Basic Information

Insect: Zaprionus bogoriensis
Gene Symbol: -
Assembly: GCA_035046045.1
Location: JAWNOI010000222.1:59332-63635[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3e-07 1.9e-05 24.6 3.3 1 23 217 239 217 239 0.98

2 17 0.0011 0.068 13.5 2.8 1 23 246 268 246 268 0.98

3 17 0.15 9.3 6.8 0.7 2 23 300 321 299 321 0.94

4 17 0.016 1 9.8 4.3 1 23 411 434 411 434 0.97

5 17 0.021 1.3 9.4 0.6 1 19 441 459 441 461 0.94

6 17 0.0089 0.56 10.6 4.7 1 23 471 493 471 493 0.95

7 17 3.8e-05 0.0024 18.1 0.4 1 23 500 523 500 523 0.97

8 17 8.6e-05 0.0055 16.9 1.1 2 23 531 552 530 552 0.96

9 17 0.0037 0.23 11.8 0.0 2 21 579 598 578 599 0.94

10 17 0.0085 0.54 10.7 1.9 1 23 651 674 651 674 0.96

11 17 0.015 0.95 9.9 0.5 1 23 711 734 711 734 0.96

12 17 0.00088 0.055 13.8 1.0 2 23 780 802 779 802 0.95

13 17 0.0036 0.23 11.8 0.2 1 23 816 838 816 838 0.95

14 17 0.00011 0.0067 16.6 1.2 1 23 844 866 844 866 0.99

15 17 3.4e-07 2.1e-05 24.5 2.6 1 23 872 894 872 894 0.98

16 17 1.1e-05 0.0007 19.7 3.8 1 23 900 922 900 922 0.97

17 17 0.0017 0.11 12.8 0.3 1 23 928 952 928 952 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3e-07	1.9e-05	24.6	3.3	1	23	217	239	217	239	0.98
2	17	0.0011	0.068	13.5	2.8	1	23	246	268	246	268	0.98
3	17	0.15	9.3	6.8	0.7	2	23	300	321	299	321	0.94
4	17	0.016	1	9.8	4.3	1	23	411	434	411	434	0.97
5	17	0.021	1.3	9.4	0.6	1	19	441	459	441	461	0.94
6	17	0.0089	0.56	10.6	4.7	1	23	471	493	471	493	0.95
7	17	3.8e-05	0.0024	18.1	0.4	1	23	500	523	500	523	0.97
8	17	8.6e-05	0.0055	16.9	1.1	2	23	531	552	530	552	0.96
9	17	0.0037	0.23	11.8	0.0	2	21	579	598	578	599	0.94
10	17	0.0085	0.54	10.7	1.9	1	23	651	674	651	674	0.96
11	17	0.015	0.95	9.9	0.5	1	23	711	734	711	734	0.96
12	17	0.00088	0.055	13.8	1.0	2	23	780	802	779	802	0.95
13	17	0.0036	0.23	11.8	0.2	1	23	816	838	816	838	0.95
14	17	0.00011	0.0067	16.6	1.2	1	23	844	866	844	866	0.99
15	17	3.4e-07	2.1e-05	24.5	2.6	1	23	872	894	872	894	0.98
16	17	1.1e-05	0.0007	19.7	3.8	1	23	900	922	900	922	0.97
