Basic Information

Insect: Zaprionus gabonicus
Gene Symbol: -
Assembly: GCA_018903695.1
Location: JAEIFO010001222.1:3812432-3815592[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00019 0.014 15.7 2.5 3 23 173 194 172 194 0.96

2 16 0.0011 0.079 13.3 3.1 1 23 242 265 242 265 0.96

3 16 0.00055 0.039 14.3 3.3 1 23 332 355 332 355 0.96

4 16 0.0058 0.41 11.1 0.4 2 23 407 428 406 428 0.96

5 16 5.6 3.9e+02 1.7 1.5 1 19 541 559 541 562 0.72

6 16 0.023 1.6 9.2 0.6 1 23 571 593 571 593 0.93

7 16 0.00025 0.018 15.4 2.1 1 23 600 622 600 623 0.95

8 16 0.00036 0.026 14.8 1.1 2 23 631 652 630 652 0.96

9 16 0.00086 0.061 13.7 0.1 3 23 680 700 679 700 0.98

10 16 0.0011 0.08 13.3 1.3 1 23 739 762 739 762 0.96

11 16 4.9 3.4e+02 1.9 1.6 1 21 769 789 769 790 0.93

12 16 0.00077 0.054 13.8 0.9 1 23 799 822 799 822 0.97

13 16 1.4e-05 0.00099 19.3 0.5 1 23 841 864 841 864 0.97

14 16 0.085 6 7.4 0.2 1 23 874 896 874 896 0.94

15 16 2.1e-05 0.0015 18.7 3.3 1 23 902 924 902 924 0.99

16 16 4.5e-05 0.0032 17.7 0.9 1 23 930 952 930 952 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00019	0.014	15.7	2.5	3	23	173	194	172	194	0.96
2	16	0.0011	0.079	13.3	3.1	1	23	242	265	242	265	0.96
3	16	0.00055	0.039	14.3	3.3	1	23	332	355	332	355	0.96
4	16	0.0058	0.41	11.1	0.4	2	23	407	428	406	428	0.96
5	16	5.6	3.9e+02	1.7	1.5	1	19	541	559	541	562	0.72
6	16	0.023	1.6	9.2	0.6	1	23	571	593	571	593	0.93
7	16	0.00025	0.018	15.4	2.1	1	23	600	622	600	623	0.95
8	16	0.00036	0.026	14.8	1.1	2	23	631	652	630	652	0.96
9	16	0.00086	0.061	13.7	0.1	3	23	680	700	679	700	0.98
10	16	0.0011	0.08	13.3	1.3	1	23	739	762	739	762	0.96
11	16	4.9	3.4e+02	1.9	1.6	1	21	769	789	769	790	0.93
12	16	0.00077	0.054	13.8	0.9	1	23	799	822	799	822	0.97
13	16	1.4e-05	0.00099	19.3	0.5	1	23	841	864	841	864	0.97
14	16	0.085	6	7.4	0.2	1	23	874	896	874	896	0.94
15	16	2.1e-05	0.0015	18.7	3.3	1	23	902	924	902	924	0.99
16	16	4.5e-05	0.0032	17.7	0.9	1	23	930	952	930	952	0.98

