Basic Information

Insect: Zaprionus nigranus
Gene Symbol: -
Assembly: GCA_018903425.1
Location: JAEIGD010000001.1:8001892-8006959[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.044 4 8.3 0.7 1 23 212 234 212 234 0.91

2 27 0.14 13 6.7 2.2 1 23 240 262 240 262 0.97

3 27 0.044 4 8.3 0.7 1 23 338 360 338 360 0.91

4 27 0.0035 0.32 11.8 1.8 1 23 366 388 366 388 0.98

5 27 0.27 25 5.8 1.3 2 23 420 441 419 441 0.96

6 27 0.034 3 8.7 1.9 1 23 514 537 514 537 0.91

7 27 1.4 1.3e+02 3.6 0.9 2 21 548 567 547 568 0.92

8 27 0.67 61 4.6 3.1 1 23 607 629 607 629 0.97

9 27 0.00079 0.072 13.8 1.7 1 23 708 731 708 731 0.93

10 27 0.74 67 4.5 0.1 1 22 739 760 739 760 0.90

11 27 1.7 1.6e+02 3.3 5.7 1 23 769 792 769 792 0.96

12 27 0.00022 0.02 15.6 0.2 2 23 822 843 821 843 0.97

13 27 1.4e-05 0.0013 19.3 1.2 1 23 849 871 849 871 0.98

14 27 0.019 1.8 9.4 1.1 1 23 1014 1037 1014 1037 0.94

15 27 0.056 5 8.0 2.1 1 21 1044 1064 1044 1065 0.94

16 27 0.16 15 6.6 0.3 1 23 1074 1097 1074 1097 0.90

17 27 7.1e-05 0.0064 17.1 4.6 1 23 1123 1145 1123 1145 0.97

18 27 0.18 17 6.4 3.1 1 23 1152 1174 1152 1174 0.97

19 27 0.034 3.1 8.7 0.0 2 21 1201 1220 1200 1221 0.93

20 27 0.012 1.1 10.1 3.9 1 23 1266 1289 1266 1289 0.96

21 27 0.0012 0.11 13.3 0.9 1 23 1326 1349 1326 1349 0.98

22 27 0.0003 0.027 15.2 4.4 1 23 1374 1397 1374 1397 0.98

23 27 1.1e-05 0.001 19.6 0.1 2 23 1423 1444 1422 1444 0.95

24 27 4.4e-05 0.004 17.8 3.8 1 23 1450 1472 1450 1472 0.99

25 27 2.4e-06 0.00022 21.7 2.3 1 23 1478 1500 1478 1500 0.97

26 27 5.6e-08 5e-06 26.9 2.4 1 23 1506 1528 1506 1528 0.99

27 27 0.00049 0.045 14.5 0.4 1 22 1534 1555 1534 1558 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.044	4	8.3	0.7	1	23	212	234	212	234	0.91
2	27	0.14	13	6.7	2.2	1	23	240	262	240	262	0.97
3	27	0.044	4	8.3	0.7	1	23	338	360	338	360	0.91
4	27	0.0035	0.32	11.8	1.8	1	23	366	388	366	388	0.98
5	27	0.27	25	5.8	1.3	2	23	420	441	419	441	0.96
6	27	0.034	3	8.7	1.9	1	23	514	537	514	537	0.91
7	27	1.4	1.3e+02	3.6	0.9	2	21	548	567	547	568	0.92
8	27	0.67	61	4.6	3.1	1	23	607	629	607	629	0.97
9	27	0.00079	0.072	13.8	1.7	1	23	708	731	708	731	0.93
10	27	0.74	67	4.5	0.1	1	22	739	760	739	760	0.90
11	27	1.7	1.6e+02	3.3	5.7	1	23	769	792	769	792	0.96
12	27	0.00022	0.02	15.6	0.2	2	23	822	843	821	843	0.97
13	27	1.4e-05	0.0013	19.3	1.2	1	23	849	871	849	871	0.98
14	27	0.019	1.8	9.4	1.1	1	23	1014	1037	1014	1037	0.94
15	27	0.056	5	8.0	2.1	1	21	1044	1064	1044	1065	0.94
16	27	0.16	15	6.6	0.3	1	23	1074	1097	1074	1097	0.90
17	27	7.1e-05	0.0064	17.1	4.6	1	23	1123	1145	1123	1145	0.97
18	27	0.18	17	6.4	3.1	1	23	1152	1174	1152	1174	0.97
19	27	0.034	3.1	8.7	0.0	2	21	1201	1220	1200	1221	0.93
20	27	0.012	1.1	10.1	3.9	1	23	1266	1289	1266	1289	0.96
21	27	0.0012	0.11	13.3	0.9	1	23	1326	1349	1326	1349	0.98
22	27	0.0003	0.027	15.2	4.4	1	23	1374	1397	1374	1397	0.98
23	27	1.1e-05	0.001	19.6	0.1	2	23	1423	1444	1422	1444	0.95
24	27	4.4e-05	0.004	17.8	3.8	1	23	1450	1472	1450	1472	0.99
25	27	2.4e-06	0.00022	21.7	2.3	1	23	1478	1500	1478	1500	0.97
26	27	5.6e-08	5e-06	26.9	2.4	1	23	1506	1528	1506	1528	0.99
27	27	0.00049	0.045	14.5	0.4	1	22	1534	1555	1534	1558	0.91