17	17	0.0017	0.11	12.8	0.3	1	23	928	952	928	952	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCCATCATTTGCCGTACCTGCGATGCGAAGGACACGGACAAGTTGTACAAGCTGGCAACGGCCACCAAGAGGTTTCCGGACAAGCTGCTGTCCGACATTTTAACGGAATTGACGCATATTCAGCTGGACGAATCACTGGGCCAACAGTTGCCGCAATGCTTGTGCGGCACCTGCGCGCGAAAGCTCATAGCCGCGTACTACTTTGTGAAGCAGGCGCTGGCTGCCAACGAGCTGCTGATGAACCACGTCCAGGACGGCGACAAGGGCGTGGGCAACGACTGCCTGCAGGAGGTGCCCATGGAGCTGTGCGCCGAGCAGCATGTGGAGGTTAAGCTGGAAACGGAGGACGAGGACCTGGAGAACGACATCACCTGCACAGAGCTGCCCGAGTTCACGACAGTACAAAATGCCAATGATGTGGACTGTGCAATAGATAGCAAAAAGTCAACCGATCCACTGACAATGCTTGATCCCGTCAAGCAGGAACTCGATGCTGTTCTCGCCCGAGCGGTCTATGTCCAAGAGCAAGAGTATAAGGCTGATCTCGACGAGGATGATTCCCTCGACGatctgccgctgcagcagcgcgtcaaCAAGTGGAGGCAGTCGGACAAGCTGCGCTCGTTGAAGCGTCAAATCTTCAAGTGCCACGAGTGCCCGAAGAGCTTCAAGCGTCCGCGATATCTCAAGCAGCATGCGCGCGTGCACAAGCCGAAGAGCGACTGGTTCTCGTGCTCCTTCTGCATACGCAAGTTCAGCCACAGCGAGGCGCTGCAGACGCACCTCAGAATCCACGCCGACTCCAAGCGCTCGGCCAATCTGAGCGAGAGCAAGAAGGCCAAGGAGGTGGACGTGAACGTGTGCAAGCCGCACGGCTACAAGCTCATCGAGTGCATGATCTGTCAGAATCAGTACGATAAGATCGCCCACCTGCGACGCCATCTGGAGCAGCATCCGGAGATCGTGAACTTCGGCTCGCGCTCTAATCTGCCGATGAGCGAGCTGGCCGAGCTCTTCTATCCAGATGCCAAGGACGTCAgcgaggagcagctgaagctgctcatACGCAAAGACCTCGCAGCGGGCATCTATCAGCGCTTCTACTCCATCACGGATCAGTCGGGCTACGAGATGGATCTGGACAGTTCAGAGACGGACAGCGAGCTGGAACTGGACGCTGATGATCCCATGAAgcagctgcgccgcctgccCAAAGCCAAATACACATGCGAGCTCTGCCAggtgcgctgccagcgcaagTACCAGCTTTACGACCATCAGCGCCAGTCGCACGACTGGCTGGAGGCGCCGCATGTCTGCGGACGCTGCGACGCACGCTTCGTCAGccaacagctgctgcggcacCACAACGAGCTGCAGTGCAAGAACGCCCAGAAGCGTTTCCTATGCCACAAATGTCCGCTTCGTTTCCGCTGGCGGCACAACTTGAAGCTGCACATACGTGAGCACAGGATCACAAATCAAACGTTCGAGTGCGCGGACTGCAAGCGCGTCTTCGACAAGAAGAAATCGCTGACGGTGCACCTGCTCAGCGTGCACGCGGAGGAGTCCAAGCTGATACCGTGCCAATGGTGCAGTCGCAAGTTCTACCGTCGCGACTATCTGGTGAAGCATCTGAAGCGACACGGCATTAGGGAGCCGGACATACCGCTGGCGGAGACACTCATTGCGGCCACCTCGAAGCCGAACGGGCCCAAGCGGATCACGTGCAAGATATGCAACATGCAGTTCGCCCGCATCATCGATCTGCGCGCGCACATTCAGCTGGAACTgaagctgtcgctgtcgccgcacCAGCAGTACGACTCGCCGCACAACTATTCCATAACGAACGCGTCCGGctacgagctgcagctggacgacTCCGACACCGAGGATGAACTGCACCTATCACTCGCCAATTCCGCCGCGCGCTTCGTCTACGTCTGCGAGCTGTGCCGGGTGCAGTGCAAGCGCAAGTACGAGATGATCCAGCACCAGCGGGCCATGCACCAGTTCGACAAGATGCCGTACGAGTGCGAGCGGTGCATCTTCAAGTGCGTCTGCAAGAGCATCCTGGAGCAGCACCGGCGGTCGCAGTGCCACAGCGCGGAGAAGAAGTACAcgtgcagccgctgcagctacAAGTTCATGTGGCCCGAGAACCTCGAGCTacacatgcagctgcagcatggcATGCCTGCCGGGGCGGGGGCCGAGACTCTGCCCACCAGTGTGGCGACAGTCAGCGCCGATCGCATGCCCGCAGTGCCGGcggatgcagcagcgacagcagcgccaacagcgACGGAAgatgtgcagctgctgcagtgcccGCACTGCGATCGCACGTACCAGATGAAGGCGCGCCTCAGCAACCACATACGGGACGTACATATCAACGGGGATCGCAAGCGCAAGGAGGCCATCAAGAAGTTCCTATGCTCGCTCTGCGGCCTGGAGACGCAGTCGGCTGCCACGCTGGTGACGCACATGCGCCGTCACACCGGCGAGAAGCCCTTCAAGTGTGATCTCTGCGAAATGGCCTTCCCGCGCCACTCGGAGATGATCTCGCACCGGCGCATGCACACGGGCGAGAAGCCATTCCACTGCACCGTCTGCGGGAAGGACTTCGCGCGCTCCGACAAGCTGAAGCGGCACATGCTCACGCACAGCGGCCTGAAGCCGCACAAGTGCACGTACTGCGACAAGAGCTATCGCCAGGCCAAGGACCTGAagctgcacctgcagcagcacaccGGCGAGTGCCCCTTCATCTGCGGCACCTGTGGCGAGCGCTTCATCCAGGGCAAGGCGCTGGAGAAGCACCGCATGATGCGGCGCCACTTCGACGAGGTGGACGAGCGCAACGCCAACACGCTGAGCgcgtaa
Protein Sequence: MKLPIICRTCDAKDTDKLYKLATATKRFPDKLLSDILTELTHIQLDESLGQQLPQCLCGTCARKLIAAYYFVKQALAANELLMNHVQDGDKGVGNDCLQEVPMELCAEQHVEVKLETEDEDLENDITCTELPEFTTVQNANDVDCAIDSKKSTDPLTMLDPVKQELDAVLARAVYVQEQEYKADLDEDDSLDDLPLQQRVNKWRQSDKLRSLKRQIFKCHECPKSFKRPRYLKQHARVHKPKSDWFSCSFCIRKFSHSEALQTHLRIHADSKRSANLSESKKAKEVDVNVCKPHGYKLIECMICQNQYDKIAHLRRHLEQHPEIVNFGSRSNLPMSELAELFYPDAKDVSEEQLKLLIRKDLAAGIYQRFYSITDQSGYEMDLDSSETDSELELDADDPMKQLRRLPKAKYTCELCQVRCQRKYQLYDHQRQSHDWLEAPHVCGRCDARFVSQQLLRHHNELQCKNAQKRFLCHKCPLRFRWRHNLKLHIREHRITNQTFECADCKRVFDKKKSLTVHLLSVHAEESKLIPCQWCSRKFYRRDYLVKHLKRHGIREPDIPLAETLIAATSKPNGPKRITCKICNMQFARIIDLRAHIQLELKLSLSPHQQYDSPHNYSITNASGYELQLDDSDTEDELHLSLANSAARFVYVCELCRVQCKRKYEMIQHQRAMHQFDKMPYECERCIFKCVCKSILEQHRRSQCHSAEKKYTCSRCSYKFMWPENLELHMQLQHGMPAGAGAETLPTSVATVSADRMPAVPADAAATAAPTATEDVQLLQCPHCDRTYQMKARLSNHIRDVHINGDRKRKEAIKKFLCSLCGLETQSAATLVTHMRRHTGEKPFKCDLCEMAFPRHSEMISHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHKCTYCDKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQGKALEKHRMMRRHFDEVDERNANTLSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00519319;
90% Identity: -
80% Identity: -