Basic Information

Insect: Zaprionus kolodkinae
Gene Symbol: -
Assembly: GCA_018901885.1
Location: JAEIFM010000498.1:3333914-3338530[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0022 0.15 12.4 2.6 1 23 216 238 216 238 0.98

2 26 0.017 1.2 9.6 5.3 1 23 244 266 244 266 0.98

3 26 0.1 7 7.2 0.4 2 23 298 319 297 319 0.96

4 26 0.01 0.68 10.4 1.3 1 23 393 416 393 416 0.93

5 26 1.6 1.1e+02 3.5 1.3 2 22 427 447 426 447 0.94

6 26 1.9 1.3e+02 3.2 0.9 1 19 456 474 456 476 0.93

7 26 0.036 2.4 8.7 1.9 1 23 491 513 491 513 0.98

8 26 0.00038 0.026 14.9 0.4 2 23 592 614 591 614 0.95

9 26 0.00072 0.049 14.0 0.1 1 22 622 643 622 643 0.96

10 26 0.079 5.4 7.6 2.5 1 23 652 675 652 675 0.97

11 26 0.008 0.54 10.7 0.2 2 23 705 726 704 726 0.97

12 26 1.1e-05 0.00074 19.7 2.5 1 23 734 756 734 756 0.98

13 26 0.028 1.9 9.0 1.6 1 23 910 933 910 933 0.94

14 26 0.0025 0.17 12.3 2.9 2 22 941 961 941 961 0.96

15 26 0.2 14 6.3 0.4 1 23 970 993 970 993 0.91

16 26 4.2e-05 0.0029 17.9 2.2 1 23 1019 1041 1019 1041 0.98

17 26 0.00041 0.028 14.8 0.7 1 23 1048 1070 1048 1070 0.98

18 26 0.017 1.2 9.6 0.1 2 21 1097 1116 1096 1117 0.94

19 26 0.074 5 7.6 5.2 1 23 1162 1185 1162 1185 0.96

20 26 0.0055 0.37 11.2 2.7 1 23 1222 1245 1222 1245 0.97

21 26 0.0011 0.073 13.4 3.9 1 23 1269 1292 1269 1292 0.97

22 26 1.1e-05 0.00072 19.7 0.1 2 23 1316 1337 1315 1337 0.95

23 26 0.00021 0.014 15.7 3.1 1 23 1343 1365 1343 1365 0.99

24 26 2.9e-06 0.00019 21.5 2.7 1 23 1371 1393 1371 1393 0.97

25 26 5.3e-08 3.6e-06 27.0 2.4 1 23 1399 1421 1399 1421 0.99

26 26 0.0007 0.047 14.0 0.4 1 22 1427 1448 1427 1451 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0022	0.15	12.4	2.6	1	23	216	238	216	238	0.98
2	26	0.017	1.2	9.6	5.3	1	23	244	266	244	266	0.98
3	26	0.1	7	7.2	0.4	2	23	298	319	297	319	0.96
4	26	0.01	0.68	10.4	1.3	1	23	393	416	393	416	0.93
5	26	1.6	1.1e+02	3.5	1.3	2	22	427	447	426	447	0.94
6	26	1.9	1.3e+02	3.2	0.9	1	19	456	474	456	476	0.93
7	26	0.036	2.4	8.7	1.9	1	23	491	513	491	513	0.98
8	26	0.00038	0.026	14.9	0.4	2	23	592	614	591	614	0.95
9	26	0.00072	0.049	14.0	0.1	1	22	622	643	622	643	0.96
10	26	0.079	5.4	7.6	2.5	1	23	652	675	652	675	0.97
11	26	0.008	0.54	10.7	0.2	2	23	705	726	704	726	0.97
12	26	1.1e-05	0.00074	19.7	2.5	1	23	734	756	734	756	0.98
13	26	0.028	1.9	9.0	1.6	1	23	910	933	910	933	0.94
14	26	0.0025	0.17	12.3	2.9	2	22	941	961	941	961	0.96
15	26	0.2	14	6.3	0.4	1	23	970	993	970	993	0.91
16	26	4.2e-05	0.0029	17.9	2.2	1	23	1019	1041	1019	1041	0.98
17	26	0.00041	0.028	14.8	0.7	1	23	1048	1070	1048	1070	0.98
18	26	0.017	1.2	9.6	0.1	2	21	1097	1116	1096	1117	0.94
19	26	0.074	5	7.6	5.2	1	23	1162	1185	1162	1185	0.96
20	26	0.0055	0.37	11.2	2.7	1	23	1222	1245	1222	1245	0.97
21	26	0.0011	0.073	13.4	3.9	1	23	1269	1292	1269	1292	0.97
22	26	1.1e-05	0.00072	19.7	0.1	2	23	1316	1337	1315	1337	0.95
23	26	0.00021	0.014	15.7	3.1	1	23	1343	1365	1343	1365	0.99
24	26	2.9e-06	0.00019	21.5	2.7	1	23	1371	1393	1371	1393	0.97
25	26	5.3e-08	3.6e-06	27.0	2.4	1	23	1399	1421	1399	1421	0.99
26	26	0.0007	0.047	14.0	0.4	1	22	1427	1448	1427	1451	0.91

Sequence Information

Coding Sequence: ATGTTGCCGACAGATATATGTCGCACTTGTGCACGCCAAGCTGACAATCTGCTGGAGCTTTCAACGTGCATTGAAAAATACATGAACAAAAGAATAAGCGATATGCTACACGAATTGACGCACAACGATCCAATGGAACTGGCAGCTGATGATCTGCCTCAGTATTTATGCGAAGACTGCTTGCACCAGCTTCAAAATGCCTATGGTTTTGTGTTGCAGGTACGTCAGGTGCACGAGCAATTGCTGCTTAAGCTGCGCAAGGAACTGCTGTCACCAAAATGCTTAGATGAGACACCTATTGAAATGGCAGTGCAGCCTATCAAGACTGAATCAGACATTGAATTTGGTGCGGAAACTGAAAATGCTGATCAAATGGACCCAGAGGACGATTGTGCAGTTAGTCCAATTGTTTGTATTGCAGCGTTAAAATTGCAACCAGAAAGTGACAGTGAGAGTAACCGCGATGATGCAGACCGTGAGGATCTCCAACCTATGCAACTGAGGCGAAGTGTGCGCCATGCCAAAGTTTCAAACAGCAGCGAAGATGAAGCAGAATCTGAAAGCACAAATCCAACAGTAATAAAACGTAGGCGTGGCCGTCCAGCTCGTGTCGCCAAGGATCAAACTACAAATGAAGAAGGGCGATTTACTTGCGAAGTCTGCAAGAAAACGTTCTCATGGCATCGCGACATGCAACGTCATGCCCGCATACACTACGAGAAGCCTTCACATGTGTGCGAACACTGTGGAAGGAGTTTCTTGCGTAAGGACAAGTACATATTTCATATGCGCACCCATGAGAAGCATCGTGCCAAATCCCATACTTCAACGCTGAACCTGGAGTGGCGATTTGCTGAGCGGCTGTATAGTTCAGGACTACCCAAAAGTATTGAATGTAAGCTGTGCGGCTTAAGGTGCCAACGCATTCTGGAGCTGCGTGAACATATTGCTAGCCATGCCAGACCTGAAACATTGTCCGATCTTAGTGCCGATAGCGATGTTATCAGAGAACATTTTCCCAACCATCAAGACATGACACAAGTCAGGCAACTGGTGTGTGCAGACATTGCTAAAGGGCGAGAATACTTGGATAAATACTGTTCAGTGATTAATACTCATGGCTATGAGCTCTGCCTGAGTGACTCCGACGAGGAAATTGATGGGATAACACCTCCTTATAAATGCTTACCCTGTAACGCATCTTTTACTCGCAAATATCGTTTGATGCGTCACACACTAGAGTCCCACACACAATCAAATAATGAAGCTGACTGGCAGCGTTGTAATAAATGCCAAATTGGCTTTGTATGTGTGAAGTTGTTAGAGCAGCATCAGCGTACCCAGTGTTACAGTGAATTCAGGCGCTATAGCTGTACAGAATGTCCAGGCAAATTTATATGGCAACAAAATCTCAAACTGCACAATTGCTGCGAGGGAAAGAGGATTGCAGCGGGTGAAGACCGTCGTCAGTTCTATTGTTGTTTGTGCGATGAGCAATTGGAAAGCATGTCTACTCTGAGAAGTCACTTACTCACTCATCGGGATGGAAGCACTGGCATAGATCAAAAACAATCTTCTACATATTTTCGTTACTTTTATCCCAATGGCCTGGATTGTAACTGGACGGAACTAAGTGGACGCATTGCTAATGATTTTGAAGTTGGGGATTATGGAAGATATTTTAATGCCTGTACAGCTGCTGGCCAGGAACTAGACTTCTTAGCTTCGGATACTGACTTAAGCGATAATGAAAGAACATCTTCAGTTGTGCTTACGTGTGATTTGTGTGGCGAGGCCACCACTCGCCTTACATATTTGCGTCGTCATCAAGAAAGTCAACATAGTGAGCTAAAGTCCATGCCTCATGTTTGTGCCACATGTGGAAGAGGGTTTGTTGCTAGATCATTGCTTCAGTGGCATCTACGAACAGTATGTTGCAAGCGACATGTAAATTATAAGTGTACGGACTGCAACCTTTACTTTGTATGGCAGTCGAACCACGAGCGGCATATGAAGTTAATGCACGAAAAGGTGATTGACAATGAGACAGCGGATGAGTTAAAACAGGTGCCCCGCCTGAGGACCAAACGTCAGCAGCCAATAGCCAAGCTGCAGTGCGGCGAATGCGAAAAGCTTTTCATCTGGCCAAAGGATCTAACCCGTCACAAACGGATTCATCAGTTACAAACGGCGGCACAGTATGATTGTTCCTTTTGCCAACGCAAGTTTTACCGAAAGGATGGGCTTAAGTCTCATATGCGGGTGCATGGGGAGCAACTGCAACTGGAAGCGACAAGTAAATCCATTAGTAATCCTGATACTGATGTATTGCAGAACATGCCTGTTGTTTTGTCCCAACTATGCCGTCCCAATGGTTGCAAGCAAATAAAATGCATGATTTGTACATCTTACCATACAAAGATCTCCGATCTGCGCACCCATATAACTACACATCGATTCGCGTTACCTCAACTAAAGCATGCAAATCCGGAAGAGATTGCAACCACCTGGCGTACACTATATCCGGAACTAGAATCTAATAATATGGACAGAGAACAATTAATTCAGCGCATACAATTTGATCTAGCTAAAGGTGATGAACTTGATAGATTCGTTTCGATTACAAACGAGGCGGGTATTGAGCTGTGCTTGGATAGTAGCGAAACCGAAACTGATTCGGACTCCACGGAAACTACTGAAAGAAACAGTAGAACAGCAAGCCGAACATACGACTGTGATCTGTGCCAACTTAAAGTGTCACGAAAACACAAACTTTATGCACACCAGCTGGAGCAGCATGCTTGGCAAGAAGCGAGCAATGTGTGCAGCCATTGCCAGGCAAGATTCGTTAATAAACACTTGCTGGAACATCATTATCGCACAATTTGCCGCAATGACCTCAAGCGATTCCTTTGCCGCAAGTGTCCTTTACGTTTTCGCTGGCGCAACAACCTCAAGTTACACGTGGATATTGCGCATCCGGAAGTCGTCACCGAGAAACAGCCGAATACAGGAATCCAATTGACTGGAACCAGTGCGCTGCCGGTTGGCAGCTATGAATGTCTCGAGTGTAAACGTAGCTTTAAAATGCAGAAGGATCTTACACGCCACAAGTTGATGCATGCGCAAGAATCGAGCATTTATCGTTGTCGCTGGTGTGCCAGGCGCTTTTATCGAGAGGCCAATCTTCTTCAGCACATTGAGCGCCATGGCATTAATGCTGCTCAACTGCCTTACGCGGAGACCCTGCTAAATGCCAGCCGGCATCCGAATGGATTAAAATGCATTCAGTGCAAGGTGTGCAATGTGCAATTTCCCACAATTGCCACACTACGCACACATTTGATGTCTGCCCCCAGCGGAACACACCACGATGCCGAGTCCATGCTTAACTACTCGATTACCAATCAGTTTGGCTATGAGCTTCATTTAGAAGACTCGGAAACGGATGACGAGGCGAAACCTGCCGGCACACCATCGCACTACACTTGCGGCATGTGTCAACTGCGTTGTAAGCGAAAATATGAAATGCATCAGCACCAGCAAGCGATGCATCGACTGGAAAGGATAAGCGATGGCTGTGATCAATGCATTTTCAAGAGTGTCTCAGCTGATCTGATTGCCTACCACAAACGAGTGCAATGCAGCAATGTTGAGAAACAATTCAAATGTTCAAAATGTGGATATAAATTTATGTGGGAATCAAATTTGTCACTGCACATGCATCGAGAGCATTCAAACGGCGATGTCCAGGCAAAGGCGGAGACTGTAGCGGGCTCAGTTGAGAGTACTACAAGCCAGACCTTTAAATGTGGTCAGTGCCCACGTAAATACAATCGAAAGGATCGTTTGACTGCCCATGTCAAGAAGTGTCATGCACCGAACGCGATTGCTTCAAAGAAAACAACGAAGACGACAAGCGTCGCCAAACAGCAGAAAAGTTTTCTATGTGCCTTTTGCGGAAAAGCCGTGAGCTCCTCCTCGAATCTAATTGTACACATACGACGTCACACTGGCGAAAAACCATTTAAGTGCGACTTTTGTGACATGGCTTTTCCACGCTCCTCGGATCTTCAGTGTCATCGACGCACCCACACAGGCGAACGGCCTCACGTTTGCACAGTTTGCCAAAGGGGATTCTCACGCTCGTACAAGCTGCAGCAACACATGCGCATCCATAACGGCGAACGACCCTACAAATGTACCTATTGTGACAAGAGCTTTACACAGTCCAATGACCTGACACTCCACATCCGTCGGCACACAGGAGAACGCCCCTATCAGTGCAGCACCTGCGGCGAACGGTTTATCCAGGGCACAGCCCTTAAGAACCATCGACAGCAGAGTGGACACAAAGACGATGCCGAGGATCAACCTAAAACAAACTAA
Protein Sequence: MLPTDICRTCARQADNLLELSTCIEKYMNKRISDMLHELTHNDPMELAADDLPQYLCEDCLHQLQNAYGFVLQVRQVHEQLLLKLRKELLSPKCLDETPIEMAVQPIKTESDIEFGAETENADQMDPEDDCAVSPIVCIAALKLQPESDSESNRDDADREDLQPMQLRRSVRHAKVSNSSEDEAESESTNPTVIKRRRGRPARVAKDQTTNEEGRFTCEVCKKTFSWHRDMQRHARIHYEKPSHVCEHCGRSFLRKDKYIFHMRTHEKHRAKSHTSTLNLEWRFAERLYSSGLPKSIECKLCGLRCQRILELREHIASHARPETLSDLSADSDVIREHFPNHQDMTQVRQLVCADIAKGREYLDKYCSVINTHGYELCLSDSDEEIDGITPPYKCLPCNASFTRKYRLMRHTLESHTQSNNEADWQRCNKCQIGFVCVKLLEQHQRTQCYSEFRRYSCTECPGKFIWQQNLKLHNCCEGKRIAAGEDRRQFYCCLCDEQLESMSTLRSHLLTHRDGSTGIDQKQSSTYFRYFYPNGLDCNWTELSGRIANDFEVGDYGRYFNACTAAGQELDFLASDTDLSDNERTSSVVLTCDLCGEATTRLTYLRRHQESQHSELKSMPHVCATCGRGFVARSLLQWHLRTVCCKRHVNYKCTDCNLYFVWQSNHERHMKLMHEKVIDNETADELKQVPRLRTKRQQPIAKLQCGECEKLFIWPKDLTRHKRIHQLQTAAQYDCSFCQRKFYRKDGLKSHMRVHGEQLQLEATSKSISNPDTDVLQNMPVVLSQLCRPNGCKQIKCMICTSYHTKISDLRTHITTHRFALPQLKHANPEEIATTWRTLYPELESNNMDREQLIQRIQFDLAKGDELDRFVSITNEAGIELCLDSSETETDSDSTETTERNSRTASRTYDCDLCQLKVSRKHKLYAHQLEQHAWQEASNVCSHCQARFVNKHLLEHHYRTICRNDLKRFLCRKCPLRFRWRNNLKLHVDIAHPEVVTEKQPNTGIQLTGTSALPVGSYECLECKRSFKMQKDLTRHKLMHAQESSIYRCRWCARRFYREANLLQHIERHGINAAQLPYAETLLNASRHPNGLKCIQCKVCNVQFPTIATLRTHLMSAPSGTHHDAESMLNYSITNQFGYELHLEDSETDDEAKPAGTPSHYTCGMCQLRCKRKYEMHQHQQAMHRLERISDGCDQCIFKSVSADLIAYHKRVQCSNVEKQFKCSKCGYKFMWESNLSLHMHREHSNGDVQAKAETVAGSVESTTSQTFKCGQCPRKYNRKDRLTAHVKKCHAPNAIASKKTTKTTSVAKQQKSFLCAFCGKAVSSSSNLIVHIRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCQRGFSRSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCSTCGERFIQGTALKNHRQQSGHKDDAEDQPKTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559168;
90% Identity: iTF_01559168;
80% Identity: -