Sequence Information

Coding Sequence: ATGTTGCCGACAGATATTTGTCGCACTTGTGCGCAGCAAACTGATAACTTGCTGGCGCTTTCCACATGTATTGAGACATACGTCAATAAAAGTATCAGCGAGATGCTGCATGAATTGACTCACAATGATCCGATGGAACTCGCAGTTGATGATCTGCCGCAATATTTGTGTGCCGACTGCTTGCCCAAGTTGCAAAATGCCTATGGGTTTGTGTTGCAAGCACGTCAAGTACAGGAGCAACTGTTGCTTGAGCTACGCAAGGATTTGCTGGCACCACAATGTTTGGATGAGACACCCATCGACATGGCATTGCAGTCCATCAAGACCGAAGTGGACATACCCTTCGATGAAGAAGATACTGAAATTGCTGTTCCAATGGACACACAGTCTTTTGTATGTGCCTTAAAATTGCAACCAGAAAGCGACAGTGAGAGTAATCAGGGCGATGTCGATGCAGATGATGATGAGGATACCCAACCAATGCAACGTAGGCGCAGTGCGCGCAAGCCCAAACTTTCCATTGACAGCGGAGATGAAGCAGCATCGGGCAATTTAAAGCCAATACTGATTAAACGTCGGCGTGGCCGGCCAGCTCGTGTCACCAGAGATCAAACCACACCCGAAAAGGGACGATTTCCTTGCGAAGTATGCGGTAAAACATTCTTGTGGCACCGCGACATGCAACGTCATGCCCGCATTCACTACGAGGAGCCTTCGTATGTGTGCGAGCAATGTGGCAAGGGTTACCTACGTAAAGACAAATATATATGCCATCTGCGCATGCATGAGAAGCACAGAGCCAAGAGTGAGAGTAATCAGGGCGATGCCGATGCAGATGATGATGAGGATCTCCAACCAATGCAACGTAGGCACAGTGGGCGCAAGCCCAAACTTTCCATTGACAGCGGAGATGAAGCAGCATCGGCCGATTTAAAGCCAATAGTTATTAAACGTCGGCGTGGCCGTCCAGCTCGTGTCACCAGGGATCAAACCACACCCAAAGAGGGACGATTTCCTTGCGAAGTATGCGGTAAAACGTTCTTGTGGCACCGCGACATGCAACGTCATGCCCGCATACACTTCGAGGAGCCCTCGTATGTGTGCGAGCAATGTGGCAAGGGTTACATACGTAAAGACAAATATGTATGCCATCTGCGCATGCATGAGCAGCGCCGAGCCAAGAGTGAGGCCCTTACTCTGACCCTGGAGTGGCGATTTGCTGAACGTCTTTATAGTTCAGGTCGCCTCAAGCGCGTTGAATGTAAGCTGTGTGGCTTCCGATGCCAACGCATACTCGAGCTGCGTGAGCATCTATCCAGTCATATCACAGCTGAAACATTGTCCGATCTTAGTGCCGACAGCGATGTCATCAGAGAACAGTTTCCCAACCATCAAGACTTGACACAAATCAGGCAAATGATCTGCGCAGACATTGCTAAAGGACGAGAACACTTGGATAAATACTGTTCAGTGGTTAATGCCCATGGCTATGAGCTCTGCCTGAGTGACTCGGACGAGGAAATAACTGGCATAACGTCTTATGAATGCCTGCCCTGCAACGCCTCGTTTACTCGCAAACATCGTTTAATGCGCCACACACTGGAGACGCACACTCAATCAACAGATGAAGCTGCCTGGCTTCGCTGCACTGGCTGCCAAATTGGCTTTGTGTGTCCTAAGTTGCTGGAGCAGCATCAGCATTCTCAGTGTTACAGTCAATTCAAGCAATATAGCTGTGCCAACTGTCCTGGTAAATTTATTTGGGAACAGAATCTTAGGCAACACGCTTGCTGCGAGGGGAAGAAGATTCGTCGTCAGTTCAATTGCTGTCTGTGCGATGAGCAATTGGAAAGCATGGCTACTCTAAGAAGCCACTTGCACACTCATCGGGATGGACGCACCGGCATAGATCCAAAGCAATCTTCTGCCTTTCTTCGTTGCTTTTATCCCGATGGCCTCGACTGCAACTGGACAGAGCTAAGTGGAAACATTGCGAATGACTTTGAGGCTGGGGATTATGGACGATACTTTAATGCCAGTACAACTGCTGGTCAGGAGCTGGACTTCTTAGCCTCGGATGCTGAGTTAAGCGATAGTGAGACAACATCACCCTCAGCTCTGCACACTTGTGATTTGTGTGGAGAGACCGCCACTCGCCTTACCCACTTGCGGCGTCATCAGGAAGATGAACACAGTGACCTTAAGGCCCTTTCTCATGTCTGTGATACATGTGGCATGGGATTTGTTGCAGATTCGATACTCCAATGGCATCGTCGAACAGTTTGTTGCAAGCGACATACAAAGTATCATTGCACGGAGTGCAATCTTCACTTTGTATGGCAATCGAACCACGAGCGGCATATGAAGTTGATGCACGGAAAGACGACTGACGATGGAAAAGCGAAAGAGTTAGAACGGCAGAAAGAAAGGAGCAGACGACAGCGAGAGTCGTCACTCAAGCTGCAGTGCGGCGAGTGCAATAAAGTTTTCATCTGGCCAAAGGATCTTACTCGTCACAAGCGCATTCATCAAACAACAGAAAAATACGATTGTCCGTATTGTGAACGCAAGTTCTTACGCAAGGATAACCTCAAGTCACATTTGCGGGTGCATGGCGAGCAACCGGAGCCACAGGAGACGGCAAGTAGGACCAAGAGTGACCCAGACATCGTGGTAATGCAAGACATGCCAGCTGTGTGGAGCCAACTATGCCGTCCCAATGGCTGCAAGCAAATTAAATGCATGATTTGTGCATCGTACCACACTAAAATCTCTGATCTGCGCACTCATCTGATTTCACATCAGTTTGCGCTGCAGTTTGTGGATGATCATCCCAAGTCAGAGCTCCTATATCCGGAACTGCGAAGTGGGGATATGGACAGTGAACAATTGATTGAGCGCATCCAATTTGATTTGGCTAAAGGGGATGAGCTGGAAAGATTCGTTTCGATCACAAATGAAGCAGGTATTGAGCTTAGCCTGGATAGTAGTGAAACTGATACGGATTCGGATTCGGCGGAAACAACTGGAAGTCAAGTGTACGACTGTGATCTATGCCAATTGAAGGTGTCGCGCAAGCACCTGCTCTACGCACACCAACTGGAGCAGCATGCCTGGCAGGAAGCAAGTCATGTCTGTAGCCACTGCCAGGCGAGATTCGTAAGTGAACAGTTGCTGGATCATCATTATCGCTCACTTTGTGGCAATCCACTAAAGCGTTTTCTTTGCCGCAAATGTCCACTACGTTTTCGCTGGCGCGATAATCTTAGGTTGCACGCAGACGTGGCACATGCGGAAGTCGTTGCCGAGGAACTGCCGAGTGGAGGTATTCAATTGAATGGGACCAGCTTGCTGCCTGTGGTCAGCTACGATTGTCACGAGTGTAAGCGAAGCTTCAAAATGCAGAAGGATCTTACACGCCACAAGTTGATGCATGCTCAGGAGTCGAGCATTTATCGCTGTCGCTGGTGTTCCAGACGCTTCTATCGCGAGGCCAACCATCTGCAACACATCGAGCGACATGGCATCACTGCTGCTCAGCTGCCCTATGCGGAGGCCCTGCTGAATGCAAGTGGCCATCCAAATGGAACAAAGTGCATCCAGTGCAAGGTGTGCAATGTGCAATTTCCCACCATTGCCGCCCTCCGTTCACATCTGTTGTCTGTGCCCAGTGGCACACACCACGAGATTGGATCAATGCTTAACTACTCGATCACCAACACGTTGGGCTATGAACTTCACCTGGAGGACTCGGAAACGGATGAAGAGGCCAAGCCACCGGACACACCAGCACACTACACTTGCGGCATGTGCCAGTTGCGGTGTGTGCGGAAATATGAACTGCATCAGCACCAGCAAGCGATGCATCGACTGGAACGGATAAAAGAGGGCTGTGATGAGTGCATCTTCAAGAGTGTTTCCCCGGATCTCATTGCCTACCACAAACGAGTACAATGTGGCAACTTGGAGAAGCAATTTAAGTGTACAACATGTGGCTACAAGTTCATGTGGGAATCAAATTTGTTGCTGCACATGCAGCGAGAACACACAACTGGCAACGTGCAAACAAAGGACGGAGAAACGGTAGCGAACCCGGTTGAAAGTACTAGCTGCCAGATCTTCAAATGCGCTCAGTGTCCACGGAAATACAATCGAAAGGATCGATTGACGGCCCATATGAAGAAGTGTCACGGACCAGGCGCAATTGGCCCAGCAACAAAAACGCCAAAGGCCTCATACAGTGGTGCCAAACAGCAGAATAGTTTTCTTTGTGCCTTTTGTGGAAAGGCGGTAAGCTCCTCGTCGAATCTTATTGTACACATACGACGCCACACTGGCGAGAAACCTTTCAAGTGTGACTTTTGTGACAAGGCCTTTCCACGCTCCTCCGATCTCCAGTGCCATAGACGCACCCATACAGGCGAGCGACCGCACGTGTGCACCGTGTGCAAGAAGGGATTCGCTCGCTCGTACAAACTGCAGCAGCACATGCGCATTCATAACGGCGAACGTCCCTACAAGTGCACCTATTGCGACAAGAGCTTTACACAGTCCAACGACCTGACCCTTCACATCCGTCGTCACACGGGCGAGCGACCTTATCAGTGCAACACCTGCGGCGAGCGGTTTATCCAGGGCACAGCCCTTAAGAACCATCGCCAGCAGAGTGGACACAGCGAGGACACCGAGGATCAAGCTAAAAATAACTAA
Protein Sequence: MLPTDICRTCAQQTDNLLALSTCIETYVNKSISEMLHELTHNDPMELAVDDLPQYLCADCLPKLQNAYGFVLQARQVQEQLLLELRKDLLAPQCLDETPIDMALQSIKTEVDIPFDEEDTEIAVPMDTQSFVCALKLQPESDSESNQGDVDADDDEDTQPMQRRRSARKPKLSIDSGDEAASGNLKPILIKRRRGRPARVTRDQTTPEKGRFPCEVCGKTFLWHRDMQRHARIHYEEPSYVCEQCGKGYLRKDKYICHLRMHEKHRAKSESNQGDADADDDEDLQPMQRRHSGRKPKLSIDSGDEAASADLKPIVIKRRRGRPARVTRDQTTPKEGRFPCEVCGKTFLWHRDMQRHARIHFEEPSYVCEQCGKGYIRKDKYVCHLRMHEQRRAKSEALTLTLEWRFAERLYSSGRLKRVECKLCGFRCQRILELREHLSSHITAETLSDLSADSDVIREQFPNHQDLTQIRQMICADIAKGREHLDKYCSVVNAHGYELCLSDSDEEITGITSYECLPCNASFTRKHRLMRHTLETHTQSTDEAAWLRCTGCQIGFVCPKLLEQHQHSQCYSQFKQYSCANCPGKFIWEQNLRQHACCEGKKIRRQFNCCLCDEQLESMATLRSHLHTHRDGRTGIDPKQSSAFLRCFYPDGLDCNWTELSGNIANDFEAGDYGRYFNASTTAGQELDFLASDAELSDSETTSPSALHTCDLCGETATRLTHLRRHQEDEHSDLKALSHVCDTCGMGFVADSILQWHRRTVCCKRHTKYHCTECNLHFVWQSNHERHMKLMHGKTTDDGKAKELERQKERSRRQRESSLKLQCGECNKVFIWPKDLTRHKRIHQTTEKYDCPYCERKFLRKDNLKSHLRVHGEQPEPQETASRTKSDPDIVVMQDMPAVWSQLCRPNGCKQIKCMICASYHTKISDLRTHLISHQFALQFVDDHPKSELLYPELRSGDMDSEQLIERIQFDLAKGDELERFVSITNEAGIELSLDSSETDTDSDSAETTGSQVYDCDLCQLKVSRKHLLYAHQLEQHAWQEASHVCSHCQARFVSEQLLDHHYRSLCGNPLKRFLCRKCPLRFRWRDNLRLHADVAHAEVVAEELPSGGIQLNGTSLLPVVSYDCHECKRSFKMQKDLTRHKLMHAQESSIYRCRWCSRRFYREANHLQHIERHGITAAQLPYAEALLNASGHPNGTKCIQCKVCNVQFPTIAALRSHLLSVPSGTHHEIGSMLNYSITNTLGYELHLEDSETDEEAKPPDTPAHYTCGMCQLRCVRKYELHQHQQAMHRLERIKEGCDECIFKSVSPDLIAYHKRVQCGNLEKQFKCTTCGYKFMWESNLLLHMQREHTTGNVQTKDGETVANPVESTSCQIFKCAQCPRKYNRKDRLTAHMKKCHGPGAIGPATKTPKASYSGAKQQNSFLCAFCGKAVSSSSNLIVHIRRHTGEKPFKCDFCDKAFPRSSDLQCHRRTHTGERPHVCTVCKKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRQQSGHSEDTEDQAKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01551132;
90% Identity: iTF_01551864;
80% Identity: -