Zdav012272.1
Basic Information
- Insect
- Zaprionus davidi
- Gene Symbol
- -
- Assembly
- GCA_018903715.1
- Location
- JAEIGL010000003.1:6730118-6735198[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.043 3 8.3 0.7 1 23 211 233 211 233 0.91 2 27 0.057 4 8.0 1.7 1 23 239 261 239 261 0.97 3 27 0.043 3 8.3 0.7 1 23 337 359 337 359 0.91 4 27 0.057 4 8.0 1.7 1 23 365 387 365 387 0.97 5 27 0.48 34 5.0 0.8 2 23 419 440 418 440 0.94 6 27 0.033 2.3 8.7 1.9 1 23 513 536 513 536 0.91 7 27 1.1 78 3.9 0.6 2 20 547 565 546 567 0.92 8 27 0.14 9.7 6.7 0.8 1 23 611 633 611 633 0.97 9 27 4.3e-05 0.003 17.8 0.7 1 23 712 735 712 735 0.93 10 27 0.73 51 4.5 0.1 1 22 743 764 743 764 0.90 11 27 0.96 67 4.1 3.0 1 23 773 796 773 796 0.95 12 27 7.6e-05 0.0053 17.0 0.2 2 23 826 847 825 847 0.97 13 27 5.9e-05 0.0041 17.4 1.9 1 23 853 875 853 875 0.98 14 27 0.019 1.3 9.4 1.1 1 23 1018 1041 1018 1041 0.94 15 27 0.16 12 6.5 2.4 1 21 1048 1068 1048 1069 0.93 16 27 0.083 5.8 7.4 1.0 1 23 1078 1101 1078 1101 0.92 17 27 7e-05 0.0049 17.1 4.6 1 23 1127 1149 1127 1149 0.97 18 27 0.18 13 6.4 3.1 1 23 1156 1178 1156 1178 0.97 19 27 0.034 2.4 8.7 0.0 2 21 1205 1224 1204 1225 0.93 20 27 0.012 0.83 10.1 3.9 1 23 1270 1293 1270 1293 0.96 21 27 0.0021 0.15 12.4 0.7 1 23 1330 1353 1330 1353 0.96 22 27 0.00029 0.02 15.2 4.4 1 23 1378 1401 1378 1401 0.98 23 27 1.1e-05 0.00077 19.6 0.1 2 23 1427 1448 1426 1448 0.95 24 27 4.3e-05 0.003 17.8 3.8 1 23 1454 1476 1454 1476 0.99 25 27 2.4e-06 0.00016 21.7 2.3 1 23 1482 1504 1482 1504 0.97 26 27 5.5e-08 3.8e-06 26.9 2.4 1 23 1510 1532 1510 1532 0.99 27 27 0.00049 0.034 14.5 0.4 1 22 1538 1559 1538 1562 0.91
Sequence Information
- Coding Sequence
- ATGTTACCGACAAATATCTGTCGCACTTGTGCGCAGCAAACTGATGACTTGCTGGCGCTTTCAACATGTATTGAGACATACGTCAATAAAAGTATCAGCGAGATGCTGCATGAATTGACTCACAATGATCCGATGGAACTCGCAGTTGATGATCTGCCACAATATTTGTGTGCCGACTGCTTGCTCAAGTTGCAAAATGCCTACGGGTTTGTGGTGCAAGCACGACAAGTGCAGGAGCAACTGTTGCTCGAGGTACGCAAGGATTTGCTAACACCACAATGTTTGGATGAGACACCCATCGACATGGCATTGCAGTCCATCAAAACCGAAGTGGACATACCCTTTGATGAAGAAGATATTGAAAGTGCTGTTCCAATGGACACACAGTCACTTGTATGTGTGGCAGCCCTAAAATTGCAACCAGAAAGCGACAGTGAGAGTAATCAGGGCGATGTCGATGCAGATGATGATGAGGATCCCCAACCAAGGCGCAGTGCGCGCAAGCCCAAACTTTCCATGGACAGCGGAGATGAAGCAACATCGGGCAATTTAAAGCCAATAGTGATTAAACATCGGCGTGGCCGTCCAGCTCGTGTCACCAGAGATCAAACCACATCCGAAGAGGGACGATTTCCTTGCGAAGTATGCGGTAAAACGTTCTTGTGGCACCGCGACATGCAACGTCATGCCCGCATACACTACGAGGAGCCTTCGTATGTGTGCGAGGAATGTGGCAAGGGTTACCTACGTAAAGACAAATACATATGCCATCTGCGTATGCATGAGAAGCGCCGGGCAAAGAGTGAGAGTAATCAGGGCGATGTCGATGTAGATGATGATGACGATTCCCAACCAATGCAACGTAGGCGCAGTGCGCGCGAGCCCAAACTTTCCATTGACAGCGGAGATGAAGCAGTACCGGGCAATTTAAAGCCAATAGTGATAAAACGTCGGCGTGGCCGTCCAGCTCGTGTCACCAGAGATCAAACCGCATCCGAAGAGGGACGATTTCCTTGCGAAGTATGCGGTAAAACGTTCTTGTGGCACCGCGACATGCAACGTCATGCCCGCATACACTACGAGGAGCCTTCGTATGTGTGCGAGGAATGTGGCAAGGGTTACCTACGTAAAGACAAATATATATGCCATCTGCGCATGCATGAGAAGCACAAAGCCAAGAGTGAGGCCCTTCCTCTGAGCCTGGAGTGGCGATTTGCTGAACGGCTATATAGTTCAGGTCGCCTCAAGCGCATGGAATGTAAGCTGTGCGGCTTGCGATGCCAACGCATACTCGAGCTGCGTGAGCATCTGTCTGGCCACATCAAAGCTGAAACATTGTCCGATCTTAGTGCCGACAGCGATGTCATCAGAGAACAGTTTCCCGACCATCAAGACTTGGCACAGATCAAGCAAATGATCTGTGCGGACATTGCTAAAGGACGAGAACACTTGGATAAATACTGTTCAGTGGTTAATGCCCATGGCTATGAGCTCTGCCTGAGTGACTCGGACGAGGAAATAACTGGCATAACGCCTTATGAATGCCTGCCCTGCAACGCCTCTTTTACTCGCAAACATCGTTTAATGCGTCACACACTGGAGACGCACACTCAATCAACAGATGAAGGCGCGTGGCTTCGCTGCAATGGCTGCCAAATAGGCTTTGTGTGTTCTAAGATGCTGGAGCAGCATCAGACTTCCCAGTGTTACAGCGAATTCAAGCAATATAGCTGTGCCACCTGTCCTGGTAAATTTATTTGGGAACAGAATCTTAGGCAACACGCTTGCTGCGAGAGAAAAAAGATTGTGGCGGGTGAGGAACGTCGTCAGTTCAATTGCTGTCTGTGCGATGAGGATTTGGAAAGCATGGCTACTCTGAGAAGCCACTTGCTCACTCATCGGGATGGACGCACCGGCATAGATCCAAAACAATCTTCTACCTTTCTTCGTTGCTTTTATCCCGATGGCCTCGACTGCAACTGGACAGAGCTAAGTGGGAACATTGCGAATGACTTTGAGGCTGGGGATTATGGACGATATTTTAATGCCAGTACAACTGCTGGACAGGAGCTGGACTTCTTAGACTCGGATACTCAGTTAAGCGATAGTGAGACAACATCACCCTTAGCTGTGTACACTTGTGATTTGTGTGGTGAGACCGCAACTCGCCTTAGCCACTTGCGGCGTCATCAGGAAGATGAACACAGTGACCTGAAGGCCCTTCCTCATGTCTGTGATACATGTGGCATGGGATTTGTTGCAGATTCTATACTCCAATGGCATCGTCGAACAGTTTGTTGCAAGCGACATGTGAAGTATCATTGCACGGAGTGCAACCTTTACTTTGTATGGCAATCGAACCACGAGAGGCATATGCAGTTGGTGCACGGAAAGGCGATTGACGATGGAAAAGCGAAAGAGTTAGAACGGCAAAGACAAAGGAGCAGACGACAGCGAGAGTCGTCACTGAAGCTGCAGTGCGACGAGTGCGATAAGGTTTTCATCTGGCCAAAGGATCTTACGCGTCACAAGCGCATTCATCAGAATACAGAAAAATACGATTGTTCGTATTGTGAACGCAAATTCTTACGCAAGGATAACCTCAAGTCACATTTGCGGGTGCATGGCGAGCAACAGCAGCCTCAGGAGACGGCAAGTAGGACCAATAGTGACCCAGACATTGTGGTAATGCAAGACATGCCAGCTGTGTGGAGCCAACTATGCCGTCCCAATGGCTGCAAGCAAATAAAATGCATGATTTGCTCATCGTACCACACAAAGATCTCTGATCTGCGCACTCATCTGATTTCGCATCAGTTTGCGATGCAGTTTGTGGATGATCATCCCAAGTCAGCGCTCCTATATCCGGAACTGCGAGGCGGTGATATGGACAGTGAGCAGTTGATTGAGCGCATCCAATTTGATTTGGCTAAGGGGGATGAGCTTGAAAGATTCGTTTCGATAACCAATGAAGCGGGTATTGAGCTAAGCCTGGACAGTAGTGAAACTGATTCGGATTCGGATTCGGCAGAAACAACTGGAAGTCAAGTGTACGACTGCGATCTATGCCAATTGAAGGTGTCGCGCAAGCACCTGCTCTACGCACACCAGCTCGAGCAGCATGCCTGGCAGGAAGCTAGTCATGTCTGTAGACATTGCCAGGCGAGATTCGTAAGTGAACAGTTGCTGGATCATCATTATCGCTCACTTTGTGGTAATCCACTCAAGCGTTTCCATTGCCGCAAATGTCCGCTACGTTTTCGCTGGCGCGACAATCTCAAGTTGCACGCAGACGTGGCACATGCGGAAGTTGTTGCCGAGGAACTGCCGAGTGGAGGTATTCAGTTGAATGGAACCAGCTTGCTGCCGGTTGTCAGCTATGATTGTCACGAGTGTAAGCGAAGCTTCAAAATGCAGAAGGATCTCACACGCCACAAGTTGATGCATGCTCAGGAGTCCAGCATTTATCGCTGTCGCTGGTGTTCCAGACGCTTTTATCGCGAGGCCAACCATCTGCAACACATCGAGCGACATGGCATCACTGCTGCTCAGCTGCCATATGCGGAGGCCCTGCTCAATGCAAGTGGCCAGCCAAATGGAACAAAGTGCATCCAGTGCAAGGTGTGCAATGTGCAATTTCCGACCATTGCCGCCCTCCGTTCACACTTGTTGTCTGTGCCGAGTGGCACACACCACGAGATTGGATCAATGCTCAACTACTCGATCACCAATAAGTTGGGCTATGAACTTCATCTGGAGGACTCGGAAACGGACGAAGAAGCCAAGCCACCGGACACACCAGCACACTACACTTGCGGCATGTGTCAATTGCGTTGTGTGCGAAAATATGAACTGCATCAGCATCAGCAAGCGATGCATCGACTGGAACGGATAAAAGAGGGCTGTGATGAGTGCATCTTTAAGAGTGTTTCCCCGGATCTCATTGCCTACCACAAACGAGTACAATGTGGCAACTTGGAGAAGCAATTCAAGTGTACAACATGTGGCTATAGGTTTATGTGGGAATCAAATTTATTGCTGCACATGCAGCAGGAACACACAACTGGCAATGTGCAGGCAAAGAGCAGTGAGACGGTAGCGGACCCAGTTGAAAGTGCTAGCTGCCAGATCTTCAAATGCGCTCAGTGTCCACGGAAATACAATCGAAAAGATCGATTGACGGCCCATATGAAGAAGTGTCATGGACCAGGCGCAATTAGCTCAGCAATAAAAACGCCAAAGGCCTCATCCAGCGGTGCCAAACAGCAGAATAGTTTCCTATGTGCCTTTTGTGGTAAGGCGGTGAGCTCCTCGTCGAATCTTATTGTACACATACGACGCCACACTGGCGAGAAACCGTTTAAGTGTGACTTTTGTGACAAGGCCTTCCCACGCTCCTCCGATCTCCAGTGCCATAGACGCACCCATACAGGCGAGCGACCCCACGTCTGCACCGTGTGCAAGAAGGGATTCGCTCGCTCCTACAAACTGCAACAACACATGCGCATTCATAGCGGCGAACGTCCCTACAAGTGCACCTATTGCGACAAGAGCTTTACACAGTCCAACGACCTGACCCTTCACATCCGTCGTCACACGGGCGAGCGACCTTATCAGTGCAACACCTGCGGCGAGCGGTTTATCCAGGGCACAGCCCTTAAGAACCATCGCCAGCAGAGTGGACACAGAGAGGACACCGAAGAGCAAGCTAAAAATAACTAA
