Basic Information

Gene Symbol
hang
Assembly
GCA_018904165.1
Location
JAEIFS010000732.1:6092051-6103876[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.18 13 6.4 1.0 3 23 152 173 151 173 0.93
2 16 0.13 9.5 6.8 3.5 3 22 280 299 278 299 0.89
3 16 0.0004 0.028 14.7 3.3 1 22 394 415 394 417 0.90
4 16 0.046 3.2 8.3 0.1 2 21 429 448 428 449 0.93
5 16 0.00046 0.032 14.5 0.2 2 23 586 608 585 608 0.95
6 16 0.0013 0.093 13.1 0.1 1 23 616 639 616 639 0.96
7 16 1.1e-05 0.00075 19.7 0.1 2 23 725 746 724 746 0.97
8 16 0.00019 0.013 15.8 2.9 2 23 876 898 875 898 0.97
9 16 0.015 1 9.8 0.2 2 23 907 929 906 929 0.95
10 16 0.0014 0.1 13.0 0.1 1 23 942 965 942 965 0.97
11 16 8.2e-05 0.0058 16.9 1.1 1 23 1012 1034 1012 1034 0.99
12 16 0.0013 0.09 13.1 0.9 1 23 1042 1065 1042 1065 0.96
13 16 0.045 3.2 8.3 0.4 2 19 1073 1090 1073 1091 0.94
14 16 4.6e-05 0.0033 17.7 0.4 3 23 1206 1226 1205 1226 0.98
15 16 0.0033 0.23 11.8 0.1 1 23 1261 1283 1261 1283 0.97
16 16 0.92 65 4.2 0.1 10 23 1325 1339 1323 1339 0.86

