Zghe000364.1
Basic Information
- Insect
- Zaprionus ghesquierei
- Gene Symbol
- stc_1
- Assembly
- GCA_018904095.1
- Location
- JAEIGP010000806.1:3024736-3028029[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.3 1.1e+04 -3.5 0.5 15 18 303 306 302 307 0.79 2 15 1.9 1.5e+04 -4.0 1.6 15 19 330 334 329 334 0.81 3 15 0.052 4.2e+02 0.9 2.0 4 11 363 370 362 371 0.90 4 15 5.4e-07 0.0043 16.9 15.1 1 19 375 392 375 392 0.93 5 15 1.5e-08 0.00012 21.9 11.9 1 18 428 445 428 446 0.98 6 15 1.6 1.3e+04 -3.8 1.5 7 13 450 456 450 457 0.75 7 15 1.9e-09 1.5e-05 24.8 12.9 1 19 486 504 486 504 0.98 8 15 0.37 3e+03 -1.8 0.9 5 10 534 539 534 539 0.95 9 15 2.2e-05 0.18 11.7 17.0 4 19 552 567 545 567 0.88 10 15 0.054 4.3e+02 0.9 11.6 1 11 607 617 607 629 0.79 11 15 2.6e-10 2.1e-06 27.5 15.1 1 18 634 651 634 652 0.97 12 15 1.6 1.3e+04 -3.8 0.9 6 10 681 685 681 686 0.81 13 15 2 1.6e+04 -6.0 9.2 10 18 699 708 688 709 0.78 14 15 2.4e-07 0.0019 18.0 15.4 1 16 745 760 745 770 0.89 15 15 1.7e-07 0.0014 18.5 12.9 1 19 777 796 777 796 0.97
Sequence Information
- Coding Sequence
- ATGCCAAATAGTAGTTCCTCCAGCAACAATTTCGGTGGATTCTATTCGCCACAATCCTTTGGCTATCAAAACGGCGATGAGCAAGGAGCAGGCAGCAGTAATTACGCCGGGTCCAGCACCTATTCCAATCTGTACTCACCCTTTGGCAATAATCCGTTTGCCACTGCCACCACGGGCTTTGACTTTAGCACTTCCAAGCTGCAGGCAACTGCACCCGAGTTTGTGCCCAATTTTGCCAAACTCAATCTATCGACGGCGCCGGAGTCAGAGACGCAGTCGAACAAAAGCAAGAACAATAATAGCAACACTGCCAGCAGTCAGCCAATCACGGAAGCAGCCAATGGGGTAGCTGTCAATCCTCACAATCATCAACAGTCACATCAAAGAGGCGGCACAACGCCAACCACCGAGCAGAGGCAACAATCGAAGCCACAGGGAAGCAACAGTCGCCAGCAGCGACGTAACGACTATCGTGAGGATCGCATAGAAAGAAACGAGGAGCGGGAACGAGATCGTGATAGAGATCGTGATAGAGATCGTGATAGGGATCGTGATAGAGATCGTGATAGGGATCGTGACCGGGATCGCTATGATCGCAAGAAGCCACAGAAGCAACAACGCTACGACAATCACCGCAGCAATAAACGACGCGACGACTGGAATCGCAATCGGGATCGTATAAATGGCTATCCACGCGCTGCCGAGGAGCTGGACACGAGCAACAGCAACGATAGCGCGCAACCATCGCCGGAGAAGCAACAACAACAGCAGCAAATCTCGCCAAGACGTGCACCGGACAATGAGAAGCTCTCGCAGCGAGAGAAATTAATGCGCGACATTGAGCAGCGTCGGCTGGAGTGTCTCGTCTGCGTAGAGCAGATCAAGGCGCATCATGGTACATGGTCGTGCCAGAATTGTTACCATGTGCTGCATCTTAAGTGCACCATCACGTGGGCCAGCAGCTCCAAGTCAGCCGAGGGCTGGCGTTGTCCCGCCTGCCAAAATGTGCTGCAGGAGCTGCCACGCGAGTATCTCTGCTTCTGTGGCAAGCTCAAGAATCCTCCACTAACGCGCAACGAGCTGGCGCATAGCTGCGGCGAACTCTGCTGTCGCGTCGAGAACTGCAGCCATGCCTGCACGTTGCTCTGTCATCCAGGACCCTGTCCCCCCTGTCAGGCTAATGTGAGTCGCAGTTGTGGCTGTGGACGCACCAGCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGTGATGCCATCTGCGATAAGCCGCTCAACTGCAGCGAGCATCGTTGCCAGCAGATCTGCCATGCGGGCAAGTGTGAGCCGTGCGCGGAGCAAGTGCAGCAGAATTGCCACTGCGGCAAGCAACAGCGCGAGGTGCTGTGCACGCGAGAGAGCCAGGATAAGCGCAACTATTCGTGCAAGGAGTGCTGTGGCAAGCCGCTGCCATGTGGCAATCACAAGTGCAAGGATTCATGTCATGCCGGCGCATGTCGGCCATGCAAATTGAGTCCCGCCCAGATTACAAGCTGTCCGTGCGGCAAATTGCCTGTGCCGCTGGAGCAGCGCAGCAGTTGTCTCGATCCGGTGCCCACGTGTGAAAGTATCTGCAGCAAGACGTTACGTTGCGGCAAGCCAGCGCATCCGCATCAGTGCGCCAGCAAGTGTCACCTGGGCCAGTGTCCGCCGTGTCCCAAGCAGACGGCAGTCAAGTGTCGTTGTGGCCACATGGATCAGATGATCAAGTGCCGGCAGTTGTCCACACGTGCAGACGATGCACGCTGCAAGCGACGCTGCACAAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGCGGAATGCTGCATCGACATCGATCACGCCTGTCCATTGCCCTGCAATCGCACCCTCAGCTGTGGACGTCACAAATGCGATCAGCCCTGTCATCGCGGCAATTGCCCGCCCTGTTATCGCAGCAGCTTTGAGGAACTGTACTGCGAATGCGGTGCGGAGGTCATCTATCCACCTGTGCCCTGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGCTCCCGCACCCATGGCTGTGAGCATGTGCCGCAGCATAATTGTCATGCGGCCGCGAGTTGCCCGCCCTGCATGATGTTCACCACGAAATGGTGCCATGGCCAGCACGAGCAGCGCAAGACGATACCCTGCTCCCAGGCCAGCTTCAGTTGTGGCCTTGCGTGCGGTAAGCCGCTCGCCTGTGGACGTCACAAGTGCATCAAGCCCTGCCATGAGGGCGAATGTCAGCAGGCCGGAGAGCAGTGCCGTCAGAGCTGTACCAAGGCACGTGTGCTGTGCGGTCACAAGTGTGCAGCAGCCTGTCACGAAGGCGACTGCCCGGATACGCCGTGCAAGGAGCTTGTCGAGGTGCAGTGCGAATGCGGCAATCGCAAGCAGAATCGCAGCTGTCAGGAGCTGGCCAGGGAGCATAGTCGGATTGCCACTGCGCAATTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAATTACATGGAGCTCAGCGAGATACTGGCGCCCTCCAAGACGAGCAAATCAAACAAGACCCTGGACTGCAATGAGGAGTGTCGCCTGCTGGAGCGCAATCGTCGCCTGGCCATTGGCCTGCAGTCGCGCAACCCGGAGGCGCAACTGAAATCACTCACCAAGTACTCGGAGTTCACGCGTGGCTTTGCCAAGCGTAATCCGGCGCTGACAAAGAGTGTCTACGAGACGCTCAGCGATTTGGTCAAGCTGGCCAAGGAGAGCAAGCAGAAGTCGCGCAGTCATTCGTTTCCCACCATGAATCGCGAGAAGCGTCAGCTGGTCCATGAGCTGTGCGAGGTCTTTGGCATTGAGTCTGTCTCGTATGACAAGGAACCCAATCGCAACGTGGTCGCCACGGCGCACAAGGAGCGCCGACGCGTGCCTGTGCCCAGCAACAATGCGTGGAGCACCCTCAAGAAATAG
- Protein Sequence
- MPNSSSSSNNFGGFYSPQSFGYQNGDEQGAGSSNYAGSSTYSNLYSPFGNNPFATATTGFDFSTSKLQATAPEFVPNFAKLNLSTAPESETQSNKSKNNNSNTASSQPITEAANGVAVNPHNHQQSHQRGGTTPTTEQRQQSKPQGSNSRQQRRNDYREDRIERNEERERDRDRDRDRDRDRDRDRDRDRDRDRDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAAEELDTSNSNDSAQPSPEKQQQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRNELAHSCGELCCRVENCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCDAICDKPLNCSEHRCQQICHAGKCEPCAEQVQQNCHCGKQQREVLCTRESQDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKLPVPLEQRSSCLDPVPTCESICSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHVPQHNCHAAASCPPCMMFTTKWCHGQHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKPCHEGECQQAGEQCRQSCTKARVLCGHKCAAACHEGDCPDTPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPSKTSKSNKTLDCNEECRLLERNRRLAIGLQSRNPEAQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHKERRRVPVPSNNAWSTLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- iTF_01551402;
- 80% Identity
- -