- Protein Sequence
- MLPTNICRTCAQQTDDLLALSTCIETYVNKSISEMLHELTHNDPMELAVDDLPQYLCADCLLKLQNAYGFVVQARQVQEQLLLEVRKDLLTPQCLDETPIDMALQSIKTEVDIPFDEEDIESAVPMDTQSLVCVAALKLQPESDSESNQGDVDADDDEDPQPRRSARKPKLSMDSGDEATSGNLKPIVIKHRRGRPARVTRDQTTSEEGRFPCEVCGKTFLWHRDMQRHARIHYEEPSYVCEECGKGYLRKDKYICHLRMHEKRRAKSESNQGDVDVDDDDDSQPMQRRRSAREPKLSIDSGDEAVPGNLKPIVIKRRRGRPARVTRDQTASEEGRFPCEVCGKTFLWHRDMQRHARIHYEEPSYVCEECGKGYLRKDKYICHLRMHEKHKAKSEALPLSLEWRFAERLYSSGRLKRMECKLCGLRCQRILELREHLSGHIKAETLSDLSADSDVIREQFPDHQDLAQIKQMICADIAKGREHLDKYCSVVNAHGYELCLSDSDEEITGITPYECLPCNASFTRKHRLMRHTLETHTQSTDEGAWLRCNGCQIGFVCSKMLEQHQTSQCYSEFKQYSCATCPGKFIWEQNLRQHACCERKKIVAGEERRQFNCCLCDEDLESMATLRSHLLTHRDGRTGIDPKQSSTFLRCFYPDGLDCNWTELSGNIANDFEAGDYGRYFNASTTAGQELDFLDSDTQLSDSETTSPLAVYTCDLCGETATRLSHLRRHQEDEHSDLKALPHVCDTCGMGFVADSILQWHRRTVCCKRHVKYHCTECNLYFVWQSNHERHMQLVHGKAIDDGKAKELERQRQRSRRQRESSLKLQCDECDKVFIWPKDLTRHKRIHQNTEKYDCSYCERKFLRKDNLKSHLRVHGEQQQPQETASRTNSDPDIVVMQDMPAVWSQLCRPNGCKQIKCMICSSYHTKISDLRTHLISHQFAMQFVDDHPKSALLYPELRGGDMDSEQLIERIQFDLAKGDELERFVSITNEAGIELSLDSSETDSDSDSAETTGSQVYDCDLCQLKVSRKHLLYAHQLEQHAWQEASHVCRHCQARFVSEQLLDHHYRSLCGNPLKRFHCRKCPLRFRWRDNLKLHADVAHAEVVAEELPSGGIQLNGTSLLPVVSYDCHECKRSFKMQKDLTRHKLMHAQESSIYRCRWCSRRFYREANHLQHIERHGITAAQLPYAEALLNASGQPNGTKCIQCKVCNVQFPTIAALRSHLLSVPSGTHHEIGSMLNYSITNKLGYELHLEDSETDEEAKPPDTPAHYTCGMCQLRCVRKYELHQHQQAMHRLERIKEGCDECIFKSVSPDLIAYHKRVQCGNLEKQFKCTTCGYRFMWESNLLLHMQQEHTTGNVQAKSSETVADPVESASCQIFKCAQCPRKYNRKDRLTAHMKKCHGPGAISSAIKTPKASSSGAKQQNSFLCAFCGKAVSSSSNLIVHIRRHTGEKPFKCDFCDKAFPRSSDLQCHRRTHTGERPHVCTVCKKGFARSYKLQQHMRIHSGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRQQSGHREDTEEQAKNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01551132;
- 90% Identity
- iTF_01556968; iTF_01558433; iTF_01551132;
- 80% Identity
- -