Basic Information

Insect: Zaprionus ornatus
Gene Symbol: RREB1
Assembly: GCA_018904035.1
Location: JAEIFZ010000001.1:6481394-6489314[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.015 1.2 9.7 0.8 1 21 97 117 97 119 0.93

2 12 0.0029 0.22 12.0 1.0 1 20 129 148 129 150 0.95

3 12 6.9 5.3e+02 1.4 0.0 2 23 179 205 178 205 0.82

4 12 0.19 14 6.3 2.0 2 20 211 229 211 234 0.91

5 12 0.0035 0.27 11.7 0.1 1 23 417 439 417 439 0.97

6 12 5.2e-06 0.0004 20.6 0.7 1 23 449 471 449 471 0.99

7 12 0.00035 0.027 14.9 2.0 1 23 477 500 477 500 0.97

8 12 3.6e-05 0.0028 18.0 0.3 2 23 711 732 710 732 0.97

9 12 0.061 4.7 7.8 6.3 1 23 738 761 738 761 0.97

10 12 3.6 2.8e+02 2.2 4.3 1 23 852 875 852 875 0.87

11 12 0.0036 0.27 11.7 0.5 3 23 929 949 927 949 0.96

12 12 0.00059 0.045 14.2 4.8 1 23 955 977 955 977 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.015	1.2	9.7	0.8	1	21	97	117	97	119	0.93
2	12	0.0029	0.22	12.0	1.0	1	20	129	148	129	150	0.95
3	12	6.9	5.3e+02	1.4	0.0	2	23	179	205	178	205	0.82
4	12	0.19	14	6.3	2.0	2	20	211	229	211	234	0.91
5	12	0.0035	0.27	11.7	0.1	1	23	417	439	417	439	0.97
6	12	5.2e-06	0.0004	20.6	0.7	1	23	449	471	449	471	0.99
7	12	0.00035	0.027	14.9	2.0	1	23	477	500	477	500	0.97
8	12	3.6e-05	0.0028	18.0	0.3	2	23	711	732	710	732	0.97
9	12	0.061	4.7	7.8	6.3	1	23	738	761	738	761	0.97
10	12	3.6	2.8e+02	2.2	4.3	1	23	852	875	852	875	0.87
11	12	0.0036	0.27	11.7	0.5	3	23	929	949	927	949	0.96
12	12	0.00059	0.045	14.2	4.8	1	23	955	977	955	977	0.99

