Yror009032.1
Basic Information
- Insect
- Yponomeuta rorrellus
- Gene Symbol
- -
- Assembly
- GCA_947308005.1
- Location
- OX370995.1:3347902-3349724[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-09 3.7e-06 27.1 0.1 4 35 34 66 31 71 0.92
Sequence Information
- Coding Sequence
- ATGGAGAATTCGCACGCCTGGCTCGGAGCATCCACGTCTTCAATAGCAGAGCACCACGGTCAGACCCTCAAGCTGAAGGCGCCCACTTGGAGCCAAAAGCAACTGCAGGAAGCCATCCAAGCCGTGGTCACGCAACGCATGCGCTTCACCCAAGCCGCCACCCACTACGCCATCCCTAAAGGCACACTCTACGACAACATACTTGGAAAGTCCAAGCGGATGCTAGTGTTAGACGAAGCTGGAATGACGGCGAGCGAGGAGAGAGCGGTTCTAGAGTACTGCTGCGAGACGAGCGTGTCGCCGTATAATAGAAGGACGAAAAAGTCGCTGGCGGAGGTTTTGAGATTCGTGGGCAAGTTGAAGAGGAACAGAGACCCAGAGTTTACCCTCACAGGGCTAACAGGCTTTCGCTGGTGGTGGGCCTTTTGCAAGAAGCACTCGATAGTGTCGCTTTATTATGCAGACAACGGTCGAGGGCAGTTGGAGATGGACGATAGTCGTGATGTGATGGACGCGTGA
- Protein Sequence
- MENSHAWLGASTSSIAEHHGQTLKLKAPTWSQKQLQEAIQAVVTQRMRFTQAATHYAIPKGTLYDNILGKSKRMLVLDEAGMTASEERAVLEYCCETSVSPYNRRTKKSLAEVLRFVGKLKRNRDPEFTLTGLTGFRWWWAFCKKHSIVSLYYADNGRGQLEMDDSRDVMDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025190;
- 90% Identity
- iTF_01543855;
- 80% Identity
- -