Zind012516.1
Basic Information
- Insect
- Zaprionus indianus
- Gene Symbol
- Ssb-c31a_1
- Assembly
- GCA_018904595.1
- Location
- JAEIHA010000905.1:9211815-9212230[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-25 1.9e-21 75.1 1.1 1 51 52 102 52 103 0.96
Sequence Information
- Coding Sequence
- ATGCCGAAAATAAGTAAAAGTAAGAAAAAGGAAAGCTCGTCTGACAGCGATAGCGGTCCCGATGATCGCAATCAGCCGCCGCCAAACAAGAAAGCCAAAGAGACCGGCAAAACAAATCAAGCAGCCGGCGGCGGCGATGAAGGAGCGACAACATGGACGCTAGAGGGTTTGCGTCAGGTGCGCATCAATGAATTTCGTGGCAAGAGATCGGTGGACATACGCGAGTTTTATGAGAAGGATGGCAAAGTCTTGCCGGGCAAGAAGGGAATCTCACTCAATGGTAAACAATGGCGTAAACTACTCGAATTGGCCGACGAGATTACTCAAGCTTTGAATGACTGA
- Protein Sequence
- MPKISKSKKKESSSDSDSGPDDRNQPPPNKKAKETGKTNQAAGGGDEGATTWTLEGLRQVRINEFRGKRSVDIREFYEKDGKVLPGKKGISLNGKQWRKLLELADEITQALND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01552459; iTF_01548858; iTF_01556838; iTF_01556839; iTF_01556840; iTF_01556841; iTF_01558300; iTF_01550281; iTF_01556837; iTF_01559763; iTF_01555414; iTF_01551735; iTF_01551002; iTF_01558299; iTF_01557565; iTF_01556842; iTF_01553234; iTF_01559037; iTF_01554702;
- 90% Identity
- iTF_01550281; iTF_01556837; iTF_01552459; iTF_01559763; iTF_01555414; iTF_01551735; iTF_01548858; iTF_01551002; iTF_01558299; iTF_01557565; iTF_01556838; iTF_01556839; iTF_01556840; iTF_01556841; iTF_01558300;
- 80% Identity
- -