Yseq034635.3
Basic Information
- Insect
- Ypsolopha sequella
- Gene Symbol
- egg
- Assembly
- GCA_934041175.1
- Location
- CAKOGU010001770.1:76934-137316[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.1e-14 5.3e-10 39.9 0.0 5 74 861 923 857 926 0.87 2 3 2.2 1.3e+04 -3.0 0.0 50 73 931 952 930 955 0.73 3 3 0.74 4.3e+03 -1.5 0.0 28 43 1250 1276 1226 1281 0.71
Sequence Information
- Coding Sequence
- ATGAAACACAACGTGCATACAAACTTGGACATACAAGAGGTGAACAAGGCCGCGGCGACGACGCCAGTAGACCAGCCCGATGACCTCACGAATGACGACACAGATTCTCAAGTGACGACCGTGAACATCCCTAAAGAAGTGGACATCATTAGCGCCGCTACTGGTACTACGTTAGAATTAGAAGACAAAGAAGGGGAAACTGTTATAAAAGGTGTCCCGAAGCCAGTAACAAATAAAAAGGCCAAGTTGAATACGAGCGAGATTTCAATAAAGACTGCGACGGCTTTAGAATCGACGCTTGTCATACCTGAGACGAAGGTAGCAGACATAGCCGAAAAGCAGGTTTTGAAACCGAACTTCGGTTTGGAAGTGTTTAATTTGGACTCTGATGACGAAAACAGCACCGAGGCAAAACAAAAAGTGAAACTAGTCACACCCCCCAAGCCTCCCTCCCCGCGGCTGATATCTCGCTGCGTCAACCCGATGTGCACGTCCGACGCGAGCGTCGACAGAGTATCGGCGTCGGCGGCCATCTTGCGCTTCTATGACGTGTCGCGCCGGCGCAAGGCCAAGGTGTGTCGGCCTTGCGCGGACTGCGCCGCCGAGAGATCCTTCGGACTAGTGGAGGGTGTAATGTCGATGTGTCCGCTGCTCGAGATAGAGATGTCCCGGTCGTCACAGCAGCTCGTCGAGATCTCTGACTCGGACTCCGACGGCGAACAGGAAGACGCGACGACGAAAGACGCAGACAAGATCGGTGTAGAGGGCGCCACGCTACTAGAAGAGCAGCTGGCGGACATAATAAACTCGACGTGGCGCAAGTACAACCTCGACGATCGACTCAAGGTAGCCAAGGATGAGATCGATGGTGAACTAGAGAAATTGGAGAAGGAACGCCTTGAAATTGACGCAATCCTTAATACCTGTCAGGCTGCCACCGACAAGCTCCGCCTTGAGCTGTATGCGACGTTCAACTTACCGAACACTCGCTCCGTGCCCGCATTTGATATCATGGACACGCCGTTTGCACAATATTCTACGGCAGTTTCCGAGACAGAAAGCAATAGTGAAGAGGCCGAAGTGCGTCGCTCCAAGAGAAAGACGACATTAGGGCCGAAGAAGGAATCTATTGAACCCTACGTTCAACCTGGCGATGCTAAGGACGACGATAACACAGACATCAAAGTGGTGAAATTGTCGGCGGAAGTAGCTCCTGTTGACTTGCCACCGTCAGGGACGCTCGTTCGGCCCGCTCTGATATCTGGACAAACAGTATTCGCGATGCGTCACGCTTTTGGTTCGTGGCTCAAGGGAATCGTGCAAGACATCTATCCAAAGGGCAGTACGCCAATATCAGCTCAGTTCACGGTGTGTAAGGTGCGATTCGAGCACAAAGTAAAGAACCCAGTGGCGCAGATCTCTGCCCGACACATGGCGTACCCGGACCCAGCTAACGTTAGATTGACTATAGGTACCCGCGTCATAGCCCTCTTCAGCGACATAATGGACGCAACAAAACGCAGGTCCTACTATTCGGGCGTCATTGCCGAGATGCCCAACCCTGTTAACAGTTATAGGTACCTAGTATTCTTCGACGACGGTTACGCGCAATACGTCACACACACAGAGATACGAGTGGTCTGCGAATGCTCCTCTTTGGTGTGGGAAGAGGTACATCCATTCTCCCGCGAGTTTGTGCGACAATATCTAGTCAGTTACCCAGAGAGGCCAATGGTGAGACTGCATGCCGGACAAAGTCTCAAGACTGAGTGGAATGGAAAATGGTGGGTATCGAAGGTGATAAAAGTGGATGCGTCCCTCGTCCAGATCCACTTCGAAGCGGACGATAGAACCGAGTGGATATACCGTGGCTCCACGAGACTCGCGCCTCTGTACCTGGAGCTACAGAACGCGGAGAGACCTCGGGCTAGGCCGTTACCTAGGTCCACGCAACATAGGATCCACTCGGGTGTGGGCTCCACGAGACTCGCGCCTCTGTACCTGGAGCTACAGAACGCGGAGAGACCTCGGGCTAGGCCGTTACCTAGGTCCACGCAACATAGGATCCACTCGGGTGTGGGCTCCACGAGACTCGCGCCTCTGTACCTGGAGCTACAGAACGCGGAGAGACCTCGGGCTAGGCCGTTACCTAGGTCCACGCAACATAGGATCCACTCGGGTGTGGGCTCCACGAGACTCGCGCCTCTGTACCTGGAGCTACAGAACGCGGAGAGACCTCGGGCTAGGCCGTTACCTAGGTCCACGCAACATAGGATAAACACTCCTTACGTAGAATACACGAGGTCAGACGAACAGGAACCTAAAGCTGTTGTGCAGGCACAGAAGGAGAATGAGGACTTCAAGAAGCAGAGAGCTGTGGCGAAGAAGTCTACAGCGTTACCGACGACCACGGAGCATCGACCTCCACCGGTGCACCAGCAACCTCTCGATAACGTGATGAGCAGAGTTGTCTATTACACACCCAAAGCGGCGGTAAAACCGCACAAAATGTACCCGCACACTTGCTCGCCGAAGTGCAAGAGAACTGATGTACTTCCGCTGAAGGAACTGCGCACTTACAACCCCTTAGCCAGACCGCTGCTCAGTGGCTGGGAGAGACAAATCCTCCGCTTCAAAGGCCGCAAGGAGGTGATGTACCGCGCTCCCTGCGGCCGCCGTCTCAGGGACCTGCCAGAGTTGCACAGGTACCTCCGAGCAACGAATTCGGAGATGGGCGTGGAACTGTTCGACTTCGCCGTCAACACGCACTGCCTGGCCGAGTTCGTGCTGAACAGGTACCTCCGAGCGACGAACTCGGAGATGGGCGCGGAACTGTTTGACTTCGCCGTCAACACGCACTGCCTGGCCGAGTTCGTGCTGAACAGGTGTCTCGTCAGTAAGAAGGATCTCTCGCACGGCAAAGAGAACGTGCCGGTCCCCTGTGTGAACTACTACGACAACTCTCTCCCAGAGTTCTGTAGCTACAACACTGAGCGGACACCGACCGCTGGGGTCCCGCTGAACCTGGACCCCGACTTCCTGTGCGGCTGTGACTGTACCGACGACTGTCAGGATAAGTCCAAATGCGCGTGTTGGAAGATGACGCTGGACGGTGCGCACACTATCGGTATGGACATCGACGACATTGGATACGTATACAAGCGACTACTGGACCCCGTGCCGTCCGGCATATACGAGTGTAACTCGAGATGTAAATGCAAACAGACCTGCCTTAACAGAGTGGCGCAACATCCTCTGCAACTAAAATTACAGGTGTTCAAGACATTGAACCGCGGTTGGGGAATCCGAGCTCTGAACGACGTGCCGCGGGGTTCCTTCCTTTGTGTCTACGCTGGAAACTTGTTGACGGATGCCACTGCTAATTTGGACGGTCTGAACGAAGGCGATGAGTACCTCGCAGAGCTGGACTACATAGAGGTCGTGGAGCAGATGAAGGAGGGGTACGAGGGGGACATACCTGACAAGGACAAGGAGTTAGATAAGTACCTGGCAGAGCTGGACTACATAGAGGTCGTGGAGCAGATGAAGGAGGGGTACGAGGGGGACATACCGGACAAGGACAAGGAGTTAGATAAGTACCTGGCAGAGCTGGACTACATAGACGTCGTGGAGCAGATGAAGGAGGGGTACGAGGGGGACATACCTGACAAGGACAAGGAGTTAGATAAGTACCTGGCAGAGCTGGACTACATAGAGGTCGTGGAGCAGATGAAGGAGGGGTACGAGGGGGACATACCGGACAAGGACAAGGAGTTAGATAAGGTGCGTTTACATAAAGTACATAAATCTCCAACAGGACAGTACCTGGCAGAGCTGGACTACATAGAGGTCGTGGAGCAGATGAAGGAGGGGTACGAGGGGGACATACCGGACAAGGACAAGGAGTTAGATAAGTATCTGGCAGAGCTGGACTACATAGACGTCGTGGAGCAGATGAAGGAGGGGTGCGAGGGGGACATACCTGACAAGGACAAGGAGTTAGATAAGAAAAAGTCCCAGTCGGACGAGGAAGACCAAGAGGAGTCCTCGTCATCAGAGGACGAGAGGAGAGAGAAGGAGAGAGAGAGACAGGACAACGACTTCAGACCCGCGTACGAGATACCGACCGGCTGTCTAGAGTTCAATAAACGACTCCGCAAGCGAGACAAAAAGAAGAAGGACAAAAACAAAGGTTCAGAGCTACAATCCGGCGAGAAGAAAAGGGACGACTGTATCACTATCAGTGACGACGACGAAGAAGTGAGAGAACCCCAAAGATTCACGGCGCAGGCAGGCATGGGTGCCAACGACTTTATATCAAAACACAATAACATAATTCAAAGAAGATTGAAAGTGTTACCACACGACCGTCTGAGAGAAACAGAGATGGTGGCTCTGATAAGAACCGTCATGGAGAAACGGAAGTTGGCTCTGAAAAGAGCCGTTCCACGCAGCCGGAGTTTGGAGGAGCGCACGACGACATTCCACGGCGAGAGCGGCGCGCGGACGGAGCGAAGTGTTGATCCATCGGCGGTCGACGCAGCTAAGAGGACGCGCGGGCGCGAGAGCTCGTTTATATATCAATTCGAACCGGCATTCGGCTCACCTCGGATGCAGATCGGTTTTCGGCACTTCGACATCTTTCATCTCTGTTCATCTATCGTCATCCTTGTCATAATATTTAATATATAA
- Protein Sequence
- MKHNVHTNLDIQEVNKAAATTPVDQPDDLTNDDTDSQVTTVNIPKEVDIISAATGTTLELEDKEGETVIKGVPKPVTNKKAKLNTSEISIKTATALESTLVIPETKVADIAEKQVLKPNFGLEVFNLDSDDENSTEAKQKVKLVTPPKPPSPRLISRCVNPMCTSDASVDRVSASAAILRFYDVSRRRKAKVCRPCADCAAERSFGLVEGVMSMCPLLEIEMSRSSQQLVEISDSDSDGEQEDATTKDADKIGVEGATLLEEQLADIINSTWRKYNLDDRLKVAKDEIDGELEKLEKERLEIDAILNTCQAATDKLRLELYATFNLPNTRSVPAFDIMDTPFAQYSTAVSETESNSEEAEVRRSKRKTTLGPKKESIEPYVQPGDAKDDDNTDIKVVKLSAEVAPVDLPPSGTLVRPALISGQTVFAMRHAFGSWLKGIVQDIYPKGSTPISAQFTVCKVRFEHKVKNPVAQISARHMAYPDPANVRLTIGTRVIALFSDIMDATKRRSYYSGVIAEMPNPVNSYRYLVFFDDGYAQYVTHTEIRVVCECSSLVWEEVHPFSREFVRQYLVSYPERPMVRLHAGQSLKTEWNGKWWVSKVIKVDASLVQIHFEADDRTEWIYRGSTRLAPLYLELQNAERPRARPLPRSTQHRIHSGVGSTRLAPLYLELQNAERPRARPLPRSTQHRIHSGVGSTRLAPLYLELQNAERPRARPLPRSTQHRIHSGVGSTRLAPLYLELQNAERPRARPLPRSTQHRINTPYVEYTRSDEQEPKAVVQAQKENEDFKKQRAVAKKSTALPTTTEHRPPPVHQQPLDNVMSRVVYYTPKAAVKPHKMYPHTCSPKCKRTDVLPLKELRTYNPLARPLLSGWERQILRFKGRKEVMYRAPCGRRLRDLPELHRYLRATNSEMGVELFDFAVNTHCLAEFVLNRYLRATNSEMGAELFDFAVNTHCLAEFVLNRCLVSKKDLSHGKENVPVPCVNYYDNSLPEFCSYNTERTPTAGVPLNLDPDFLCGCDCTDDCQDKSKCACWKMTLDGAHTIGMDIDDIGYVYKRLLDPVPSGIYECNSRCKCKQTCLNRVAQHPLQLKLQVFKTLNRGWGIRALNDVPRGSFLCVYAGNLLTDATANLDGLNEGDEYLAELDYIEVVEQMKEGYEGDIPDKDKELDKYLAELDYIEVVEQMKEGYEGDIPDKDKELDKYLAELDYIDVVEQMKEGYEGDIPDKDKELDKYLAELDYIEVVEQMKEGYEGDIPDKDKELDKVRLHKVHKSPTGQYLAELDYIEVVEQMKEGYEGDIPDKDKELDKYLAELDYIDVVEQMKEGCEGDIPDKDKELDKKKSQSDEEDQEESSSSEDERREKERERQDNDFRPAYEIPTGCLEFNKRLRKRDKKKKDKNKGSELQSGEKKRDDCITISDDDEEVREPQRFTAQAGMGANDFISKHNNIIQRRLKVLPHDRLRETEMVALIRTVMEKRKLALKRAVPRSRSLEERTTTFHGESGARTERSVDPSAVDAAKRTRGRESSFIYQFEPAFGSPRMQIGFRHFDIFHLCSSIVILVIIFNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -