Basic Information

Transcription Factor Domain

TF Family: DM
Domain: DM domain
PFAM: PF00751
TF Group: Zinc-Coordinating Group
Description: The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.7e-25 7.4e-22 76.9 8.9 1 47 37 83 37 83 0.98

2 4 4 1.7e+04 -5.3 1.8 8 15 279 286 278 288 0.68

3 4 0.54 2.3e+03 -1.5 0.6 23 32 307 316 305 321 0.72

4 4 0.22 9.2e+02 -0.2 0.2 21 32 337 348 327 352 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.7e-25	7.4e-22	76.9	8.9	1	47	37	83	37	83	0.98
2	4	4	1.7e+04	-5.3	1.8	8	15	279	286	278	288	0.68
3	4	0.54	2.3e+03	-1.5	0.6	23	32	307	316	305	321	0.72
4	4	0.22	9.2e+02	-0.2	0.2	21	32	337	348	327	352	0.74

Coding Sequence: ATGGTCAATGAGACTGGTGTGGATGTACCGCCGGTTAGTGGCAAACGTGCCCGTCTAGCAGCTAGCAACAAGATCTCCAAATCCACGGAACATCCAAAGGTTTCAAATCGCGTACCCAAGTGCGCGCGCTGTCGCAATCATGGAATCATCTCGGAGCTGCGTGGCCACAAGAAACTCTGCACCTACAAGAGCTGCAAGTGCGCCAAGTGCGTCCTGATCTTCGAGAGACAGCGCATTATGGCAGCACAGGTCGCCCTGAAGCGTCAGCAGGCGGTGGAGGATGCGATTGCGCTGCGCCTGGTGGCAAACAAGACGGGACGCCAGATAGACGCACTGCCGCCGGGCAGTATATTCGGTCTGACCGTCACACAGCCGGCGATAGCAGCGACGCCAGCCACTCCATCAGTCTCAGCCAGCAGTCCAAAGGCAGAGCATGCAACGCACACAGAGCAGTCGCAATCGGAGCAGAGCGTTAGCCGTGCAGAGCCTGAGCCGTTGGCTGTGGCACAGGATCTGAGTGCACCACGGCGTGAGAATGTGTCCCAGACAGCCATCGATATGCTGGCACAGCTGTTTCCGCAACGCAAACGCTCCGTGCTGGAGCTGGTGCTGAAGCGCTGCGATCTGGATCTGATACGCGCCATTGAGAATGTATCGCCGCCCATGGAGCAGCCAAGCAAGGGAGCTGCTGCTGCCGCCAGCGCCTGCGCCTCCGCCCACATTGCAGTCGCAGCTGCAGCTGGCATTGCCCACACGCAGCAGCGCCTTCCGGCCCGTCATAGCCGAGCAGCAGCAGCAGCAGCAGGTGAGATGATTCCCCTGGCAAGTGACTGCTGCCGCCGCCATCTGTGCGTATCCCAAGTGGTTTGTTCCCCTCTCCTTTCCCGTCACCATGGGGCACCTGTCGAACCTGGCGCCCGCTGCACGCTGCCCAACTGCAACTGCCTGGAGAGCTACCGCCACCCCCGCAAAATCACACCAACCACAAAACACCCCCTGTCGAACCTGGCGCCGCGCTGCACGCTGCCCAACTGCAACTGCCTGGAGAGCTACCAGTTCCACTAG
Protein Sequence: MVNETGVDVPPVSGKRARLAASNKISKSTEHPKVSNRVPKCARCRNHGIISELRGHKKLCTYKSCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRQIDALPPGSIFGLTVTQPAIAATPATPSVSASSPKAEHATHTEQSQSEQSVSRAEPEPLAVAQDLSAPRRENVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSPPMEQPSKGAAAAASACASAHIAVAAAAGIAHTQQRLPARHSRAAAAAAGEMIPLASDCCRRHLCVSQVVCSPLLSRHHGAPVEPGARCTLPNCNCLESYRHPRKITPTTKHPLSNLAPRCTLPNCNCLESYQFH

Sequence clustering based on sequence similarity using MMseqs2