Sequence Information

Coding Sequence: ATGACAAGAACATGTAGGATCTGTGGAGGTGCTGATGGGCGCTATTGGATCGAGACTCCTGTAGATAAATACTCCGAGAAAACATTCAATCAAATATTACTAGAGCTAACCAGACTTGAAGTCGTCTTGGATCAAGCTGACAAGCTACCGCCCTGGCTATGTCGTAGCTGTGCTCACCGGTTGGAGAATGCCTATGATTTTGTCTTGCAAGCCCGTCAAACCCATCAGCTCTGGCTTCAAAAGCTTTTAACCGAAAATGATGCAGAGGACATCGAGCCTGGCACATTGGAGTGCCTGCGTGAGATGCCAATACAACTGCTGGAAATCGAGGGTATCACAATTAAAATGGAGCAGCCTGAACCAACACAACCGCCAGTAGACCCAACTACATCAATTGATCCTCTAGTTAAAAAGATAAGGGATAATGAGAGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTAGCAAGTGCGACAAGGCCTTCAAATACGTTACAAATTTGTTCAGGCACAAGCAGCGCGATCACAGAAACGACGAATCACCGTCTAAGAAAACTCCCGTCAGTCCAACCGATCATTCAAAGCCTTTACTTCAAAGTATTATAAAGAGTTCAGCAGCCAGCGGCAGCACACAGTCTGATTTGGACAGCAGCAACAGTGATAACTACTACAAATGCGATCAGTGCGATAAGTCGTATAAGTACATAATGCTGCTAATTAAGCACAAGCACAAGGCGCACGGCGCCAACCAGTTGCCTGCGGAGCCAAGACCAATCCGAAGAAATGATGAGTCGGGCTTGCAGCCAACGGGTAAGCCAAAAGCAGCAGCACCACCTCGCTCCAGGTCCACCTGTACAGATTCTTTAGTGCACAGCATTATCAAAGAGATCAAAATACCTGAGGAGGACGAGGTGGACACCACAGGAGCAGACAATTATTATAAGTGTGATCAATGTGATAAATCCTACAAGTACATCGTGAGTCTAATCAAGCATAAGCACAAGGAACACAATGCCTACAGAGATTCCGATGAGGAAGAAGACGACGCCGCGTTGTCCACTTATGCAACGTCTGTGGGTGGCCATTCAAAACCTTCACGCATCGATAGACGTGTCAAAAACTTTGATTTACATCGCTGCAAACCGAATGGATCTAAAGAGATTCAATGCATGATCTGCCTTCGTAGATTTGTCAAGCTAAGGGAGCTGCGAGAGCATCTTAAGGCACACCCACACGACTTCACATTCGATGCACATGGCGAGCCAATTGAACGTATTGCCGAAGGTTTCTATAAAACAGCCGTGGAGTCAACGGCCGAGGGCCTAAAACAGCGGATATTCAATGATCTCAAGATCGGCATGTACGGACGATACTATTCAATAACGAACGAAGCACGGTACGAAATGAATTTGGACAGCTCCGATACGGATACCGATGGCGACGGAGATGTTGTACAACGTCGTAGTTATGCCTGCGAACTGTGCGATTCACCCACTGCCGTATGGCCTCGTAAATTTCAGCTACACGAACATCATCGTCAACAGCACTCTTGGTTAGAAGCACCGTATGTTTGCCAGCGGTGCGACTCTCGGTTCCTAAGTGCCCAGTTGCTGGATCACCATACGCACAAGCTCTGTCAGAACACACTCAAGCGGTTCATGTGCGACAAGTGTCCACAGCGTTTCTTCTGGCGGCGTAATCTACGTGCACATCTCGTTGATCATAAGAACAAGCAAGATACATATCCATGTGATCAGTGCTCGCGCAGTTTTCAGGACAAGAGTGCCGTCACAAAGCACAAGCTGATGCATCACGATGTCAGCAATGAACTCATTCCCTGCCGCTGGTGCACACGAACGTTCTATCGCCCTGCACTGCTGCACAAGCATGTACAGCGACACGGTTTCAAGGGAGAAGACCTACCCCTAGCGGAGACTCTGCTGGCAGATGCCGCCAAGCCAACCGGACCGAAGAACATCCTTTGCAAGTTATGTGATATGCAATTCATTAGCATTGCCGATCTGCGACGACACATTTCAGTGCATGCGCACGGCGTGGAGGCAAGCAACTATATGATAAGCACGGAAGAAGGCTTTGAGCTGGACTTGGATGAAACAGATGACAGCGATGATGAAACTGTAACATCTAACGGCAGGTCTTATAAGTGCGATTTGTGTGATATGTCCTTTCAGCGGAGACGCGACATGAGCGAGCATCAATATTCCCTGCACACGTTCGACAAGTTGCCGTACTCCTGCGAGCATTGCATTTTCAAGTCCGTAGACAAGTTAATGCTCGAGCATCATAGGCGCTCACAGTGCCTCAATGAAGAGAAGAAATTCAAGTGTTCACGTTGCGGTTACAAATTTATGTGGCGCGTCAATCTTGAACGACACATGGCTAGTCAACACTCGAAATCATCCAATTTGGCTCCAGTGGCCTCCAAGAGAAGCAGACGTTTTCGATACCAGTGCCCGCATTGCTGGCGATCCTTTGTGGTGCAACCCAGCCTGGACAAGCACATACGAGACATGCATGTTGCCAAAAAGAATCCGGGCAAGAAGTATCTCTGTTCGCTGTGCGGCCTGGAGTCGCTGACGCCCAACAAACTAAGCATTCACATGCGTCGTCACAACGGCGAAAAACCATTCAAATGCGATCTGTGCGACATGTCCTTTACTGTGCACTACGAGCTGAAGGTTCATCGTCGCAAGCACACCGGGGAACGTCCTTATCAGTGTACGTTCTGTGCCAAGGATTTCGCACGGCCCGACAAACTGAGGCGACATGTCTATATGCATAGCGTTAAGCGATAA
Protein Sequence: MTRTCRICGGADGRYWIETPVDKYSEKTFNQILLELTRLEVVLDQADKLPPWLCRSCAHRLENAYDFVLQARQTHQLWLQKLLTENDAEDIEPGTLECLREMPIQLLEIEGITIKMEQPEPTQPPVDPTTSIDPLVKKIRDNESGXXXXXXXXXXXXXXXXXXXXXXXXXXXCSKCDKAFKYVTNLFRHKQRDHRNDESPSKKTPVSPTDHSKPLLQSIIKSSAASGSTQSDLDSSNSDNYYKCDQCDKSYKYIMLLIKHKHKAHGANQLPAEPRPIRRNDESGLQPTGKPKAAAPPRSRSTCTDSLVHSIIKEIKIPEEDEVDTTGADNYYKCDQCDKSYKYIVSLIKHKHKEHNAYRDSDEEEDDAALSTYATSVGGHSKPSRIDRRVKNFDLHRCKPNGSKEIQCMICLRRFVKLRELREHLKAHPHDFTFDAHGEPIERIAEGFYKTAVESTAEGLKQRIFNDLKIGMYGRYYSITNEARYEMNLDSSDTDTDGDGDVVQRRSYACELCDSPTAVWPRKFQLHEHHRQQHSWLEAPYVCQRCDSRFLSAQLLDHHTHKLCQNTLKRFMCDKCPQRFFWRRNLRAHLVDHKNKQDTYPCDQCSRSFQDKSAVTKHKLMHHDVSNELIPCRWCTRTFYRPALLHKHVQRHGFKGEDLPLAETLLADAAKPTGPKNILCKLCDMQFISIADLRRHISVHAHGVEASNYMISTEEGFELDLDETDDSDDETVTSNGRSYKCDLCDMSFQRRRDMSEHQYSLHTFDKLPYSCEHCIFKSVDKLMLEHHRRSQCLNEEKKFKCSRCGYKFMWRVNLERHMASQHSKSSNLAPVASKRSRRFRYQCPHCWRSFVVQPSLDKHIRDMHVAKKNPGKKYLCSLCGLESLTPNKLSIHMRRHNGEKPFKCDLCDMSFTVHYELKVHRRKHTGERPYQCTFCAKDFARPDKLRRHVYMHSVKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01553397;
90% Identity: iTF_01550434;
80% Identity: -