Basic Information

Insect: Yponomeuta plumbellus
Gene Symbol: L
Assembly: GCA_947310845.1
Location: OX371193.1:11707302-11719638[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.58 54 5.4 5.8 1 23 3 25 3 25 0.97

2 16 7.8e-06 0.00072 20.7 4.1 1 23 31 53 31 53 0.99

3 16 2.4e-05 0.0022 19.2 0.1 1 23 59 81 59 81 0.98

4 16 0.0001 0.0095 17.2 0.1 2 23 95 117 94 117 0.96

5 16 3.5 3.3e+02 2.9 0.1 9 23 148 163 144 163 0.93

6 16 0.26 24 6.5 0.1 3 23 219 239 218 239 0.97

7 16 0.01 0.92 10.9 0.0 2 23 254 275 253 275 0.93

8 16 5.9e-05 0.0055 17.9 0.6 1 23 283 306 283 306 0.94

9 16 0.03 2.8 9.4 0.1 1 23 311 334 311 334 0.92

10 16 0.018 1.7 10.1 0.0 1 23 395 420 395 420 0.94

11 16 0.00064 0.06 14.7 0.0 2 23 472 493 471 493 0.96

12 16 0.053 4.9 8.6 0.0 1 23 501 523 501 523 0.98

13 16 1.7 1.6e+02 3.9 0.7 2 23 531 552 530 553 0.93

14 16 1.2 1.1e+02 4.4 0.6 1 23 631 653 631 653 0.94

15 16 0.0041 0.38 12.1 0.2 1 20 661 680 661 683 0.95

16 16 0.14 13 7.3 0.3 1 23 690 712 690 712 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.58	54	5.4	5.8	1	23	3	25	3	25	0.97
2	16	7.8e-06	0.00072	20.7	4.1	1	23	31	53	31	53	0.99
3	16	2.4e-05	0.0022	19.2	0.1	1	23	59	81	59	81	0.98
4	16	0.0001	0.0095	17.2	0.1	2	23	95	117	94	117	0.96
5	16	3.5	3.3e+02	2.9	0.1	9	23	148	163	144	163	0.93
6	16	0.26	24	6.5	0.1	3	23	219	239	218	239	0.97
7	16	0.01	0.92	10.9	0.0	2	23	254	275	253	275	0.93
8	16	5.9e-05	0.0055	17.9	0.6	1	23	283	306	283	306	0.94
9	16	0.03	2.8	9.4	0.1	1	23	311	334	311	334	0.92
10	16	0.018	1.7	10.1	0.0	1	23	395	420	395	420	0.94
11	16	0.00064	0.06	14.7	0.0	2	23	472	493	471	493	0.96
12	16	0.053	4.9	8.6	0.0	1	23	501	523	501	523	0.98
13	16	1.7	1.6e+02	3.9	0.7	2	23	531	552	530	553	0.93
14	16	1.2	1.1e+02	4.4	0.6	1	23	631	653	631	653	0.94
15	16	0.0041	0.38	12.1	0.2	1	20	661	680	661	683	0.95
16	16	0.14	13	7.3	0.3	1	23	690	712	690	712	0.94

