Zlin012385.1
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- dmd-5
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000591.1:1973582-1975596[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-22 5.4e-19 68.0 9.3 1 47 13 59 13 59 0.98 2 2 0.17 6.7e+02 0.4 1.3 5 20 134 149 131 152 0.58
Sequence Information
- Coding Sequence
- ATGGCTGTGCCAAGTGCGTGCTCGATCTTCAATAAGCGGAGCCCAAAGTGTTCCCGATGTCGCAACCATGGAGTGATCAGCGACATAAAGAGCCACAAGTACCGCTGCCCATGGCGCCAATGCGTTTGCCCCAGGTGCATGTTAATTGTGCAGCGGCAGCGCGTGATTGCCGCACAGGTAGCCTTACACCGGCAACAGGTGCAGGACAGGCTCGCGATGCAACTGCTGACGGAGTGTCAGGCGAATCAGGAATTTGGTTACGGGAATGTCACGCCCATAACTGCTGACTCCTTAAGGAACAGGAACTTCGATTCCTTGCTGCATGATATAACAAAGTTTTGTAGTGACAACCGAAGTTCCACATCAAATCAGCCATGGGGAACCACTGTCCCAGCCTTTTGTGATCATTGCCGTGCTTGTGAAAGGAAGCGATCCTTGCAAATGCATTCTATGAGCTTAGCCACAAGTTATCCCATGGAGATTTATCCGGCTTCGGCATCCAAACTCGgaaatattttactaactGAAACCGATTTGGATGCGAATTCTGGCTTGGGATTATCCACTAGTTCCGCAGCTGGTATGTTCCAAAGGACTCCCAGTCTGCTTGCAGGCCAGAAACCATTCAATGAGAGGATCAGCTCAGCGGACAATGAGGTGACTCTGGAAGATCAAAGCTCCAAAGCGGAGAAAAACTCCTCAGTTTGGAATACAAAGCTGCGTTTGCTTAAAGGAGCATTCATGTCCTACAATCGAAGGGAGTGCATACAGACACCAAGCGGGAGCTACTTTTGCAGTCGTTACAATCCTTATCCGCAGGATTTGGGCAAGCGCATTCCTGCTGCCGATAACTTGGGAAAGGATAATGCTTCCAGGAAAGTCACCAAGAGCAGCGGACGCTTCTTCCGACCCTTCGAATAG
- Protein Sequence
- MAVPSACSIFNKRSPKCSRCRNHGVISDIKSHKYRCPWRQCVCPRCMLIVQRQRVIAAQVALHRQQVQDRLAMQLLTECQANQEFGYGNVTPITADSLRNRNFDSLLHDITKFCSDNRSSTSNQPWGTTVPAFCDHCRACERKRSLQMHSMSLATSYPMEIYPASASKLGNILLTETDLDANSGLGLSTSSAAGMFQRTPSLLAGQKPFNERISSADNEVTLEDQSSKAEKNSSVWNTKLRLLKGAFMSYNRRECIQTPSGSYFCSRYNPYPQDLGKRIPAADNLGKDNASRKVTKSSGRFFRPFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -