Basic Information

Insect: Zaprionus indianus
Gene Symbol: -
Assembly: GCA_018904595.1
Location: JAEIHA010000320.1:7866331-7869549[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6.9e-07 4.9e-05 23.4 2.3 1 23 224 246 224 246 0.98

2 16 0.001 0.073 13.5 2.8 1 23 253 275 253 275 0.98

3 16 0.016 1.2 9.7 3.7 1 23 418 441 418 441 0.97

4 16 0.02 1.4 9.4 0.6 1 19 448 466 448 468 0.94

5 16 0.0084 0.6 10.6 4.7 1 23 478 500 478 500 0.95

6 16 3.6e-05 0.0025 18.0 0.4 1 23 507 530 507 530 0.97

7 16 8.2e-05 0.0058 16.9 1.1 2 23 538 559 537 559 0.96

8 16 0.0075 0.53 10.7 0.1 2 21 586 605 585 606 0.94

9 16 0.0081 0.57 10.6 1.9 1 23 662 685 662 685 0.96

10 16 0.0069 0.49 10.8 0.7 1 23 722 745 722 745 0.96

11 16 0.00086 0.061 13.7 0.8 2 23 792 814 791 814 0.95

12 16 0.017 1.2 9.6 0.1 1 23 828 850 828 850 0.95

13 16 1.2e-05 0.00089 19.5 1.2 1 23 856 878 856 878 0.99

14 16 3.2e-07 2.3e-05 24.5 2.6 1 23 884 906 884 906 0.98

15 16 1e-05 0.00074 19.7 3.8 1 23 912 934 912 934 0.97

16 16 0.0016 0.11 12.9 0.2 1 23 940 964 940 964 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6.9e-07	4.9e-05	23.4	2.3	1	23	224	246	224	246	0.98
2	16	0.001	0.073	13.5	2.8	1	23	253	275	253	275	0.98
3	16	0.016	1.2	9.7	3.7	1	23	418	441	418	441	0.97
4	16	0.02	1.4	9.4	0.6	1	19	448	466	448	468	0.94
5	16	0.0084	0.6	10.6	4.7	1	23	478	500	478	500	0.95
6	16	3.6e-05	0.0025	18.0	0.4	1	23	507	530	507	530	0.97
7	16	8.2e-05	0.0058	16.9	1.1	2	23	538	559	537	559	0.96
8	16	0.0075	0.53	10.7	0.1	2	21	586	605	585	606	0.94
9	16	0.0081	0.57	10.6	1.9	1	23	662	685	662	685	0.96
10	16	0.0069	0.49	10.8	0.7	1	23	722	745	722	745	0.96
11	16	0.00086	0.061	13.7	0.8	2	23	792	814	791	814	0.95
12	16	0.017	1.2	9.6	0.1	1	23	828	850	828	850	0.95
13	16	1.2e-05	0.00089	19.5	1.2	1	23	856	878	856	878	0.99
14	16	3.2e-07	2.3e-05	24.5	2.6	1	23	884	906	884	906	0.98
15	16	1e-05	0.00074	19.7	3.8	1	23	912	934	912	934	0.97
