDVEQYKNLQQQLETAAVLMDISKKIVISPPCSNPQSPCLSANVDTSIKSSVIKSKRPSIDSDVQDGVEIDLSVKKIKSEYGEPNVAPARSSYCQPPIPDIHTSPTRIEGNPKNYIITTPKIVSSCQWTATKKRNTESITPCLSDSEDSSDSNKLEMDIASAMNDRKTPESVNSDHTTDAATTQLWQALARSAAKSNENSQTSQIFRNMMSQTFVFPVPSNIAMAKVPEEPLPLLKDMSEAQSSAVKICRRKQSFPTKTDCIESPEIKVTDACVRSESGSSGLTEGIKDKKGLKSNSNTVLSTSQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLPCNSTVEFETHNIHSPIECKKLDLAANQESALSISDIVFNKYKTDISDTGVAGTSLKDVILKRKKSQSLPEFNDAREGEELSVPLNLVSSENNAKLTYNAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2