Zcap003755.1
Basic Information
- Insect
- Zaprionus capensis
- Gene Symbol
- hang
- Assembly
- GCA_018903675.1
- Location
- JAEIFN010001075.1:3112851-3121932[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.2 14 6.3 1.0 3 23 221 242 220 242 0.93 2 16 0.14 10 6.7 3.5 3 22 349 368 347 368 0.89 3 16 0.00043 0.03 14.6 3.3 1 22 461 482 461 484 0.90 4 16 0.049 3.5 8.2 0.1 2 21 496 515 495 516 0.93 5 16 0.00049 0.035 14.4 0.2 2 23 651 673 650 673 0.95 6 16 0.0014 0.1 13.0 0.1 1 23 681 704 681 704 0.96 7 16 1.1e-05 0.00082 19.6 0.1 2 23 790 811 789 811 0.97 8 16 0.0002 0.014 15.7 2.9 2 23 935 957 934 957 0.97 9 16 0.016 1.1 9.7 0.2 2 23 966 988 965 988 0.95 10 16 0.0015 0.11 12.9 0.1 1 23 1001 1024 1001 1024 0.97 11 16 8.9e-05 0.0063 16.8 1.1 1 23 1071 1093 1071 1093 0.99 12 16 0.0014 0.098 13.0 0.9 1 23 1101 1124 1101 1124 0.96 13 16 0.048 3.4 8.2 0.4 2 19 1132 1149 1132 1150 0.94 14 16 5e-05 0.0035 17.6 0.4 3 23 1261 1281 1260 1281 0.98 15 16 0.0036 0.25 11.7 0.1 1 23 1316 1338 1316 1338 0.97 16 16 0.0045 0.32 11.4 0.3 3 23 1403 1423 1403 1423 0.98
Sequence Information
- Coding Sequence
- ATGTGGGGCGGTCTCCAAATGCCGATGACTTATGCCTGCTGCTGCTGCTGGCCCAAGGCATGTTTTAACCAGAATCCGAATCCAAATCCGATTTCGAATTTGAATTCGAATTTGAATCTAAATCAGAATCAAAGTCTGCGATGTAGCAACGTTATGCCGACGCCCCCGCACCCGCTGGGGCAGCTATCACAAACTGCTGTTGCAACAATGACTAGCAACGTCGGGGCCACCGCCTGTGCTGCCGCTGGCAATGCCTCATCCTCTGCTTCTGGGTCTGCGTCTGCGTCTGCTTGTGCCGCCTCTGTCTCTGCTGCAGTCACGACTCCGTTGCTCATGCCGGTGACGCTGCAGAGCGCCGCCCAGCAGCTGCGCTTTTTCAGGCGCTATTCCTATAATCCGCTGCCCGCAGTGCCCATCAAGGATGAACCCTTGGACGACACAGACGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAGGGCGATGTGCCAATAATGACCTCCGAATATGATTATGCGACGCAGCATGGTGTAACGGCAGTTGCGGCAGCCGCAACGCTACCCCCCACCGCTGTCGCAAATGTGGCAGCCGCTGGTGATTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGACGCCACGAACGCAATTTGCATCCGAATCTATTTCAACTGTCGACTGATTCGCCAAATAACACGCCGATAACAAAGCCAACGCCAGCACTGGCTGCCGCACTGGAGATACAGCGTGCTGCCGCAGCGGCGGCTGCCACAGCGGAGGCAACCAAAGCCGCAGCCGGTGGCAATATATCGACACAAAAGTATCGCCAGGTGGTCATGAATACGTTCATCAAGTGTGAGAACGGAGGCTACGACTACGACAATCCGGAGCAATATCAGCAGCTGTTGACGCGCGACAAGGTCGAGTTCATACAGGACAACAGCGAGTTCCTCGAACAATACCAGACAATGACCTGCCGCTGCTGCAACAAGTTCTTCAGCACGTACAAGAACTTCATGGCGCATGTGAGGAAGAAGTATCCTCTGCTGCCGCGCAACCTATGCTTTAATTGCCTCAAGATGAACGACTCCAAGGCGTTGTTCATCTCTCATCTGAAGAAGCGCAACTGCATCAACTTGTACCGTGTACTAAATGCTCTGCGTGCCAAACACCCCAGTTTTGCTCATGCCACGGCAGCAGGAGGAGGAGGGTCAGCAGATCAGCAGCATCTGCAGCTAACGTCGGCACATGATACGTCTGCGGATCGGCCAGAGAAGTTGCGCGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGCCCCAAGGGATTTCGCACCAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCGGTCGATCGTCGACGGCATTATAACAACATGGACTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCCAAGCTGGAGACGCATCAACGTTTCCTCGATCATGTCTATCAGGATCACTTGGGTGGTGTCAGCAGCGACAACGCGTCGACGGGCAACAGTGGCTTGGATCATTCGCCTGGCAAGCGGAGTCTGCTGGGTGCTCTGGGCATTGGGATCAGTCAATCGTCCAACGAGGAGTCGCGCAGCAGCAGCAACAATAACAATAATAACGCTGGGGCTGGCGGGGCACCGTTAACCTCAACGCCCAAGCCAAGTGGCGGCGCAGGAGCAGCGGCGGCAGCTGCAGCAGCAGCCACCTCGGCTGGCTCCACGAGTGGCGGCGGCAGTCGGGATGCTCCGAAGTCGCAGTACTTTTCGCGCATGCCACAAGTGTGTCCGATCTGTGGACAGCAGTACAACAACTACAACAATGTGCTGCGCCACATGGAGTCAAAGCATCCCAATAAGTTGCCCGAGACATACAAGTGCGTGCGCTGTGGACTGGGCTATCCGCGCATCTCGTACCTGCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCGGGCGGCTTCGAGTACATTGTGAATGCGGATGCAGTTAAGTTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGCTATGACTATGTCATGAAGGATCTGATGTCCATAACAAATGGTGGGACACTCGATGACGACGACGAGGAGACCGGCAGCATAGCCAAGAAGATGCGTCTCGACGACAGCAGCAACAACAGCAGCATCAACACGAGCATTGCCAACCAGCAGAAGGAGTGCCCCATCTGCAACGCAGTGTTCAGCAACAACATTGGACTCTCCAATCACATGCGCTCCCACTACACCGCCTCGACAGCGACCAATGCAGCGTTGGCGGCTGCAAATCGCATGACGCCCAAGTCGCTGACAATTACAGCAACGCCGCCACTGCTGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCGCCAGCGATGGCCCATCAGACGCCACAGGAGCAAGCGGTATTTCGACGTAGCTTGGATCAGGCTGCCGACCGTCGCTTCCGACGCATGCGTTGCCGCATCTGTCAGCGTCGGTTCAGCTCGAAGAAGTCCTATCGCTACCACATGCTCACCGACCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAATGCGGAGTTCGCGTACGAGAAGGGACTGAAGGTGCATCTGTTCAAGGTGCACGGGCGTGCCATTAAGGATGAGATGATTGTCAAGCAGTTCGAGTGTGATGTCTGCTCCATTGTCTACAGCTCGGAACTGGAGCTGCAGCAGCACAAGCGCAGTGTACACAAATCCCAATTGGGCAGCAATTCAATGAAATCTACTGCTGCAACGGCAACAGCCACCACAACTACTGCCTCGGCTGATCTCGCTGAGACATCAACAATGTCAGGGCCGGGAGTGGGGGCCAATCTGCCACTGTATTGGTATCAGTGCAAGTACTGTCCATCTAACTTCAATACCAACAAGAAGCTGGCGATCCACATCAATTCGCACGATGAGTTCGACTCGAACGATTATTCGTGCAAGGATTGCGGCAATGTCTACAGCGGTCGCAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCTGATCCCGCCGAGTGCACGCTGTGCCGTAAGATGTTCTTCGACCGACAGATGCTGGAGAATCACACGCCAACCTGCAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACGATGATGACGACGATGAGGATGATGATCAGCTGCTACTGCTGGACGACGGAGCAGGAGTGGGAGGAGGAGCTGGTGCTGGCGAGGGAGTCGATAGCAATGGCGGTGGCAACAACACTGTTGTTGCTGTTGGCAAAGCTGGCAAGACTGGGGGCACAAACAGCCACGGCAGCAGCAGCACAGGCACACTGAAGATACGCATACCCGAAGTGGCATGCACCATTTGTGGGGCACGCTTCACGGACCAGGAGATGTTTAGCAAGCATATACAGCGACACGAACAGGAGCTATATGTGGATAATCCGTTGGCAGCGATGTTCGACGATGGTCCCGCCGATGCTGGACAGTTTCAGGTGGAGCGACAGAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCGCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGCTGCACAAGCACGAGGTTAGCACGCTGCCAGAGCCGCCAGTGATCGAGGTGGATGATCCTCTGACGTGTCGCCGTTGCGGTCAGCTGCAATTCGAGACGAAGGAGGCATGGATTGAGCACAAGCTGGCCGATGCCAAGGTCGTCCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGAGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGGTGGAGGAGATGCTGAGGGCGAAGGAGCTTCTGCAGACACACATTAA
- Protein Sequence
- MWGGLQMPMTYACCCCWPKACFNQNPNPNPISNLNSNLNLNQNQSLRCSNVMPTPPHPLGQLSQTAVATMTSNVGATACAAAGNASSSASGSASASACAASVSAAVTTPLLMPVTLQSAAQQLRFFRRYSYNPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPIMTSEYDYATQHGVTAVAAAATLPPTAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIQDNSEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRAKHPSFAHATAAGGGGSADQQHLQLTSAHDTSADRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTGNSGLDHSPGKRSLLGALGIGISQSSNEESRSSSNNNNNNAGAGGAPLTSTPKPSGGAGAAAAAAAAATSAGSTSGGGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETGSIAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPKSLTITATPPLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPAMAHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELQQHKRSVHKSQLGSNSMKSTAATATATTTTASADLAETSTMSGPGVGANLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDDDDEDDDQLLLLDDGAGVGGGAGAGEGVDSNGGGNNTVVAVGKAGKTGGTNSHGSSSTGTLKIRIPEVACTICGARFTDQEMFSKHIQRHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQLHKHEVSTLPEPPVIEVDDPLTCRRCGQLQFETKEAWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGDAEGEGASADTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01550421;
- 90% Identity
- iTF_01550421;
- 80% Identity
- -