16	16	0.0016	0.11	12.9	0.2	1	23	940	964	940	964	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCTATCATTTGCCGCACCTGTGATGCGAAGGACACGGACAAATTGTATAAACTTGCAGCGGCCACCAAAAGGTTTCCGGATAAGCTACTTTCTGAGATTTTAACAGAATTGACGCATATCGAGGTGGACGAATCATTGAGCCGGCAGCTGCCACAATGTTTGTGCGGTGCCTGTGCAAGGAAACTTATTGGCGCGTATTACTTTGTGAAGCAAGCACTAGCTGCCAATGAGCTACTAATGAATCATGTCCAGGACAATGGGAAAGCAGCGGCTAACGATTGTCTGCAAGAGGCTCCCATGGAGCTATGTGCAGAGCAGCATGTGGAGGTTTGCATGGTCAAACTGGAAACAGAAGATGAGGACTTGGAAAACGATATAACATGCACAGAACTGCCAGAGTTTACGACAGTACAAAATGCCAATGATGTTGATACTGCTGCACTCTGTAGCATTGATAACAAGAAGTCCACTGACCCGTTGACAATGCTGGAGTCTGTGAAGAGGGAATTGGATGCGGATGGAGCAAGGGTGATTTGCGTCCAAGGGGAAGAGTATAAGGCTGACTTCGATGAGGATGATTCCCTTGATGATTTACCTCTGCAGCTGCGAGTCACCCAATGGAAACAGTCAGATAAGATGCGCGCGATAAGAAGACAGATTTTCAAGTGCCAGGAATGCCCAAAGAGTTTCAAGCGTCCTCGATATCTGAAACAGCACTCGCGTGTCCACAAACCTAAAGCCGATTGGTTCTCCTGTTCGTTCTGCATACGAAAGTTCAGTCACAGTGAAGCACTGCAGACGCATCTCAGGATCCACGGCGATTCGAAGCGTTCGGCCAACCTGAGCGACAGCAAGAAGGCCAAGGAAGTGGATGTGAACGTGTGTAAGCCACATGGCTACAAACTGATCGAGTGCATGATCTGTCAAAACCAATACGATAAGATTGCGCACTTGCGTTGCCATCTGAAGCATCATCCGGAAATTAACTTCGGCACTCGCTCCACGATGCCTACGAGTGAGTTGGCTGAACTCTTCTATCCCGATGCCAAGGATGTCAGTGAGGAGCAGTTGAAGATGCTCATACGCAAGGATTTGGCAGCAGGAATCTATCAACGTTTCTACTCTATAACGGATCAATCAGGCTACGAAATGGATCTGGACAGCTCGGAGACAGAGAGCGAAGTTGATTGCGAGGGCGATGGTGATCTGACGAGGCAAAATCGACGCATACCCAAGGCAAAATATAGCTGTGAGCTATGCCAGGTGCGCTGTCAGCGGAAGTATCAACTGTACGATCATCAGCGACTATCGCATGCCTGGCTGGATGCACCTCATGTCTGTGGGCGCTGTGATGCACGCTTTGTTAGCCAGCAACTCCTGCGGCATCACAACGAGCTGCAGTGCAAGAATGCCCAAAAACGTTTTCTGTGCCACAAGTGTCCGCTACGTTTCCGATGGCGGCATAACCTAAAGCTCCACATACGTGAGCACAGGATAACAAACCAAACATTCGAATGCGCGGACTGTAAGCGCGTCTTCGATAAGAAGAAATCGCTGACGGTGCATCTGCTGAGTGTGCATGCCGAGGAGTCCAAGCTGATACCGTGTCAATGGTGCAGTCGCAAGTTCTATCGACGCGACTATCTAGTGAAGCACCTAAAGCGACACGGCATTAGAGAGCCGGATATACCCCTGGCAGAGACACTCATAGCTGCCACATCCAAGCCGAATGGCGCCAAACGGATCACATGTAAAATATGCAATATGCAATTCGATCGCATCATCGATCTGCGCTCCCACATTCAGCTGGAACTGAAGCTATCATTGTCGCTCCACCAGAACTACGATTCGCCACACAATTATTCCATAACAAACGAGTCGGGCTACGAGTTGCAGCTTAACGACTCCGAGACGGAGGACGAAATGCAAATGCAACTGCATCCAACGGGAGGATCGACGGGAGCACGCTTTGTCTATGTCTGCGAGCTGTGCCGGGTGCAATGCAAGCGCAAGTACGAGATGATTCAACATCAGCGTGCCATGCATCAGTTCGACAAGATGCCTTACGAGTGTGAACTATGCATCTTCAAGTGTGTCTGCAAGAGTATTATGGATCAGCACAGGCAGTCGCAGTGCCACAGTGTGGACAAGAAGTATACGTGCAGTCGCTGCAGCTATAAGTTTATGTGGCCTGAGAATCTGGAGCAACATATGCAATTGCAGCATGCTGGGACTACGAGTGCATTGGCTGCGTCAAGTGAAGCAATAGCCAGCGGGAATCGGATACCTACGGATGCCAACGAAGCAGCAGCTGCGGCGGCATCGGCAGCTGTGCCAACAGCAGCTGAGGATGTGCAGCTCCTTCAGTGCCCACACTGTGATCGCACCTATCAGATTAAGGCGCGTCTCAACAATCATATACGAGACGTGCACATCAATGGGGATCGCAAGCGCAAGGAGGCGATCAAGAAGTTCCTATGCTCGCTGTGTGGCCTGGAAGCACAATCGGCGGCAACCCTTGTCACTCATATGCGTCGTCACACGGGCGAAAAGCCCTTCAAATGCGATCTCTGTGAAATGGCCTTCCCTCGGCACTCAGATTTGATATCCCATCGACGGATGCACACGGGAGAGAAGCCTTTCCATTGTACAGTCTGCGGCAAGGATTTCGCCCGATCCGACAAGCTGAAGCGGCACATGCTGACGCACAGTGGCCTGAAGCCGCACAAGTGCACGTACTGCGATAAGAGCTACCGCCAGGCCAAGGATCTGAAGCTGCACTTACAGCAGCACACCGGGGAGTGCCCATTCATATGCGGCACCTGCGGGGAACGTTTCATACAGGGCAAGGCACTGGAGAAGCATCGCATGATGCAACGCCACTTTGACGAAGTGGAGGAACGCACCACGACCACGTTGAGCGCATGA
Protein Sequence: MKLPIICRTCDAKDTDKLYKLAAATKRFPDKLLSEILTELTHIEVDESLSRQLPQCLCGACARKLIGAYYFVKQALAANELLMNHVQDNGKAAANDCLQEAPMELCAEQHVEVCMVKLETEDEDLENDITCTELPEFTTVQNANDVDTAALCSIDNKKSTDPLTMLESVKRELDADGARVICVQGEEYKADFDEDDSLDDLPLQLRVTQWKQSDKMRAIRRQIFKCQECPKSFKRPRYLKQHSRVHKPKADWFSCSFCIRKFSHSEALQTHLRIHGDSKRSANLSDSKKAKEVDVNVCKPHGYKLIECMICQNQYDKIAHLRCHLKHHPEINFGTRSTMPTSELAELFYPDAKDVSEEQLKMLIRKDLAAGIYQRFYSITDQSGYEMDLDSSETESEVDCEGDGDLTRQNRRIPKAKYSCELCQVRCQRKYQLYDHQRLSHAWLDAPHVCGRCDARFVSQQLLRHHNELQCKNAQKRFLCHKCPLRFRWRHNLKLHIREHRITNQTFECADCKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRRDYLVKHLKRHGIREPDIPLAETLIAATSKPNGAKRITCKICNMQFDRIIDLRSHIQLELKLSLSLHQNYDSPHNYSITNESGYELQLNDSETEDEMQMQLHPTGGSTGARFVYVCELCRVQCKRKYEMIQHQRAMHQFDKMPYECELCIFKCVCKSIMDQHRQSQCHSVDKKYTCSRCSYKFMWPENLEQHMQLQHAGTTSALAASSEAIASGNRIPTDANEAAAAAASAAVPTAAEDVQLLQCPHCDRTYQIKARLNNHIRDVHINGDRKRKEAIKKFLCSLCGLEAQSAATLVTHMRRHTGEKPFKCDLCEMAFPRHSDLISHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCDKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGKALEKHRMMQRHFDEVEERTTTTLSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: iTF_01553381;
80% Identity: -