Yplu018392.2
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- -
- Assembly
- GCA_947310845.1
- Location
- OX371199.1:17019656-17029847[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.013 1.2 10.6 1.0 3 23 603 624 602 624 0.96 2 24 4.4 4.1e+02 2.6 1.1 4 23 993 1014 991 1014 0.84 3 24 0.038 3.5 9.1 0.3 1 21 1019 1039 1019 1040 0.96 4 24 4.6 4.3e+02 2.5 0.3 1 23 1082 1105 1082 1105 0.84 5 24 0.18 16 7.0 0.8 3 21 1116 1134 1114 1135 0.93 6 24 0.92 86 4.7 0.1 2 23 1143 1165 1142 1165 0.89 7 24 0.0047 0.43 12.0 0.3 3 23 1185 1206 1183 1206 0.96 8 24 0.05 4.6 8.7 1.1 1 23 1212 1235 1212 1235 0.95 9 24 0.13 12 7.4 0.0 1 23 1260 1283 1260 1283 0.90 10 24 0.02 1.8 10.0 3.4 1 23 1288 1310 1288 1310 0.97 11 24 0.3 28 6.3 0.1 1 23 1316 1339 1316 1339 0.95 12 24 0.0024 0.22 12.9 1.3 1 23 1352 1374 1352 1374 0.97 13 24 0.00019 0.017 16.3 1.8 1 23 1422 1445 1422 1445 0.97 14 24 0.0051 0.47 11.8 1.9 1 23 1510 1533 1510 1533 0.96 15 24 0.0035 0.33 12.3 1.5 2 23 1566 1588 1565 1588 0.95 16 24 0.16 14 7.2 0.0 2 23 1594 1616 1593 1616 0.95 17 24 0.084 7.8 8.0 0.1 1 21 1660 1680 1660 1681 0.94 18 24 0.00049 0.045 15.0 0.6 1 23 1691 1713 1691 1713 0.94 19 24 0.00012 0.011 17.0 0.3 2 23 1802 1824 1802 1824 0.93 20 24 1.5e-07 1.4e-05 26.1 1.3 3 23 1831 1851 1830 1851 0.98 21 24 0.32 29 6.2 0.2 3 23 1871 1891 1869 1892 0.93 22 24 0.13 12 7.4 0.0 1 23 1914 1936 1914 1936 0.97 23 24 0.0054 0.5 11.8 0.4 1 23 1942 1965 1942 1965 0.95 24 24 0.00027 0.025 15.8 0.4 1 23 1974 1997 1974 1997 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCGTACCACCAGTTCCGACGGCACGGAACCTCCCGTCCTGGCATCAAAAATCAAGGATTGTGTGGCTGTCCAGATAAACGAGAATGACGAGCTGCCAACGCGTGTCTGTAGGAAATGCATGGACAAGGTGAATAACTGGCACATATTTAAGAAAGTGTGTGAGAGGTCCCAAAACAAACTTCAATCTTTGGCAAAAAAAGATGGCAGCCAACTAGAAGAGGTCAAAATAAAAAGTGAACCCCTGAACGATGAGCTTTATGATGATGGAGTGGTCATTGATGCCTCATATCCAGGTCTGGAGCAGAATGCCACTTCGTCAAGCAAACTCCAGCCAGAAGGCCCTCCAATCTTGGCATCACTGGGGCTTACACCGAGGAGTGATAAGAACTGTGTGGATCCACGAATGGATTGGCATCGGGTCCATGCTATACTGGACATGGTTCAAGACGATGAGGTCATTGATACCCTGCAGAGTTTCGAGGAATGTGATGTTCTACATAAATCTGAACATGGGTCTGATACAGAAATAGAACTACTGTCTGATATTGATGATGAATTTATTGACTGCAAAATTGGTTACAAAGCCAGAGACAAAACCATCCTGTCTAAAGATCCAAAAATATCCAATTCTGATACGAAATCTAAAATGAAACAATCATCTGCATTACTTGGCAAAAAATTCAAAAGTGTTAATGCAAAACACTTTCCTCAACCTCTTGATGCTTGGCAGTGTTTTTTTAGTGATGATATTTTAGAGCTTATTGTTGAATCCACTAATGCAATTATTATCAAAAGAGGACTTGAAGTTTCTTCCAACACCACCATACAAGAAATCAAAGCTTTCTTTGGAATCCTATATCTCCATGGGATCACAAGACCAATGTACCAAAAACGAAGTGAGCTTTGGAATGAAAAATATGGAGTAGCAGGAATAAAGCATACCATGAGCCATGACCGATTTAAGTTCCTGCTTGGTAATCTATATTTTGATGTTGAAGATGATGATGAGAGTATGCCACAGTTTGACACCATGAAGCGTATGCGAAAAATATTTGAAATCTTTGCGATGAACTGTAGAACAATGCATGACATTGAGAATGTTGCAGTAATTGATGAGGTCATTGTGCCAGTCTATGGACCATGTCCATTCCGATATGACATTGATAAGAAGCAGTTGAAGAAAGGCATTAAATTAGTATTGCTTGTGGATCCAAATAGTTTCTTCATCAGTAACTTGGATGTGATTATCGATGCATATTTTGGCCCAGACGAGATTGCGAAGAAGTTGGTACAACATCTAGCTGGTACCGGAAAAACTATTGTTATGGACAGTTGGTACACAACAGTCAGTTTAATGGAAACACTCAAAACGGAATATCAGCTGTACAGCATTGCAGCATTAAGTAGTGACAGTGAGGTCATACCTCCAGTTTTCCTGTCAAACCTGAGAAAATCAGGAGCATTAATGACCGGCTTTCTTGATCGAGACACATCTTTGTCTTCTTATGTAAACAGTGCATCAAAGTCTGTCAATGTTTTGACCAACCATCCAAAGTATTACAAGAGAGGTCATGGCGTCGAGAGCGAGAAGGAAGAGATGGATGACGAGGAGGAGGTAAACGAGTCCAAACAATATGAGAAAGTTCCCAACATTCCCGAGGTATCTATTACCGTCATGCGTCCTACCGGGGAAACCCTGCAACCGCGTCAGGGATTTCAACAACTAGCCTCTAAGAATTGCCTCATTTGCGACCGCGCGTACCGGTACTCGCACAATGCTCGCCGCCATGAGCTGACCGCTCATAGCTTCGATCGGTACACAAACAAAGTGACAAATAAAAAACACCCACTTGCACATATGCAGCCTAAACTGCGCCCCAACCCGTTCAATCCTAAAGCGCGTCTTATGCCAAACCCAATCAGCCATAAAATGCAAAAAATACAACTGCGCCCCAAATCGATGCCCAGCAAAATGGTGCCGCATAAGGTTATCCCTAAACCTATGCCGATCAAGGCTGTGCCTATGAAACAAGCACAAAACAACTTGCCGTACCCTCTTCGAATTAAGGCACTGAAAGACTTGCAAATTAAAAAGAAGGAACCACAAATTCTAAAGACTCTTTTAACATCTAAGCCTGAGGTTTTGGTGGCTGAGCCAGAAATCATCAACTCTGGCCCAGGCAGTCCCGAAACATTAATTTCCGAGCCGGAAATCGCGTCATTCCAAGTAGAAGCTATTTTATCTGAGCCTGATGGCTTCGACGGACAACATGGAGAGGAAGAAGGTGAGACAGATACTCATGTGAATAACCAAGGTATGTATGATAATGTTGACATGGAGTCTGACAATGAAATTGAGATCGCGCACCAGCGCGATGAAGAAATTACTGACAGGCTTCATATTGATGAAGAAGACGGTGAAGAAAGGATGAGCGAAAACGAGAATAACGTGGAAGACAGTCAAATGTACGATGATGAAAATCAAGATGAAAATCAGGAAGACGAGGAAGCAGACGGTAACGAAGATGCTGAGATGGACGAAATATCTGAAGCGAAAGCTGATGAGGAAGGCAAAGACGACGATAACGTAAACGAAGATGGAGGCGAAGAATACCACGAAGTAAATCCCGATGATAACGATGAAGACATGGACGACGAAGAAGATGCGGCGCCCCTCGGACTCGCACCCGTCGTAGAGATCAACGAAGAACAACACACTAATGACAGCGAAATCAACGAAGGGGATGTTGAGGTAGAGGATGAATTAGACGAATCGGCCGATGCCAATGATTCCGTCGATGGCACGGAGCAGGAAATTGACCCTGACAAGACATACGTCACCAAAAACCAAAGGGACTTTATACTCAAGTACCGCGATGTTATCCAGCAAATCAATACCAAACGCTGCCTGTGCTGCGATAAAGAATACCCGCGTCGCAAAGCCGTTATACAACATCTGCAGAAAAATGGACACAAGGTTCCCAAGCACACATGCTACAATTGCGTCATCACTTTCAGCCACATCGGCGCACTACTCAGCCACATGCGGGCAGATGTGTGCACTAACCTATGGAAGGTTATTTACAATGAAAGCGGCATAACTGACGACATGATTGTTGAAGATGAACCGAAAGATACTAAGGTCCAGTACAAGGATATTTTCAATGCGAGATCCTACGCATGTAAACTGTGTCCGGCTAAATTCCAATTAAAACAGTTCATTACGAAACACGTCCTTGATGTTCACGAAGATGGCCAGTCTCTTGTTACCTTGGCGTGTGTTCACTGCCGGTCACGGTTCAAAGACAAGGGTCTCTGGAAGAAGCATGTCCGCAATGGGGAGTGCACCATTTACATTTCGTGCGATCTGTGCTCGGAGAAGTTCGGCAATGTGCAAGATTTCAACAACCATGCCTTGGCCGTGCACGCCGGTAGTTTTGATCCTGAAAACCAGTCCAAATGTGTTGACGGTCGACCGACTGATTGCCCATTATGCGAGAAAAAGTTGGCTACCTACCAAAACTTGGTCAAACATCTGAAAATATTCCACGATGAAGATAGACCGCATTACTGTCAAAACTGTGATTCCAAATATGAAAAGGCTGAGGAATTAAACAATCATATCTATATGGAACATTCAGATAAGGCCATGGGTATCAAATCTGAGGTCGATATGTCTATCGTCAAAGAAGAAGCTGATGAATATCACTACTCGTGCACTGAGTGTAATGCTATATTCGAAACTGTCGATGCTTGGACTGACCACCAAGTCGCCGAACACAATCAAGTGGCACATCACTGCGACCAGTGCGAGAAAAAATTCTTGCGTCCGTCCGAGCTCGCCGAGCACAAGAACACACACTTGCGAGTGAAGCTCTATCCTTGCAGCATTTGTGCAGATTCTTATAGTACCCCGCAGAAATTATCGGACCATGTGCAGCAAGCGCATCCAGATGCCTCCGTGTACGCTGCAGCCGAGACAGAGTTCTTCTGCGAAATCTGCATTAGGTCGTTTAAGAGTCGTCAAGCGTACTCAAATCATATGCGCATTCACGCCAAAGTGCCCACGACCAACAGAAAACCCGGCGAAAAAGGATTCGCACCACATATTGTCGGCAAACCTATCAAACAATTCCCGATTGTGCAACCTGGAAACGCACTGTACAAGACCAATTGCAATGTTCCTAATGCTCCATACTCGTGTGATATTTGTGGCAAAGGATTTATGCACAAGAAGAATATATGGAAACATAAGAAGGTATTGCATGCTGACCTTGTCAATGACAGAAATGACAGCGAAGAAAACACCATGCAAGCGTCTACAGAAGATGACGAGTATAATGTCGACGAGAATGGCGCTATACTGTCGACACCACAGTTCGACAGTTTTAATTTCTCGAACTACACAAATAATGCGCAAACAACATCTACACCGCAGGAGGCCAAACCAATCTTAACATTTTCATGTGATCTTTGTTACAAGAAATTCCCACTCAAGACTAGCTTATGGAAGCACAAACGAGCAAAGCATGGAATTATAAACGCAAGCACTAGCGGTAGCGTTGAGACACCAACTCACATAATTCCAGTTCAACCTCAATCAAGTTCTGGAGACGGCAGCCGTTCAAGTTGCACTATTTGTAAAGTTACATTCGCTGACAAAAAATCATATTACAGACATAGAAAGAATGTCCACAAATCAACTTCTCAGGTGTGTAAGATTTGCGGTATACCCCTCAGTTCGACCTTAGAATTGTACGAGCATCTGAGAGCTGCCCACGCTCGCGAGCTTCTGGGTTTCAACGCCAGCCAAGGGGTGGTGAAATCCCAACCCCAAGAGACGGGACAGGAGTTAGACATCGATTATGAACAGGAGTCCGGCGACCCTAACACGGAATATCAAGCTCGGTACCCATGCGAGGCCTGCGGAAAACAGTTTGTTGGACTTCTGGCCTTACAAAACCATCAGTGTGTAAACCAGTTATCTAATCAGCCTCAGACTTTCGAATGCGAAATCTGTCACAAAAGTTACACCTCGATCGCCGCGCTAAAGAGCCACCGCGGCTGGCATTTGCGATCGCCTGATGGCAAGGCGGCCGCCAATAATTCTGGCCTATGGATGCCACAGCACAAAGTCACTAATAAGGTCAGCAAACACGAAGTAGTGGACCCTGTGCAGCTTGCCCGTGTCACGCACACGGCGCCAGCGGCTACCGTTGCCAAGCGAAGATTGCCACCAGAAGTAGAAGTGACTGTCGTAAACCCAAATAAAAAATTACGTTCCGATGATTCCGTCGAGATGGATCACAGTAATCCCGGCGGCTCCGAAGATCGCTATTGCACTATATGCGACAAGGAGTTTACCAAGAGAGCAGCGTACCAGCGACATATGGACGAGGTCCATCAGCCTAATTCCGTGTTCTGTCCTGTTTGTGACAAGAGTTTCACCAGGAAATCGACCCTCCTTGTTCACATGAGGAAGCATTATGAAGGCGGCGAGGGCAGTTCTTCGGCCACCGCACAAGATGATGACTCGTACGGTTGCGATCTCTGCGGGGCTCAGTACCAGAACGCTGGCGCATTGCGATCTCACAGGGTGCAGCATCACGGCGAAGTTGAGTCAGCTGAGTCGGAAGATGAGGGTAACGTGCCGGCTGCTCCTCCAGGCGAATTCACTTGTGGACAATGCGGGGACGGCGTTGCGACCCCACGCGACCTCATCGCCCACCGAACCATGCACGCCACTGCCTCTAAGTACTTCTGCACGGTTTGCAAAGTGTACTTCGCTCGGTCCGTCGACTTATCTGCACACACGCGGGCCCGCCACGCTAACGATGGTGAAAAAGTGTTCTTCCCATGCGCCATGTGCGACCGTTTCTACATGAACAAGAAAAGCCTTCAAAGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFRTTSSDGTEPPVLASKIKDCVAVQINENDELPTRVCRKCMDKVNNWHIFKKVCERSQNKLQSLAKKDGSQLEEVKIKSEPLNDELYDDGVVIDASYPGLEQNATSSSKLQPEGPPILASLGLTPRSDKNCVDPRMDWHRVHAILDMVQDDEVIDTLQSFEECDVLHKSEHGSDTEIELLSDIDDEFIDCKIGYKARDKTILSKDPKISNSDTKSKMKQSSALLGKKFKSVNAKHFPQPLDAWQCFFSDDILELIVESTNAIIIKRGLEVSSNTTIQEIKAFFGILYLHGITRPMYQKRSELWNEKYGVAGIKHTMSHDRFKFLLGNLYFDVEDDDESMPQFDTMKRMRKIFEIFAMNCRTMHDIENVAVIDEVIVPVYGPCPFRYDIDKKQLKKGIKLVLLVDPNSFFISNLDVIIDAYFGPDEIAKKLVQHLAGTGKTIVMDSWYTTVSLMETLKTEYQLYSIAALSSDSEVIPPVFLSNLRKSGALMTGFLDRDTSLSSYVNSASKSVNVLTNHPKYYKRGHGVESEKEEMDDEEEVNESKQYEKVPNIPEVSITVMRPTGETLQPRQGFQQLASKNCLICDRAYRYSHNARRHELTAHSFDRYTNKVTNKKHPLAHMQPKLRPNPFNPKARLMPNPISHKMQKIQLRPKSMPSKMVPHKVIPKPMPIKAVPMKQAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVAEPEIINSGPGSPETLISEPEIASFQVEAILSEPDGFDGQHGEEEGETDTHVNNQGMYDNVDMESDNEIEIAHQRDEEITDRLHIDEEDGEERMSENENNVEDSQMYDDENQDENQEDEEADGNEDAEMDEISEAKADEEGKDDDNVNEDGGEEYHEVNPDDNDEDMDDEEDAAPLGLAPVVEINEEQHTNDSEINEGDVEVEDELDESADANDSVDGTEQEIDPDKTYVTKNQRDFILKYRDVIQQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRADVCTNLWKVIYNESGITDDMIVEDEPKDTKVQYKDIFNARSYACKLCPAKFQLKQFITKHVLDVHEDGQSLVTLACVHCRSRFKDKGLWKKHVRNGECTIYISCDLCSEKFGNVQDFNNHALAVHAGSFDPENQSKCVDGRPTDCPLCEKKLATYQNLVKHLKIFHDEDRPHYCQNCDSKYEKAEELNNHIYMEHSDKAMGIKSEVDMSIVKEEADEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKLYPCSICADSYSTPQKLSDHVQQAHPDASVYAAAETEFFCEICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEKGFAPHIVGKPIKQFPIVQPGNALYKTNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMQASTEDDEYNVDENGAILSTPQFDSFNFSNYTNNAQTTSTPQEAKPILTFSCDLCYKKFPLKTSLWKHKRAKHGIINASTSGSVETPTHIIPVQPQSSSGDGSRSSCTICKVTFADKKSYYRHRKNVHKSTSQVCKICGIPLSSTLELYEHLRAAHARELLGFNASQGVVKSQPQETGQELDIDYEQESGDPNTEYQARYPCEACGKQFVGLLALQNHQCVNQLSNQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVVDPVQLARVTHTAPAATVAKRRLPPEVEVTVVNPNKKLRSDDSVEMDHSNPGGSEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMRKHYEGGEGSSSATAQDDDSYGCDLCGAQYQNAGALRSHRVQHHGEVESAESEDEGNVPAAPPGEFTCGQCGDGVATPRDLIAHRTMHATASKYFCTVCKVYFARSVDLSAHTRARHANDGEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545069; iTF_01543161;
- 90% Identity
- -
- 80% Identity
- -