Sequence Information

Coding Sequence
ATGACTAGCAACGTCGGGGCCACCGCCTGTGCTGCCGCTGGCACTGCCTCATCCTCTGCTTCTGGGTCTGCGTCTGCATCTGCTTGTGCCGCCTCTGTCTCTGCTGCAGTCACGACTCCGTTGCTCATGCCGGTGACGCTGCAGAGCGCCGCTCAGCAGCTGCGCTTTTTCAGGCGCTATTCCTATAATCCGCTGCCCGCCGTGCCCATCAAGGATGAGCCCTTGGACGACACAGACGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGTTCCGAGCATGAGGGCGATGTGCCAATAATGACCTCCGAATATGATTATGCGACGCAGCATGGCGTAACGGCAGTTGCGGCAGCAGCAACGTTACCCCCCACCGCTGTCGCAAATGTGGCAGCCGCTGGTGATTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGACGCCACGAACGCAATCTGCATCCGAATCTATTTCAACTGTCGACAGATTCGCCAAACAACACGCCGATAACAAAGCCAACGCCAGCCCTGGCTGCCGCACTGGAGATACAGCGTGCTGCCGCAGCGGCGGCCGCCACAGCGGAGGCAACTAAAGCCGCAGCCGGTGGAAATATATCGACACAAAAGTATCGCCAGGTGGTCATGAATACGTTCATCAAGTGCGAGAACGGAGGCTACGACTACGACAACCCGGAGCAATATCAGCAGCTGTTGACGCGCGACAAGGTCGAGTTCATACAGGACAACAGCGAGTTCCTCGAACAATACCAGACAATGACCTGCCGCTGCTGCAACAAGTTCTTCAGCACGTACAAGAACTTCATGGCGCATGTGAGGAAGAAGTATCCGCTGCTGCCGCGCAATCTATGCTTTAATTGCCTCAAGATGAACGACTCCAAGGCGTTGTTCATCTCTCATCTGAAGAAGCGCAACTGCATCAACTTGTACCGTGTACTAAATGCTCTGCGTGCCAAACAGCCCAGTTTTGCTCATGCCACGGCAGCAGGAGGAGGAGGAGGATTGTCAGCAGATCAGCAACATCTGCAGCTAACGTCGGCACATGATACCTCTGCGGATCGGCCAGAGAAGCTGCGCGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGTCCCAAGGGCTTCCGCACCAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCGGTCGATCGGCGACGACATTATAACAATATGGACTGCATTGTCCGGCTCCGCTGCATGACCTGCGATGCCAAGCTGGAGACGCATCAGCGTTTCCTCGATCATGTCTATCAGGATCACTTGGGTGGCGTCAGCAGCGACAACGCGTCGACGGGCAACAGTGGCTTGGATCATTCGCCCGGCAAACGGAGTCTGCTGGGTGCTCTGGGCATTGGGATCAGTCAATCGTCCAACGAGGAGTCGCGCAGCAGCAGCAACAATAACAATAATAATGCTGGAGCTGGTGGAGCACCGTTAACCTCAACGCCCAAGCTAAGTGGCGGAGCTGGAGCAGCAGCAGCGGCGGCGGCGGCAGCGGCAGCCACCTCGGCTGGCTCCACGAGTGGCGGCGGCAGTCGGGATGCTCCGAAGTCGCAGTACTTCTCGCGCATGCCACAAGTGTGTCCGATCTGTGGACAGCAGTACAACAACTACAACAATGTGCTGCGCCACATGGAGTCAAAGCATCCCAATAAGTTGCCCGAGACATACAAGTGCGTGCGCTGTGGACTGGGCTATCCGCGCATCTCGTACCTGCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCGGGCGGCTTCGAGTACATTGTGAATGCGGATGCAGTCAAGCTGGCGGATGGCAGCACACCCAATGTCTATACGGGACGCTATGACTATGTCATGAAGGATCTGATGTCCATAACAAATGGTGGGACACTCGATGATGACGACGAGGAGACCGGCAGCATAGCCAAGAAGATGCGTCTCGACGACAGCAGCAACAACAGCAGCATCAACACGAGCATTGCCAACCAGCAGAAGGAGTGCCCCATCTGCAACGCTGTGTTCAGCAACAACATTGGCCTCTCCAATCACATGCGCTCCCACTACACCGCCTCGACAGCGACCAATGCAGCCTTGGCGGCGGCAAATCGCATGACGCCCAAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCTCCAGCGATGGCCCATCAGACGCCACAGGAGCAAGCTGTCTTTCGGCGTAGCTTGGATCAGGCTGCCGATCGTCGCTTCCGACGCATGCGTTGCCGCATCTGTCAGCGTCGGTTCAGCTCGAAGAAGTCCTATCGCTACCACATGCTCACCGACCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAATGCGGAGTTTGCGTACGAGAAGGGACTGAAGGTGCATCTGTTCAAGGTGCACGGGCGTGCGATTAAGGACGAGATGATTGTGAAGCAGTTCGAGTGTGATGTCTGCTCCATTGTCTACAGCTCGGAGCTGGAGCTGCAGCAGCACAAGCGCAGTGTACACAAGTCCCAATTGGGCAGCAATTCAATGAAATCTACAACTGCAACAGCGACGGCAACCACAACTGCTGCCGCTGCTGATCTCGCCGAGACATCAACAATGTCGGGGCCGGGAGTGGGGGCCAGTCTGCCGCTGTACTGGTATCAGTGCAAGTATTGTCCATCTAACTTCAATACCAACAAGAAGCTGGCGATCCACATCAATTCGCACGATGAGTTCGACTCGAACGACTATTCGTGCAAGGATTGCGGCAATGTCTACAGCGGTCGCAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCTGATCCCGCCGAGTGCACGCTGTGCCGTAAGATGTTCTTCGACCGACAGATGCTGGAGAATCATACGCCAACCTGCAATCGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCAGCTGCTACTGCTGGATGATGGAGCAGGAGTGGGAGAAGGAGTAGCTGTTGCTGGCGAGGGTGTCGATAGCAGCAATGGTGGTGGCAACAACACTATTCTTGCTGTTGGCAAGACTGGCAAGACTGGGGGCACAAACAGCCACAGCAGCAGCAGCGCAGGCACACTGAAGATACGCATACCCGAGGTGGCATGCACCATTTGCGGGGCACGCTTCACGGACCAGGAGATGTTTAGCAAGCACATACAGCGACACGAACAGGAACTCTATGTGGATAACCCGTTGGCAGCGATGTTCGACGATGGCCCCGCCGATGCTGGACAGTTTCAGGTGGAGCGGCAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCGCAGGTGATCGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGGTGAGCTTTTTGGGCTTGTGCAGCGAGGTGAATCTAATCAGTATCCAGCATCATCAATTGATGGTGATGATGACCGCACCCACAAAAAACCGATGGATACCCTATAATACCAACAACAACCTGCGTCGCCACATGTATGAGCTGCACAAGCACGAGGTTAGCACGCTGCCAGAGCCGCCAGTGATTGAGGTGGATGATCCTCTGAGCTGTCGCCGTTGCGGTCAGCTGCAGTTCGAGACGAAGGAGGCATGGATCGAGCATAAGCTGGCCGATGCCAAGGTCGTCCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGAATACAGCCATGCCCGTCCTGGGATTCGAACCCCCCTGTAAACAATACAAATAG
Protein Sequence
MTSNVGATACAAAGTASSSASGSASASACAASVSAAVTTPLLMPVTLQSAAQQLRFFRRYSYNPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPIMTSEYDYATQHGVTAVAAAATLPPTAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIQDNSEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRAKQPSFAHATAAGGGGGLSADQQHLQLTSAHDTSADRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTGNSGLDHSPGKRSLLGALGIGISQSSNEESRSSSNNNNNNAGAGGAPLTSTPKLSGGAGAAAAAAAAAAATSAGSTSGGGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETGSIAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPAMAHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELQQHKRSVHKSQLGSNSMKSTTATATATTTAAAADLAETSTMSGPGVGASLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQLLLLDDGAGVGEGVAVAGEGVDSSNGGGNNTILAVGKTGKTGGTNSHSSSSAGTLKIRIPEVACTICGARFTDQEMFSKHIQRHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQVSFLGLCSEVNLISIQHHQLMVMMTAPTKNRWIPYNTNNNLRRHMYELHKHEVSTLPEPPVIEVDDPLSCRRCGQLQFETKEAWIEHKLADAKVVRPFCPFQWGCDLNTAMPVLGFEPPCKQYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01551146;
90% Identity
iTF_01551146;
80% Identity
-