Sequence Information

Coding Sequence: ATGCCGTTTCGTTGCGAGTTCTGCTCGCGCCTGTTCAAGCACAAGCGCTCCCGAGACCGGCATGTGAAGCTGCATACAGGGGACCGAAAGTACCGTTGCGCGCACTGCGAGTCCGCCTTCTCAAGGAGTGATCACCTGAAGATCCACATGAAGACACATGACAATCAGAAGCCATTCCAATGCACTGTGTGCAACCGCGGCTACAATACAGCGGCTGCGCTGACGTCACACATGCAGGGTCACAAGAGGGACCGGGCGGAGCCCGAGCGGCGGCGGGCGCTGCGATGCCTGCGCTGCGGTGACGCCTTTCGGAGACCCGACCTCTTACAGGCTCACATGATGACAGCGCACGGCGTTGACTCGGCGACCCTGACCCCACCCCGACGGGTCGCTTCCCAACCGCCTCCAACACTACTGGCTTGCATTTACTGCACTCGCGACACGTTCACCAGCATGGACCAACTTCAACTACACGTTAGAGCAGTCCACTCGGCACTGATCAATGGAGATGCTCATTCGGAGACGTCAGCTCCCCAACCAGTGCCAACTGATCTCAGCAGAAAAGGCCAAGAGGAGGCTTCTACTCCAAAGCGTCCCAGAACGGACTCTGGACCAGGAACTCCGCAACTTGCGCTATCTCCTAGTACACTTTTGTGTAACCAATGCGACGCAGCGTTGCCAGACTTTGAGTCCTTCCGAGTACATCTAAAAGGACATTTGGAGGAGGCCGGCGGAGAGTTGGGTCGGGCCAGTCCCACGCCTTGTCCGCATTGTGGAGCTACGTTTGCTGAAGCGGCGGCAGCGGAGCGTCACCTGGCAGCGCATTACTTGGCAGCTTCGTGTGAATACACTTGTCACAGTTGTGCTCGAAGCTTCCCGTCACCTGATGATCTGCAGAAGCACTTGCTGGACTTGCACGCGCACCACCTCTACCGCTGCTCCCTTTGCAAGGAGATCTTCGACTCTAAAGTGGCGATTCAGGTCCACTTCGCGGTGGCTCACAGCGGCGAGAGCAAGGTGTGGATCTGCCGCGCGTGCGGGCCGGGGCAGGGCGCGGCGCTCCGCTCCGAGGCGGAGGGCGCGGCCCACGTGCGCTCGCGGCACGCGGCCCGCCGCTGCGCGTGCGGCGCCGTGCTGGCCGGGGAGCGTGCGCTGCGGGCGCACGCCGCCGCGCACGCGCACTACCGGTGCCCCGCGCCCGCCTGCCCCGACACCTTCGCCGTCCAGTACCTCCTCGAGAGGCACATGCAGGCGCAGCATGCTACGACACCGGGTGTCAACGGCGAGTCCGTGCGAGCGAAGCGGCTTGACAACAACAACGCCCCGGAAGCCAGCGTAGACGGCGCGTGCTCGCCGTGCACGACCGGATCGGCTACCGAGGAGCGGCGTCGCAAGAACGGAGCGGTCGCTCTCCAGTGCGCCTACTGCGGCGAGCGAGCCCGCACAAGGGCCGAGCTCGAGGCGCACACGCGCGCACATTCGGGCGCTGCCGCCGCTAGACACAAGTGCCTCATTTGCGACGAGGTCCTGCCCTCGGCTGCTGTGCTGGCCGAGCATAAATTGACGCATTGCAAGGTCGTGGCAGGAGACACCTGCGCCCGCTGCCGTGCTCGATTGCCGTCCGAAGAATCTTTCCTGAGTCACATGGCTCGGCACCACCCCGCGCTGCCGGCACCATGCGTCGTCTGCAGACAAACGCTTGCATCCGAAGCCGAGGCAAGGCTCCACGCCCGATTTCATCTTAGAACGTCTGGCGACGAGAAGAGATGTGCAATCTGTCTGAGAGCTCTCCCAGAGGGTGAGACCGGCGGCGAAGGCGCTCGTGCTTGCTCGTCGTGCTACGCGCGTCATGCAGCTCCAACTGTTCCGAGGCCGCCACTTCCGACAGAACATGATTGTCGCTTGTGCCGTCGAGCTCTCGGATCACCGACGCGCTTGCAGACTCATCTCATCGAGCATACGTTCGCGGGCATCGGGGCATTCACTTGCTACTTGTGCTCCGCTGTGTTCACAAGCGCGAACGGATTGCAGCGCCATCTCCCTGAGCACGCGGCAGCTCCGCGGCCATACGACTGTGCTCGCTGCGGATTGAAATTTTTCTTCCGCGCTGAACTGGACAACCACGCGTTCGTACATCTCGAAGAAGCTGAGATAGCCCAGCGGGCTTTCTACGAGGCCTACGCGAGAGGTGCGGCGTGGGCGGCTATGGCTCCGCAAGAACCACCGCCGGTTGCAACACCAGCCCCCCCTGTTGAAGCTCCGATTAAGAATGAACCAGAGATTAAAGAAGAGAGGAACAATGACGAGTACATCGAAGTGTCGTCGCCACCACCCCCCTTGCCACCGCCGCCAGCCCCCTCTCCTCCGCCCGTGGTAAAACAAGAGAAGCCTGATGAAGACTGA
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDRAEPERRRALRCLRCGDAFRRPDLLQAHMMTAHGVDSATLTPPRRVASQPPPTLLACIYCTRDTFTSMDQLQLHVRAVHSALINGDAHSETSAPQPVPTDLSRKGQEEASTPKRPRTDSGPGTPQLALSPSTLLCNQCDAALPDFESFRVHLKGHLEEAGGELGRASPTPCPHCGATFAEAAAAERHLAAHYLAASCEYTCHSCARSFPSPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGESKVWICRACGPGQGAALRSEAEGAAHVRSRHAARRCACGAVLAGERALRAHAAAHAHYRCPAPACPDTFAVQYLLERHMQAQHATTPGVNGESVRAKRLDNNNAPEASVDGACSPCTTGSATEERRRKNGAVALQCAYCGERARTRAELEAHTRAHSGAAAARHKCLICDEVLPSAAVLAEHKLTHCKVVAGDTCARCRARLPSEESFLSHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRTSGDEKRCAICLRALPEGETGGEGARACSSCYARHAAPTVPRPPLPTEHDCRLCRRALGSPTRLQTHLIEHTFAGIGAFTCYLCSAVFTSANGLQRHLPEHAAAPRPYDCARCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAAWAAMAPQEPPPVATPAPPVEAPIKNEPEIKEERNNDEYIEVSSPPPPLPPPPAPSPPPVVKQEKPDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545077;
90% Identity: iTF_01545077;
80% Identity: -