Basic Information

Insect: Yponomeuta rorrellus
Gene Symbol: -
Assembly: GCA_947308005.1
Location: OX371025.1:1436413-1445976[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.062 4.5 8.5 0.2 2 23 105 125 104 125 0.96

2 24 0.0061 0.45 11.6 2.3 1 23 131 154 131 154 0.97

3 24 0.0037 0.27 12.3 2.2 1 23 172 195 172 195 0.96

4 24 0.29 21 6.4 7.5 1 23 201 224 201 224 0.96

5 24 0.057 4.2 8.6 1.1 1 23 238 260 238 260 0.98

6 24 5.3e-05 0.0038 18.1 1.3 1 23 264 286 264 286 0.98

7 24 0.2 15 6.9 1.1 1 23 320 342 320 342 0.98

8 24 0.0023 0.17 13.0 0.2 1 23 348 371 348 371 0.97

9 24 1.9e-05 0.0013 19.6 0.6 1 23 435 457 435 457 0.97

10 24 0.0058 0.42 11.7 1.8 1 23 463 486 463 486 0.95

11 24 0.0096 0.7 11.0 5.3 1 23 499 521 499 521 0.98

12 24 0.044 3.2 8.9 1.0 1 23 529 551 529 551 0.98

13 24 0.41 30 5.9 3.1 1 23 563 586 563 586 0.97

14 24 0.079 5.7 8.1 3.2 1 23 716 739 716 739 0.97

15 24 0.065 4.7 8.4 1.0 1 21 746 766 746 767 0.94

16 24 0.00053 0.038 15.0 3.6 1 23 799 821 799 821 0.98

17 24 0.0016 0.11 13.5 0.6 1 23 826 848 826 848 0.97

18 24 0.043 3.1 9.0 1.1 1 23 854 877 854 877 0.94

19 24 0.086 6.2 8.0 0.6 1 23 887 910 887 910 0.95

20 24 0.0036 0.26 12.4 0.4 1 23 1007 1029 1007 1029 0.98

21 24 0.28 20 6.4 1.5 1 23 1048 1071 1048 1071 0.93

22 24 0.044 3.2 9.0 0.6 1 23 1092 1115 1092 1115 0.95

23 24 3.8 2.7e+02 2.9 2.5 1 23 1130 1153 1130 1153 0.86

24 24 0.064 4.7 8.4 1.9 1 23 1167 1190 1167 1190 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.062	4.5	8.5	0.2	2	23	105	125	104	125	0.96
2	24	0.0061	0.45	11.6	2.3	1	23	131	154	131	154	0.97
3	24	0.0037	0.27	12.3	2.2	1	23	172	195	172	195	0.96
4	24	0.29	21	6.4	7.5	1	23	201	224	201	224	0.96
5	24	0.057	4.2	8.6	1.1	1	23	238	260	238	260	0.98
6	24	5.3e-05	0.0038	18.1	1.3	1	23	264	286	264	286	0.98
7	24	0.2	15	6.9	1.1	1	23	320	342	320	342	0.98
8	24	0.0023	0.17	13.0	0.2	1	23	348	371	348	371	0.97
9	24	1.9e-05	0.0013	19.6	0.6	1	23	435	457	435	457	0.97
10	24	0.0058	0.42	11.7	1.8	1	23	463	486	463	486	0.95
11	24	0.0096	0.7	11.0	5.3	1	23	499	521	499	521	0.98
12	24	0.044	3.2	8.9	1.0	1	23	529	551	529	551	0.98
13	24	0.41	30	5.9	3.1	1	23	563	586	563	586	0.97
14	24	0.079	5.7	8.1	3.2	1	23	716	739	716	739	0.97
15	24	0.065	4.7	8.4	1.0	1	21	746	766	746	767	0.94
16	24	0.00053	0.038	15.0	3.6	1	23	799	821	799	821	0.98
17	24	0.0016	0.11	13.5	0.6	1	23	826	848	826	848	0.97
18	24	0.043	3.1	9.0	1.1	1	23	854	877	854	877	0.94
19	24	0.086	6.2	8.0	0.6	1	23	887	910	887	910	0.95
20	24	0.0036	0.26	12.4	0.4	1	23	1007	1029	1007	1029	0.98
21	24	0.28	20	6.4	1.5	1	23	1048	1071	1048	1071	0.93
22	24	0.044	3.2	9.0	0.6	1	23	1092	1115	1092	1115	0.95
23	24	3.8	2.7e+02	2.9	2.5	1	23	1130	1153	1130	1153	0.86
24	24	0.064	4.7	8.4	1.9	1	23	1167	1190	1167	1190	0.96

