Basic Information

Insect: Zaprionus africanus
Gene Symbol: -
Assembly: GCA_018151435.1
Location: JAECXB010002206.1:3691312-3693485[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.9e-06 0.00013 22.1 3.1 1 23 337 360 337 360 0.95

2 8 0.0037 0.26 11.7 0.9 1 21 368 388 368 389 0.95

3 8 8.1e-05 0.0056 16.9 4.1 1 23 396 419 396 419 0.97

4 8 1.8e-07 1.2e-05 25.3 2.3 1 23 425 447 425 447 0.97

5 8 0.00036 0.025 14.9 4.7 1 23 453 475 453 475 0.98

6 8 0.32 22 5.6 7.4 1 23 481 504 481 504 0.92

7 8 1.9e-05 0.0013 18.9 2.4 1 23 512 534 512 534 0.98

8 8 0.00054 0.038 14.3 3.2 1 23 540 564 540 564 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.9e-06	0.00013	22.1	3.1	1	23	337	360	337	360	0.95
2	8	0.0037	0.26	11.7	0.9	1	21	368	388	368	389	0.95
3	8	8.1e-05	0.0056	16.9	4.1	1	23	396	419	396	419	0.97
4	8	1.8e-07	1.2e-05	25.3	2.3	1	23	425	447	425	447	0.97
5	8	0.00036	0.025	14.9	4.7	1	23	453	475	453	475	0.98
6	8	0.32	22	5.6	7.4	1	23	481	504	481	504	0.92
7	8	1.9e-05	0.0013	18.9	2.4	1	23	512	534	512	534	0.98
8	8	0.00054	0.038	14.3	3.2	1	23	540	564	540	564	0.92

Sequence Information

Coding Sequence: ATGATCGCAACAAATAATGCAAATCGCAAAAAATCGTTGCGGTTTGAGAAGGATGACAGGATGCGACTTATAGATGCAGTTAGGACCAGACGGCTGCTCTGGGACAAGACACACAGTGAGCACAGTGATTTCGCGAGGGTTAAGTCAGCCTGGCAATCAGTGGGTCAGCAGTTGAACAGAGATCCAAATGAATGTAAGGTGGCTTGGCGATCATTGCGACAGAGTTATCGGTATCACTGTAAGGTGGCGTATAACCGCTTTAAATCTGACGAATATGATGAAGACGGCGAAATAGATCCATTAGAAACACCTGACATCCAATGGGAGTTTGCTAATGCTATGGCTTTCTTACAGGAGTTATCCAAGAAGAGGACGCAGCCGGAACCATTAAACGATGCGACTAACGAAAGTGCGGCGACAGAAGATTACACTGATGCGGAATACTTAGAAATTATTGAACTAGACGATAATGATGCTGACATAGTCGACGATGATTGGGAGGAAGACAGTGAAAAGCATGAAATTAATGGACTAAGAGAGGTAATATGCAGAACATGTGGCCAACCAACAGATGCTCCAACATCACAGGAATTATTTCACTCTGATAATTACTTGATTTTGGAGCAGATTACAATGATGACAGAACTTACGCTAAAACCAGAAGAGGATCTATCAAATTTTATCTGCGAACTCTGTCTGCAAAAACTAGAGATCGCTGTTGAATTTCGTAGACTTTGCATTGAGGCACAAACACAGGGCATGATACAAGTACAAAGAAAAAAAGAAGATGAGGATGTTATGTATTTCAGGACGGAAAAAATAAACGACTCAAGTCTTATCGACGTGAGTGTTCAAGAAGACCGACTCGAAGACGTTGATCACTCAGATAACGATGACAGCTATGAGGATCTTAATCAAGATTATGAGCATCTTGATGAACAATTAGTAAGATCAACACCATCACCAAAGAGTAGAAAAACTAAAACAAAAGAGCAGACAAGTCAAAAATATCAATGTCATCAGTGTGGATTGACATTTACAAGCCAAGATCTGCTTAAGATGCACATGCACGAGATACACGAAACACAACTTCATACAAGATTTGTGTGCAGGCATTGTGGACACGACTTCAAGTACTCGGAGCCGCTTGTTGAGCACCTAAAGAGCATTGGAGCCAAATTTGACTACATGTGCGAGGATTGTGGGCAAAAGTTTTACAGCAGACATTTTCTACTGAAACATAAGAGACGCGTACATGGTCAGGCAACTGCATATATTTGCCACATTTGTGGCAAGAACTTTACCACAAGCTTTAATCTACGCAATCACATCGTAAGACACGGGGGTACGCGACCTCACAAGTGCAAACTGTGCAAGGCAGCCTTCTGCACCAAAGCCGAGTTAAATGGCCACAAGCGCACGCACGATAATGTGCGTCCGTATCCATGTCGATATGGCTGCGGTAAATCCTTTCGCCACTGCAGCAATCGCAGTTGTCACGAGAGGGTGCATATGGATAGAAGCTTGCGGCCTTTTCAATGTGAATATTGCGACAAATCTTTTGTTACCCAAGGCGACTGCAGATCACATCAAATGGTGCACACTATGAGTCGTAATTTTAGCTGTGAAATTTGCGAACAAAGCTTTAAGCTGCAGAAACATTATCAGCAGCATCTGTTAACAAAGTCACATAAAAGGGCCGAGGCTCGCGCATCAACGATCAAGGAGAATAATGTAGAAACATAG
Protein Sequence: MIATNNANRKKSLRFEKDDRMRLIDAVRTRRLLWDKTHSEHSDFARVKSAWQSVGQQLNRDPNECKVAWRSLRQSYRYHCKVAYNRFKSDEYDEDGEIDPLETPDIQWEFANAMAFLQELSKKRTQPEPLNDATNESAATEDYTDAEYLEIIELDDNDADIVDDDWEEDSEKHEINGLREVICRTCGQPTDAPTSQELFHSDNYLILEQITMMTELTLKPEEDLSNFICELCLQKLEIAVEFRRLCIEAQTQGMIQVQRKKEDEDVMYFRTEKINDSSLIDVSVQEDRLEDVDHSDNDDSYEDLNQDYEHLDEQLVRSTPSPKSRKTKTKEQTSQKYQCHQCGLTFTSQDLLKMHMHEIHETQLHTRFVCRHCGHDFKYSEPLVEHLKSIGAKFDYMCEDCGQKFYSRHFLLKHKRRVHGQATAYICHICGKNFTTSFNLRNHIVRHGGTRPHKCKLCKAAFCTKAELNGHKRTHDNVRPYPCRYGCGKSFRHCSNRSCHERVHMDRSLRPFQCEYCDKSFVTQGDCRSHQMVHTMSRNFSCEICEQSFKLQKHYQQHLLTKSHKRAEARASTIKENNVET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01552669; iTF_01554178; iTF_01551959; iTF_01550497; iTF_01559945; iTF_01555632; iTF_01551221; iTF_01557772; iTF_01558523; iTF_01557052;
90% Identity: iTF_01550497;
80% Identity: -