Basic Information

Insect: Yponomeuta plumbellus
Gene Symbol: -
Assembly: GCA_947310845.1
Location: OX371220.1:3950468-3968973[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.25 24 6.5 0.6 2 23 323 344 322 344 0.96

2 8 0.0097 0.9 11.0 0.8 1 23 348 371 348 371 0.87

3 8 0.21 19 6.8 1.2 1 23 378 400 378 400 0.98

4 8 0.0012 0.11 13.8 1.0 2 23 405 427 404 427 0.90

5 8 2.9e-05 0.0027 18.9 1.5 1 23 434 457 434 457 0.97

6 8 0.00012 0.011 17.0 0.2 1 23 529 552 529 552 0.92

7 8 4.6e-05 0.0042 18.3 1.0 1 19 558 576 558 581 0.95

8 8 0.21 19 6.8 0.3 3 12 592 601 591 604 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.25	24	6.5	0.6	2	23	323	344	322	344	0.96
2	8	0.0097	0.9	11.0	0.8	1	23	348	371	348	371	0.87
3	8	0.21	19	6.8	1.2	1	23	378	400	378	400	0.98
4	8	0.0012	0.11	13.8	1.0	2	23	405	427	404	427	0.90
5	8	2.9e-05	0.0027	18.9	1.5	1	23	434	457	434	457	0.97
6	8	0.00012	0.011	17.0	0.2	1	23	529	552	529	552	0.92
7	8	4.6e-05	0.0042	18.3	1.0	1	19	558	576	558	581	0.95
8	8	0.21	19	6.8	0.3	3	12	592	601	591	604	0.86

Sequence Information

Coding Sequence: ATGTCTGGGTTCCTCTCGCTGAACCTACAAGACTTCGGTCTCGGCGATGACATAACAGAAACAGTAAAATCATCGCCTTTACACTGTATCTGTTGTCTTGATAAACACGCCGCATTTATAAAGCTTGTAAACTGTAAACATGCTGGCTACTTAGAGAACTTGCTGACGCCTGAGGTAGTGCTATCAGAACATGTGATATGTGACAACTGTCATAGATTCCTGAAGAGGATTGAGTGCTTCAGGGCACAAGTGGAGGCGAGCTGGAGGATTCTGAACACTCAGTCTCAACTCACCTACCAGTTCGCCAAGCCGACCAACCTAAACCAGACCGAGACACAGACCGTAGAAATCGAACAGGACCTGAAACTACTCAGAAATCATGTCTCCGATCTCACCCCTAACCTAGACATCACGTTTGAGCCTGAAGACTTAACGCCTCTGAAATACCTTCAAAGCAAAGAGCCAGTGCTGTCTACCCTAACTCCAGTACCAACTATCCAAATCGAACCAACGGTGTCACAAAAACCCGCTTCAAGCTACAAAAAAAGGTCTAATGCTGAGTTTGAAGACGATTTGGACGGTCTCAAGAAGGATATCCCTCCGGCAAATATATCTGAGCCGATTATAACGATCCACGAGGAACCAGAGACTAGTAAACTGTTCACGAGTTTGAACGAGAATGTTGCTGCTAAGGAGGACCGTTTGGTGGGGAGTGCTGTTGCAAAAGAAGCTCCCTCGAAGCCCCGTAAGCAGACCAAGGAGCCTATGTACAAGAGGTTTGCGGGCAAGCTCCGGATGGTCCTCCTCACTGAAGAGGAGATGCGCCTTGAGAGGGAACGGGACTGCAACAGCGAGGCTTACCTCAAGTTTCCCTACAAATGTGTGACCTGCATTGTAGGCTTCGACCACGAGTTGAACCACGAGGGCCACGTCAAGAGTCGACATTCCGCGAGTCAACAAGGGTCTACGTGTAATATATGTAAATCTGTTTTGTCGGCCGGCAGCTCCTATAGGAAACACGTCAAGAGTCATTATACTCGATACGACTGTGAGGAGTGCGGCAAGCGATACAAGAATTTGTACTCGTCCCTTCAGCACTACAACGCGAGCCACGGCACTGTCGGAGTCACTTACCGCTGTCAGCAGTGCGACTTTACCACCGAAATGATAAGCGCGTACGCATACCACCGGAATAAACACATGAAGAATCTGCAGTGCAGCGAGTGTGGGAAACTTTGCACTAGCATGGCGAATCTGAAGACCCATCTGTTCGCAGTCCACAAGCAGTCCAACCGCACGTACTCGTGCGCGGACTGCGACAAGCGGTATACCAATAAGTCGGGCTGGCAACACCACCGCGACACGGCGCACGCGCACGCGCACGGCGCCGGCGCCGGCGCATACTGCGCGGACTGCCGCGTGCAGTTCAACTCCGTTAGTGTTATAATAGGTCGGGCTGGCAACACCACAGCGCCGCTCGTCGCAGGCTTCGGCGCGGACTGCCGCGTGCAGTTCAACTCCGTTAGATGCTACAAGGCTCATCTCAGGCTGAACTCCAAGCACGTGGCTGATGTGGACAAGAAGTACGTGTGCTCGAAATGCGGGGCCCGCTTCGTTACCAGCACTTCCATGAAGCGGCACGTCGACTGGGTGCACCTGAAGGTGTTCCAGCATCAGTGTGGAGACTGCAGCGAGTCGTTCCGGACGCGTTCCCTTCTCAAGCGCCATGATGACATGGTGCACAGGAAACTGCCTCCAGCGCGTGACAAGATATGCGATTACTGCGGCAAAGGATTCACTGTAAGTGCAAAAGGTTATTTGACCGATTTCTGA
Protein Sequence: MSGFLSLNLQDFGLGDDITETVKSSPLHCICCLDKHAAFIKLVNCKHAGYLENLLTPEVVLSEHVICDNCHRFLKRIECFRAQVEASWRILNTQSQLTYQFAKPTNLNQTETQTVEIEQDLKLLRNHVSDLTPNLDITFEPEDLTPLKYLQSKEPVLSTLTPVPTIQIEPTVSQKPASSYKKRSNAEFEDDLDGLKKDIPPANISEPIITIHEEPETSKLFTSLNENVAAKEDRLVGSAVAKEAPSKPRKQTKEPMYKRFAGKLRMVLLTEEEMRLERERDCNSEAYLKFPYKCVTCIVGFDHELNHEGHVKSRHSASQQGSTCNICKSVLSAGSSYRKHVKSHYTRYDCEECGKRYKNLYSSLQHYNASHGTVGVTYRCQQCDFTTEMISAYAYHRNKHMKNLQCSECGKLCTSMANLKTHLFAVHKQSNRTYSCADCDKRYTNKSGWQHHRDTAHAHAHGAGAGAYCADCRVQFNSVSVIIGRAGNTTAPLVAGFGADCRVQFNSVRCYKAHLRLNSKHVADVDKKYVCSKCGARFVTSTSMKRHVDWVHLKVFQHQCGDCSESFRTRSLLKRHDDMVHRKLPPARDKICDYCGKGFTVSAKGYLTDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543312; iTF_01544336; iTF_01546994; iTF_01545236;
90% Identity: -
80% Identity: -