Ycag010520.2
Basic Information
- Insect
- Yponomeuta cagnagella
- Gene Symbol
- -
- Assembly
- GCA_947310995.1
- Location
- OX371275.1:15259811-15271194[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.011 0.78 10.9 1.0 3 23 269 290 268 290 0.96 2 24 3.8 2.7e+02 2.9 1.1 4 23 659 680 657 680 0.84 3 24 0.032 2.3 9.4 0.3 1 21 685 705 685 706 0.96 4 24 3.9 2.8e+02 2.8 0.3 1 23 748 771 748 771 0.84 5 24 0.15 11 7.3 0.8 3 21 782 800 780 801 0.93 6 24 0.79 56 5.0 0.1 2 23 809 831 808 831 0.89 7 24 0.0077 0.55 11.3 0.4 3 23 851 872 849 872 0.95 8 24 0.09 6.4 8.0 1.0 1 23 878 901 878 901 0.93 9 24 0.11 8.1 7.7 0.0 1 23 926 949 926 949 0.90 10 24 0.017 1.2 10.2 3.4 1 23 954 976 954 976 0.97 11 24 0.25 18 6.6 0.1 1 23 982 1005 982 1005 0.95 12 24 0.002 0.15 13.1 1.3 1 23 1018 1040 1018 1040 0.97 13 24 0.00016 0.012 16.6 1.8 1 23 1088 1111 1088 1111 0.97 14 24 0.0044 0.31 12.1 1.9 1 23 1175 1198 1175 1198 0.96 15 24 0.003 0.21 12.6 1.5 2 23 1231 1253 1230 1253 0.95 16 24 0.13 9.5 7.4 0.0 2 23 1259 1281 1258 1281 0.95 17 24 0.072 5.1 8.3 0.1 1 21 1325 1345 1325 1346 0.94 18 24 0.00042 0.03 15.3 0.6 1 23 1356 1378 1356 1378 0.94 19 24 0.0001 0.0073 17.2 0.3 2 23 1467 1489 1467 1489 0.93 20 24 1.3e-07 9.2e-06 26.4 1.3 3 23 1496 1516 1495 1516 0.98 21 24 0.15 11 7.3 0.2 3 23 1536 1556 1534 1557 0.94 22 24 0.11 7.8 7.7 0.0 1 23 1579 1601 1579 1601 0.97 23 24 0.0046 0.33 12.0 0.4 1 23 1607 1630 1607 1630 0.95 24 24 0.00023 0.016 16.1 0.4 1 23 1639 1662 1639 1662 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGATTTATGATCATGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCGTACCACCAGTTCTGACGGTACGGAACCCCCCGTCCTGGCATCAAAAATCAAGGATTGTGTGGCTGTCCAGATAAACGAGAATGACGACCTGCCGACGCGTGTCTGTAGGAAGTGCGTCGACAACGTGAATAACTGGCACATATTTAAGAAAGTGTGTGAGAGGACCCAAAACAAACTTCAATCTTTGGCAAAAAAAGATGGCAGCCAACTAGAAGAGGTCAAAATAAAAAGTGAACCCCTGAATGATGAACTTTATGATGATGGAGTGGTCATTGATGGCTCGTATCCTGGTCTGGAGCAGAATGCCACTTCTTCAAGCAAACTCCAGCCAGAAGGCCCTCCAATCTTGGCATCATTGGGGCTTACACCGAGGAGTGATAAGAACTGTGTGGATCCACGAATGGATTGGCATCGGGTCCATGCTATATTGGACATGGTTCAAGATGATGAGGTCATTGATACTCTGCAGAATTTCGAGGAATGTGATGTTCTACATAAATCTGAACACGGGTCTGATACAGAAATGGAACTACTTTCTGATATTGATGATGAATTTATTGACTGCAAAGGCGTCGAGAGCGAGAAGGAAGAGATAGACTACGAGGAGGAGGTAAATGAGCCCAAACAATTTGAGAAAGTTTCCAACATTCCTGAGGTATCAATTACCGTCATGCGTCCTACCGGGGAGACCCTGCAACCGCGTCAGGGATTTCAACAACTAGCGTCTAAGAATTGCCTCATTTGCGACCGCGCGTACCGGTACTCGCACAATGCCCGCCGCCATGAGCTCACCGCGCATAGCTTCGATCGGTACACAAACAAAGTGACAAACAAAAAACACCCACTTGCACACATGCAACCCAAACTGCGCCCCAACCCGTTCAATCCTAAAGCGCGTCTTATGCCAAACCCAATCAGCCACAAAATGCAAAAAATACAACTGCGCCCCAAATCAATGCCCAGCAAAATGGTGCCGCATAAGGTTATCCCTAAACCTGTGCCGATCAAGGCTGCGCCTATGAAACAAGCACAAAACAACTTGCCGTACCCTCTTCGAATTAAGGCGCTGAAAGACTTGCAAATTAAGAAGAAGGAACCACAAATCCTTAAGACTCTTCTAACATCTAAGCCTGAGGTCTTGGTGGCTGAGCCAGAAATCGTCAACTCTGGCCCAGGGAGTCCCGAAACATTAATTTCCGAGCCAGAAATCGCGTCATTCCAAGTGGAAGCTATCTTATCTGAGCCGGACGGCTTCGACGGACAACATGGAGAAGAAGAAAGTGAGAGAGATACTCATGTGAATAACCAAGGTGCGTATGATAATGTCGACATGGAGTCTGACAATGAAATCGAGATCGCGCACCAGCGGGATGAAGAAATTACTGACAGACTACATATTGACGAAGAAGACGGCGAAGAAAGGATGAGCGAAAACGAAAATAACGCGGACGACAGTCAAATGTATGATGATGAAAATCAAGAAGAAAATCAGGAAGACGAAGAAGTAGATGGTAACGAAGACGCAGAGATGGATGAAATATCTGAAGCGAAAGCTGATGATGAAGGCAAAGATGGCGATAACATAAATGAAGATGGAGGTGCAGAGTACCACGAAGTAAATCCCGATGATAACGATGAAGACATGGACGATGAAGAAGATGCGGCGCCCCTCGGCCTTGCACCCGTCGTGGAGATCAACGAAGAACAACACACTAATGACAGCGAAATCCACGAAGAGGATGTTGAGGAAGACGATGAATTAGATGAATCGGCCGATGCCAATGACACCGTTGATGGCACGGCGCAGGAAATTGACCCTGACAAGATATACGTCACCAAGACTCAAAGGGATTTCATACTCAAGTACCGCGATGTTATTCAGCAAATTAACACCAAACGCTGCCTTTGTTGCGATAAAGAATACCCGCGTCGCAAAGCCGTTATACAACATCTGCAGAAAAATGGACACAAGGTTCCCAAGCACACATGCTACAATTGCGTCATCACTTTCAGCCACATCGGCGCGCTACTCAGCCACATGCGGGCAGATGTGTGCACAAACCTTTGGAAGGTTATTTACAATGAAAACGGCATAACTGACGACATGATTGTTGAAGATGAACCTAAAGATAATAAGGTCCAGTATAAGGATATTTTTAATGCGAGATCCTACGCATGCAAACTGTGCCCGGCTAAATTCCAATTGAAACAGTTCATTACGAAACACGTCCTTGATGTTCACGAAGATGGACAATCTCTTGTGACCTTGGCGTGTGTTCACTGCCGGTCACGGTTCAAAGACAAGGGTCTCTGGAAGAAGCATGTACGCAATGGGGAGTGCACCATTTATATTTCGTGCGATCTATGCTCAGAGAAGTTCGGCAATGTGCAGGATTTCAACAACCACGCCTTGGCCGTGCACGCCGGGAGTTTTGATCCTGAAAACCAGTCCAAGTGTGTCGATGGTCGACCGACTGATTGCCCATTATGCGAGAAGAAGTTGGCTACCTACCAGAACTTGGTCAAACATCTGAAATTATTCCACGATGAAGACAGACCGCATTACTGTCAAAACTGTGATTCCAAGTATGAAAAGGCTGAGGAATTGAACAATCACATTTATTTGGAACATTCAGATAAGGCTATGGGTATCAAGTCTGAGATCGATATGTCTATCGTCAAAGAAGAAGCTGAAGAATATCACTACTCATGCACTGAGTGCAACGCTATATTCGAGACTGTCGATGCTTGGACCGACCACCAAGTTGCGGAACATAATCAAGTGGCTCACCACTGCGACCAGTGCGAGAAAAAATTCTTGCGTCCGTCTGAGCTCGCCGAGCACAAGAACACACACTTGCGAGTGAAGCTCTATCCTTGCAGCATCTGTGCAGATTCTTATAGTACCCCGCAGAAACTATCGGACCATGTGCAGCAAGCGCATCCAGATGCCTCCGTGTACGCTGCAGCCGAGACAGAGTTCTTCTGCGAAATCTGCATAAGGTCGTTCAAGAGTCGTCAAGCGTACTCCAATCATATGCGCATTCACGCCAAAGTGCCCACGACCAACAGAAAACCCGGCGAAAAAGGATTCGCGCCACAAATAGTCGGCAAACCCATCAAACAATTCCCGATTGTGCAACCTGGAAATGTACTGTACAAGACCAATTGCAATGTTCCTAATGCTCCATACTCGTGTGATATTTGTGGCAAAGGATTTATGCACAAGAAGAATATATGGAAACATAAGAAAGTTTTGCATGCTGACCTTGTCAATGACAGAAATGACAGCGAAGAAAACACCATGCAAGCGTCTACAGAAGATGACGAGAATAATGACGAGAATGGCGCTATACTATCGACACCACAGTTCGACAGTTTTAATTTCTCGAACTACACAAACAATGCGCAAACAACGTCTACACCGCAGGAGGCAAAACCAATCTTAACATTTTCATGTGATCTTTGCTACAAGAAGTTCCCACTCAAGACTAGCTTATGGAAGCACAAACGGGCAAAGCATGGAATTATAAATGCAAGCACTAGCGGTAACGCTGAGACACCAACTCACGTCATCCCAGTTCAACTTCAATCAAGTTCTGGAGACGGCAGCCGGTCGAGTTGCACTATTTGTAAAGTTACGTTCGCTGACAAAAAATCATATTACAGGCATAGAAAGAATGTCCATAAATCAACTTCCCAGGTGTGCAAGATTTGCGGGATACCACTCAGTTCGACCTTAGAACTGTATGAGCATCTGAGAGCGGCCCACGCGCGCGAGCTTCTGGGATTCAACGCCAGTCAAGGCGGGGTGAAATCCCAATCTCAAGAGACGGGGCAGGAGTTAGAAGTCGATTACGAACCGGAGTCCGGCGACCCCAACACGGAATATCAAGCCCGCTACCCATGCGAGGCCTGCGGAAAACAGTTTGTTGGACTTCTGGCCTTACAAAACCATCAGTGTGTAAACCAGTTGTCTAATCAGCCTCAGACATTCGAGTGCGAAATCTGCCACAAAAGTTACACCTCGATCGCCGCGCTGAAGAGTCACCGCGGCTGGCATTTGCGATCGCCTGATGGCAAGGCGGCCGCAAATAATTCCGGCCTATGGATGCCACAGCATAAAGTCACTAATAAGGTCAGCAAACACGAAGTAGTGGACCCTGTGCAGCTCGCCCGTGTCACCCACACAGCTCCAACCGCTACAGTCGCCAAGCGAAGACTGCCACCGGAAGTAGAAGTGACTGTCGTAAACCCTAACAAGAAATTACGCTCAGACGATTCCATCGAGATGGACCACAGTAATCCCGGCGGATCCGAAGATCGCTACTGCACTATATGCGACAAGGAGTTTACCAAGAGAGCGGCGTACCAGCGCCATATGGACGAGGTCCATCAGCCTAACTCCGTTTTCTGTCCCGTTTGTGACAAAAGTTTTACCAGGAAATCGACTCTCCTTGTTCACATGAGGAAGCATTACGAAGGCGGCGAGGGCAGCTCGTCGGCCACCGCACAAGACGAAGACTCGTATGGTTGCGATCTCTGCGGGGCTCAGTACCAAAACGCCGGCGCGTTGCGATCTCACAGGGCGCAGCATCACGGCGAAGTTGAGTCAGCCGAGTCGGAAGATGAGGGCAACGTGCCGGCTGCTCCTCCGGGTGAATTCACTTGCGGACAATGCGGGGACGGCGTCGCGACCCCGCGCGACCTTATCGCCCACCGAACCATGCATGCCACTTTCTCTAAATACTTCTGCACGGTTTGCAAGGTGTACTTCGCTCGGTCCGTCGACTTATCTGCACACACACGGGCCCGCCACGCCAGCGATGGCGAAAAGGTGTTCTTCCCATGCGCCATGTGTGACCGTTTCTACATGAACAAGAAAAGTCTCCAAAGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVIYDHVCRLCLSSRGELLPIFRTTSSDGTEPPVLASKIKDCVAVQINENDDLPTRVCRKCVDNVNNWHIFKKVCERTQNKLQSLAKKDGSQLEEVKIKSEPLNDELYDDGVVIDGSYPGLEQNATSSSKLQPEGPPILASLGLTPRSDKNCVDPRMDWHRVHAILDMVQDDEVIDTLQNFEECDVLHKSEHGSDTEMELLSDIDDEFIDCKGVESEKEEIDYEEEVNEPKQFEKVSNIPEVSITVMRPTGETLQPRQGFQQLASKNCLICDRAYRYSHNARRHELTAHSFDRYTNKVTNKKHPLAHMQPKLRPNPFNPKARLMPNPISHKMQKIQLRPKSMPSKMVPHKVIPKPVPIKAAPMKQAQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVAEPEIVNSGPGSPETLISEPEIASFQVEAILSEPDGFDGQHGEEESERDTHVNNQGAYDNVDMESDNEIEIAHQRDEEITDRLHIDEEDGEERMSENENNADDSQMYDDENQEENQEDEEVDGNEDAEMDEISEAKADDEGKDGDNINEDGGAEYHEVNPDDNDEDMDDEEDAAPLGLAPVVEINEEQHTNDSEIHEEDVEEDDELDESADANDTVDGTAQEIDPDKIYVTKTQRDFILKYRDVIQQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRADVCTNLWKVIYNENGITDDMIVEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFITKHVLDVHEDGQSLVTLACVHCRSRFKDKGLWKKHVRNGECTIYISCDLCSEKFGNVQDFNNHALAVHAGSFDPENQSKCVDGRPTDCPLCEKKLATYQNLVKHLKLFHDEDRPHYCQNCDSKYEKAEELNNHIYLEHSDKAMGIKSEIDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKLYPCSICADSYSTPQKLSDHVQQAHPDASVYAAAETEFFCEICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEKGFAPQIVGKPIKQFPIVQPGNVLYKTNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLVNDRNDSEENTMQASTEDDENNDENGAILSTPQFDSFNFSNYTNNAQTTSTPQEAKPILTFSCDLCYKKFPLKTSLWKHKRAKHGIINASTSGNAETPTHVIPVQLQSSSGDGSRSSCTICKVTFADKKSYYRHRKNVHKSTSQVCKICGIPLSSTLELYEHLRAAHARELLGFNASQGGVKSQSQETGQELEVDYEPESGDPNTEYQARYPCEACGKQFVGLLALQNHQCVNQLSNQPQTFECEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKHEVVDPVQLARVTHTAPTATVAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHSNPGGSEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMRKHYEGGEGSSSATAQDEDSYGCDLCGAQYQNAGALRSHRAQHHGEVESAESEDEGNVPAAPPGEFTCGQCGDGVATPRDLIAHRTMHATFSKYFCTVCKVYFARSVDLSAHTRARHASDGEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545939;
- 90% Identity
- iTF_01545069;
- 80% Identity
- -