Sequence Information

Coding Sequence: ATGTCTGCTTCGGAAAATGATCCCACGTTCGCTCGCGTCTGGGTAAAGGACGAGCCGGATGAAAATATCGCAGATGAGATTGATGGCATAGCCAGTGATCATCATGAAGACGACAATGACCTGGACAATGATGATGATGATGATGACGATGAATATACAGAGACAGCGCATGTGGACATTGATCCTATGGGTATTGTGAAGAATGAAACGCAAACTTCAGAAACAGAAGAACAGGATGATCACTGGAAGACAATTAAAGTCAAAGAGAAATGGGTGACGAAAACGGGTTCGGAGCGTGAAGTAGAGAAGCTAAAGTGTCCGTTTTGCCCTTACGAAGGCAAGCCCAAATTGCTCAAAGCGCATATCAGGAAACACACAAACAAAAAGGAGTTCAAGTGTCCATTTTGTAGTTTCAACACGAACTACAATACGGCGTTGCGGAGGCATCTGAAGATTAAGCATTCGGGCGATAGTGACGATGAAAAAAAGGTGAAGAAGGTCCACATGAAGAAATTCCAGTGCGCCCTCTGCCCCTACGTGACAGCCCACAGGCACGGGCTGAAGAGTCATATGAAGGGGAAGCACCAGGACGAGAAGCCTCACCAGTGCAGCTTCTGCGATTACAAGACGAAGTACTCCACGGCGCTGCATCGGCATCGCTTCACGCAGCACAAGAACGAGGTGAAAGAATTGGGCGAAGCTTCCAGAGAGTTCAAATGCAGCAGCTGCGACTTCGTAGCCTTCCTCAACTCCGAGCTCAGACAGCATGAAAGGAAACACGTCCTGAAATTCCGCTGCAAACAGTGCGGCTACAAAACTGACACAGAGGAAGATCTGCAACAGCATATGATGAAACATGACGATCCTAATTTCAAAGCTTTTAAATTCAAAATGCCTTCAGTAAAGAAAGAAGCCGTGGTGACATCCCAACTTGGCGGCAACAGCACTGACCCAATATTCAAGTGCAAGATATGCGAACATGAATCTATAACCTACGTGGCGTTCTTAGAACACGTTAAATCTCATGAAAAGGTTGATCCGTACAAGTGCAATGTGTGCGGATATGAAACTGCGTCCAATACCACGTTCCTGGAGCATTTGCAGATAGAGCACGGAGTCACGGAGGATGGTATGAATGACGTCAAGGTCATTAATGAAGGAATCATGAGTGCGATGCAAGCTATTTCTATGGGCGTGACCCCAGACTCTGACGACGAGCCGCTAGCTTCCCTCCCCTTCCGCGACGACTCGGACGAAGAGCCGAAGGCCAAACCGAAGAGGAAACGCCTCCTTAACAAGACCTTCGCCTGCGAAGTCTGCCCGTATTCCACAAAGTACAAAGACGCTCTCAAGTCCCACATGCGAAAGCACACCGAAGGTAAACCGTACAAGTGCACCCTCTGCGATTACTCCAGCAAGTATCCCACCGCGATGCGCAGGCATAAGATGCTAAAACACCCGGAGAGCTTCTCGTCCGCTTCCAAACCGAAGGAGTACGTTTGCCACGAGTGCAGTTACAGAACTTACTACAAAGCCAACCTGTTCCAGCACTTCAGGAAACACAATCCGGACAAGGCTAAACAGTTCAAGTGCGAGTCCTGTCCGTTCGCTACGGCGTACCAGACGGCCTTTTACAGGCATCGTAAGATACACAAGCGTAAGTTAGCGAACGGTCAGATCATCACGCACCAGTGTGACATGTGTCCGTATTCAACGCAGCACGAGGGCCGGTTCTCTTGGCACATGCTGAAAACTCACAACAAAAGGGGCGTTTTCGAGAAGGGAATCAAGTGCGATTACTGTGACTTCGAGACGTACAAGAAACTGAAGTTCCGGCTCACGGCGCACCTTCAGAGGAGCAAGCAAATGATGCCGATGAAGTGTCTACACTGCGATTTCGAGACCTACTACAAATGTCAGGTGAGATTCCACAGGAAAACTCACTACCCGGTGTTGCAGAGTATAACTCGGGTGCCCAAAACTGAGGATGCCAGTCAGAATGCTAACCCGCCTGAGAACGTGGAAGCTCCAGCGCCGAGCCTCAATCTCATACTAGGGCATTGCAAAGAGGACAATTATGAAGTAGACTCCGCTATAGCGTGGAAGAAGATTCCCGTCTTAGAGAACAGAAGTCTTAACAAACCGTTCTCCTGTTACAAGTGCTCGTACGCCTCACGCTTCAAGTCGTCAGTCCAACGGCATTACCAGCGTCTCCACGGCAATAAAGCCAAACCATACCGCTGCAGCCATTGTGACTTTGGCACTTCAACAAAAGACTCCATCGCGCTGCACACTAAGCGGAGCAAACAGAATAATGCAATGGAATGCGAGTGCGGTCAATTCGCAACATTCTACAAATGCGAGTTTGTCGTTCACCAGAAACTGCACAACCCTTACCGTTGTAGCAAATGCACTTACTCTTCCAAGTCCAAATACGATTTGGAGCGTCATTACACGATGCACAGTAACAAAGGGTACAAGTGTGAACACTGCGATTACGTCGCGGCGCGGCGCGACACTTTATCGACTCACGCTGTGACCCATACCGGCATAAAGCCTTACCAGTGCCATCTGTGCCCTTACGGCACTATGAGGCTGACGTTCTTAGAGAAACACATTATTGATAAACACGACGGCGATGCCTCAAAGACTAAACCTTTCCAATGCCACTTGTGTCCGTACGGATCGTTCAGACAAGGCGTTTTGGACAGGCATATCCTTCAAGAGCACGCGGAGACGAACGATGTGGCCGTGGATGATTGCAACGATAATGTTCAGAATGACGATGCTCAGAATAACGACACGCACAATGACAGTGCACAGAATGACGACACGCATAACGACGACGACTCCATCGGTAACGTCGTTGACACACAAACCCCGACCCTAAACACAAGTTACTACGATCTATCGACGCGCAATAATATCACGATAGAAAGCCCAGCCGTTGCCAACGCGAACGATAGTCAGTATCCGACCCCGACGGAGAAACTAACGCAAGAAAAAGGCGTGAAACCATTCCAGTGTACCGTGTGCCCTTACAGCGCTTTCAGTCCGAAAGTCTTGAAGAAACATATGACCATACACACGGATGTTCGCGTGGATAGCATAGACGAAGCCGCCGACGCGACAGTCAAGCCATTCCAATGCCATCTGTGTCCTTACAGCTCATTCCGCCCCAACATTCTGAAGAACCATCTGATTCTAAAACACTCCATAACACCCCCAGCGGGATTCGTCGACGAGTACAACACTAAAACAACCGAGAAGACCTACCAGTGTCACATTTGCCCGTACAGTTCCATGAGCATCAACGTCCTGAACAAACACTTGGCGATAAAACACGAGACCACGGCAGCAACCGCTCTTGAGAATACAGTCAAGACATTCCAGTGTCACCACTGCCCTTTCAACTCCTTGAACCCCAACGTTTTGAAAAAGCACGTGATACAGTCACACTCGGGGAGGTCGGAGGTCCAGACCGAAGGCGCCAAGCCATTCCGATGCCAGTTCTGTCCGTACAGCTCCTTCAGTCCGAAGGTTTTGAGGAAGCATCTGATGCAGAAGCACTCTGGCCTTCCGAGATCTGCGTTCGAAACTTACAGTGACAATTCGGTGGAAGTCGTGAGCGTTGCTTCCGAAAATGACTGA
Protein Sequence: MSASENDPTFARVWVKDEPDENIADEIDGIASDHHEDDNDLDNDDDDDDDEYTETAHVDIDPMGIVKNETQTSETEEQDDHWKTIKVKEKWVTKTGSEREVEKLKCPFCPYEGKPKLLKAHIRKHTNKKEFKCPFCSFNTNYNTALRRHLKIKHSGDSDDEKKVKKVHMKKFQCALCPYVTAHRHGLKSHMKGKHQDEKPHQCSFCDYKTKYSTALHRHRFTQHKNEVKELGEASREFKCSSCDFVAFLNSELRQHERKHVLKFRCKQCGYKTDTEEDLQQHMMKHDDPNFKAFKFKMPSVKKEAVVTSQLGGNSTDPIFKCKICEHESITYVAFLEHVKSHEKVDPYKCNVCGYETASNTTFLEHLQIEHGVTEDGMNDVKVINEGIMSAMQAISMGVTPDSDDEPLASLPFRDDSDEEPKAKPKRKRLLNKTFACEVCPYSTKYKDALKSHMRKHTEGKPYKCTLCDYSSKYPTAMRRHKMLKHPESFSSASKPKEYVCHECSYRTYYKANLFQHFRKHNPDKAKQFKCESCPFATAYQTAFYRHRKIHKRKLANGQIITHQCDMCPYSTQHEGRFSWHMLKTHNKRGVFEKGIKCDYCDFETYKKLKFRLTAHLQRSKQMMPMKCLHCDFETYYKCQVRFHRKTHYPVLQSITRVPKTEDASQNANPPENVEAPAPSLNLILGHCKEDNYEVDSAIAWKKIPVLENRSLNKPFSCYKCSYASRFKSSVQRHYQRLHGNKAKPYRCSHCDFGTSTKDSIALHTKRSKQNNAMECECGQFATFYKCEFVVHQKLHNPYRCSKCTYSSKSKYDLERHYTMHSNKGYKCEHCDYVAARRDTLSTHAVTHTGIKPYQCHLCPYGTMRLTFLEKHIIDKHDGDASKTKPFQCHLCPYGSFRQGVLDRHILQEHAETNDVAVDDCNDNVQNDDAQNNDTHNDSAQNDDTHNDDDSIGNVVDTQTPTLNTSYYDLSTRNNITIESPAVANANDSQYPTPTEKLTQEKGVKPFQCTVCPYSAFSPKVLKKHMTIHTDVRVDSIDEAADATVKPFQCHLCPYSSFRPNILKNHLILKHSITPPAGFVDEYNTKTTEKTYQCHICPYSSMSINVLNKHLAIKHETTAATALENTVKTFQCHHCPFNSLNPNVLKKHVIQSHSGRSEVQTEGAKPFRCQFCPYSSFSPKVLRKHLMQKHSGLPRSAFETYSDNSVEVVSVASEND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01546028;
90% Identity: iTF_01545143;
80% Identity: -