Sequence Information

Coding Sequence: ATGTGGGACGCAAGCGGCGATGCGAGTTCGCTGCGCAAGAAGTTCCGCCTGAATCGCAGCAATGTCGCTGGTGAATTATCCGAATCGGGTTTTGTCGATGGCAGCGCCAACAGCGGCTTTCTGCTCAGCAACAGCAGCGCTGCAGTCGCTGCTCAGTCGGCATCGGCGTCGTCAGCCCTGCTGCAGGCCTCGTCCAGCAGCTCGGGCGGCTCATCGCCGCAACAGGGCGCCGGGCTATGCCTGTCGAGCGCCGAGTCTGGCATCGGTGCTGGCGAGGATCACATGAAGTATCTCTGCCCCATCTGCGAGGTCGTCTCGGCCACCCCACACGAGTTCACCAATCACATAAGGTGCCACAACTATGCGAACGGCGATACCGAGAACTTCACCTGCCGCATCTGCTCGAAGGTTCTCTCATCAGCCTCATCGCTGGACAGGCACCATGAGCACGACGATGATCACGCCCACTCCGCCTCACACTCGCTGGCCTCAACGCCCTCACCCACACCTCCACCCCCTGCCGTCACCTGCCTAAGCTGCCCTGTCTGCCCCGCCCACTTGGCAGAGCCCTTCGAGACACTGCCCGCACTGTGGCAGCATCTCGATGCGGAGCACGCTGATATACCCGCCAAGTGTCGCGACTGCGAGGTGATCTTCGCCAGCCATCGCCAGCTGCAGGTGCACAACTGCCACCAGCAGCACCGACGTCGCCATCTGCCTCCGCTGCTGGGCAACAGTTCCTCGCCCAAGCAGGTGCGGCAGGAGGACGACGAGGATGAGGATGGTGAATACGATGAGGAGGAGGAGGAGGATGCACAGCAGCAGCGAGTCAAGCAGGAGGAGGACGAGGAGGAGCTGCTGGGCCAGGAGCACCAACAGGCTGATGACTTCTTTCAGCAGTTTCAATATCTCAAGGGCAAAGCAGCGCAGCATGCTGCTGCCACTGCCGCCGCTGCTGCACATGCTCATGCCGCTGCCGCTGCACACGCGGCAGCTGTGGCTGCCTCCCACTCGCACTCGCAGCTGCCTTCCCCCATCAAGCATGAGCCCATGGAGCGAGGGGAACCGTCGCGGGATCTGGCTGACATACAGAGCATACTGAACATGACCAGCTCCAGCTGCACATCCAGTTTCCTGCGCAACTTTGAGCAATCGGTGAACACGCCCTGCTCCAGCCGAGATGGGGATGGGGAGGAGGCACAGGATGCCTTCACCAGTGAGTTCCGTCGCATGAAGCTGCGTGGCGAGTTCCCCTGCAAGCTCTGCACGGCCGTCTTTCCCAATCTGCGTGCCCTCAAGGGACACAATCGCGTGCATCTGGCCGCAGTGGGTGCAGCAGGTCCCTTCCGTTGCAACATGTGTCCCTATGCTGTGTGCGACAAGGCGGCGCTGGTGCGGCACATGCGCACCCACAACGGAGATCGGCCCTATGAGTGCGCTGTGTGCAACTACGCCTTCACCACCAAGGCCAACTGTGAGCGACATCTGCGCAATCGACATGGCAAGACCAGCAGGGATGAGGTGAAGCGGGCGATCATCTATCATCCGGCAGAGGATGCCTCCTCGCAGGATCAGGAGCAGCACAAGTCCGGCACAGATCTGGATTTGAGCTATCGTTCGCTTACTCCTCCTGTGGAGGCACCGCCTGCATCGCAGCTCAAGCACATCTCCACGCCCATTAAGCTGGCCAAGCAGGTGGCTGACACCATCTTGGAGCAGGCCATTAAGGCAGGCGCAGCACAACCAGAGTCCACTCCACCCTCCTCTGCCGCTGCCCCCACGGCCATGAAGTCGATGATAGCACAAGCCGATGCAGTTGCCAAGTCCCTCAAGGATGTGGCCAGTTCCCCCTTCAAGGATGACTCACAGGATCTGGTGCCAGTGGCTAAGCTGGTGGACAATGCCACCAGCAATCAGTCGATGTCCTCATTCAACAATTATTTTCGTCCCAGCGACGTGGTGAATCACATGGAGCAGAGCGACGAGGAGGGACTTGTCGCTTCGGGTAGTGCCAGCGAGAGCAACAACTCGGGCACCGAGGATGTGGCTGCCTCAGCGACTGCCAACGGTGGCTCCTCCTCCAGTGATACCAAGAAGAAGTCCGCTTACAGTCTGGCACCCAATCGGGTCAGTTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCACTGCGTCGTCACATACTCACCCACACCGGGCAGAAGCCCTTCAAGTGCTCCCACTGTCCACTGCTCTTCACCACCAAGTCCAATTGCGATCGTCATCTGCTGCGCAAGCACGGCAACGTCGAGTCCGCCATGTCTGTCTATGTGCCGGCCGAGGATGTGCGTGAGCCCATCCCAGTGCCCAAGTCCGTGGAGGAGATTGAGCTGGAGGAGCAGCGGCGTCGACGTCGTGCACTCGAGGAGGAGCGTGAGCGAGAGCGGGAACGAGAGCGTGAACTGGAGCGTGAGCGTGAGCTGGAACTGGAACGTGAGCCGGGCGCCGGAGGCAGTGCCTCCTCGCCAGCACCGGGTGCAGGTGATGCCCAGCTGGGCTCGGATCTGCCCTACAAGTGCCATCTGTGCGAGTTCTCCTTCGGCGAGCGGATGCAGTGCCTCGAGCACATCAAGCAGCAGCACGCTCAGGAGTTTGCCCTCCTCCTGGCCAAGGGTGCCATCGAAACGGAGCCATCCGCGGCTACAGCTCCTCCCTCTTCCTCAGCTCATTCGGATGAGGAGGGTGCTCCACTGCGCGGTGCAGGGGGCAAGTACCCCGACTATAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACTGAGGATCTGCGGCGTCATATGCGCACCCACTCGGGCGAGAGACCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCCTGAAGCACTCCATGCTGCGTCACATGAAGAAGCACAGCGGTGGAGGGCGTGGCAGCGGAGGCAGTCACAATGGCGATGCGGGTTGTCAATCCGATTGCTCTGATGATGAGCACTTGGCCAAGCTGCTGGGCGTGGATAAGTAG
Protein Sequence: MWDASGDASSLRKKFRLNRSNVAGELSESGFVDGSANSGFLLSNSSAAVAAQSASASSALLQASSSSSGGSSPQQGAGLCLSSAESGIGAGEDHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHHEHDDDHAHSASHSLASTPSPTPPPPAVTCLSCPVCPAHLAEPFETLPALWQHLDAEHADIPAKCRDCEVIFASHRQLQVHNCHQQHRRRHLPPLLGNSSSPKQVRQEDDEDEDGEYDEEEEEDAQQQRVKQEEDEEELLGQEHQQADDFFQQFQYLKGKAAQHAAATAAAAAHAHAAAAAHAAAVAASHSHSQLPSPIKHEPMERGEPSRDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSRDGDGEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLAAVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSRDEVKRAIIYHPAEDASSQDQEQHKSGTDLDLSYRSLTPPVEAPPASQLKHISTPIKLAKQVADTILEQAIKAGAAQPESTPPSSAAAPTAMKSMIAQADAVAKSLKDVASSPFKDDSQDLVPVAKLVDNATSNQSMSSFNNYFRPSDVVNHMEQSDEEGLVASGSASESNNSGTEDVAASATANGGSSSSDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPAEDVREPIPVPKSVEEIELEEQRRRRRALEEERERERERERELERERELELEREPGAGGSASSPAPGAGDAQLGSDLPYKCHLCEFSFGERMQCLEHIKQQHAQEFALLLAKGAIETEPSAATAPPSSSAHSDEEGAPLRGAGGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGGRGSGGSHNGDAGCQSDCSDDEHLAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01554184;
90% Identity: -
80% Identity: -