Basic Information

Insect: Yponomeuta plumbellus
Gene Symbol: -
Assembly: GCA_947310845.1
Location: OX371221.1:9185095-9189998[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.8e-05 0.0035 18.5 0.1 2 23 212 233 211 233 0.96

2 14 6.7e-05 0.0062 17.8 0.2 1 23 239 262 239 262 0.97

3 14 0.036 3.3 9.2 1.3 1 23 268 290 268 290 0.98

4 14 0.00012 0.011 17.0 3.7 1 23 296 318 296 318 0.99

5 14 6.1e-06 0.00057 21.0 3.9 1 23 324 346 324 346 0.99

6 14 8.4e-07 7.8e-05 23.7 1.9 1 23 352 375 352 375 0.95

7 14 7e-05 0.0065 17.7 3.8 1 23 381 403 381 403 0.96

8 14 1.1e-05 0.001 20.2 0.2 1 23 409 431 409 431 0.98

9 14 1.2e-05 0.0011 20.1 0.9 1 23 437 459 437 459 0.99

10 14 1.6e-07 1.5e-05 26.0 2.2 1 23 465 487 465 487 0.98

11 14 2.5e-07 2.4e-05 25.4 1.3 1 23 493 515 493 515 0.99

12 14 0.011 0.98 10.8 0.7 1 23 521 540 521 540 0.96

13 14 1.1e-05 0.001 20.2 1.9 1 23 546 568 546 568 0.98

14 14 0.00018 0.017 16.4 2.9 1 23 574 596 574 596 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.8e-05	0.0035	18.5	0.1	2	23	212	233	211	233	0.96
2	14	6.7e-05	0.0062	17.8	0.2	1	23	239	262	239	262	0.97
3	14	0.036	3.3	9.2	1.3	1	23	268	290	268	290	0.98
4	14	0.00012	0.011	17.0	3.7	1	23	296	318	296	318	0.99
5	14	6.1e-06	0.00057	21.0	3.9	1	23	324	346	324	346	0.99
6	14	8.4e-07	7.8e-05	23.7	1.9	1	23	352	375	352	375	0.95
7	14	7e-05	0.0065	17.7	3.8	1	23	381	403	381	403	0.96
8	14	1.1e-05	0.001	20.2	0.2	1	23	409	431	409	431	0.98
9	14	1.2e-05	0.0011	20.1	0.9	1	23	437	459	437	459	0.99
10	14	1.6e-07	1.5e-05	26.0	2.2	1	23	465	487	465	487	0.98
11	14	2.5e-07	2.4e-05	25.4	1.3	1	23	493	515	493	515	0.99
12	14	0.011	0.98	10.8	0.7	1	23	521	540	521	540	0.96
13	14	1.1e-05	0.001	20.2	1.9	1	23	546	568	546	568	0.98
14	14	0.00018	0.017	16.4	2.9	1	23	574	596	574	596	0.98

Sequence Information

Coding Sequence: ATGGCCGAAACTTCAAGTTTTCCGGACGGCCTATGCCGCTGTTGCCATGCACACGGCAGTTTCAAAAATCTCGGCGAAACCTACGTCGTTGATGGCAAAAAAGAGATCTACTCAGTTCTCATCCGCGAATCCTTTGATATAATCATAACCCCAACATCGCCTGAGAACAATGCCTCCTACGCGATCTGTGATCCCTGCATCTTGAGCCTGAAGGATGCTGTCAAGTTCAAAGACCAGGTGCTGACCTGTGAGAAAAAGTTCACCGAGTACTATCAAACTGACAGAAAAATTGAAACTAATGTCAAGGTGGAAGAGTATAGTTATTGTGTTGATATTATAAAGAATGAAGATTGCAATGAAGAGGAGAATATTAAGGATGTGAAGCCAAACTATGTTTCTGACGACGATCACCACTCGGACGTATTTACCGAGCCCAGTCCTGCCCCGAGCAAGCCGAAACGCAAGCGCCGGACGGTCCGCGCGTGCCGGAAGAAGGGCAGGGCGCCCAAAGATGAGGATGAAACGTCAGACCAGGATTGTGGTAACCAGGGCAACGAGTGGGCGGCGGAGACTGAAGACGCGCCGGATGTTAGTGACGATGACATATCGAAGAACGGCAAAGCGAAACTCCTCTCCTGCGAGATATGCCAGAAGAAATTCGTCTACCAAGGCTTCCTAGAAGCTCATATGGCTATCCATGCTggcaacaagaagtacccctgcctcgtctgcaagaaagtgtacccgaagaacaaggaactgatgaatcatatggagaaagcgcacgtggagaatggaacgttcccttgcaatgtgtgttcgaacgtgtgtctcacggcgaagttgttaaagaagcatcttttaactcacttcaacgatagaatattcaagtgcgacgtttgcagtcgagagtttaaagttcgcaaatgcttgaaggaacacatgcttactcacacaaaggagaaaaaattcaagtgtgaagtctgcagcaaaagtttcgctcacaaccagacgctaaaatcccacatgtatactcacactggagaaaaaccctatgtgtgccacatctgtggccggggattccctcaaaggactcatctgagacgccacatcttcatcatacacaaggggttgaaaccgcacgcgtgcagcgtctgccataagcagttttcgagtcgcagctacttggctatacacgagcgaaggcatacaggtgaaaagccgttctcctgtgacatctgtaagaaaccgtttgcagcatacgctaccttgaaagttcacatgagggtccacaccggtgataagccctattcttgcacgatgtgcggaagacagtttgctcaagtctccagctttaaaatacatgaaagaacgcacacaggagaacgtccacatgtttgtaaagtatgcaagaaaccattctcagacaaggggtatttaaaaattcacatgagaacacatacgggtgaacgtccatacacatgtgagatttgcaagcgacagttcagagagtccggtcaattgaaacgtcacatgagagtccataccggtatcaaaccgtacacttgcaaagtatgcaataagcaggtcgctaatctttcaaaacacatgagggtacactccgatgagagaccgtacaactgtgatctttgcagcaaacagttttcagtgcacggcaacttgaaactgcacatgagaatccatacaggggagaggccattctcttgtgatatttgcagtagtcagtttgcacagagtagtgggctgaagaggcatcgatgcacgcatttggggaaaCTGGATGAGAGTGTGATCAACTCTTTATAA
Protein Sequence: MAETSSFPDGLCRCCHAHGSFKNLGETYVVDGKKEIYSVLIRESFDIIITPTSPENNASYAICDPCILSLKDAVKFKDQVLTCEKKFTEYYQTDRKIETNVKVEEYSYCVDIIKNEDCNEEENIKDVKPNYVSDDDHHSDVFTEPSPAPSKPKRKRRTVRACRKKGRAPKDEDETSDQDCGNQGNEWAAETEDAPDVSDDDISKNGKAKLLSCEICQKKFVYQGFLEAHMAIHAGNKKYPCLVCKKVYPKNKELMNHMEKAHVENGTFPCNVCSNVCLTAKLLKKHLLTHFNDRIFKCDVCSREFKVRKCLKEHMLTHTKEKKFKCEVCSKSFAHNQTLKSHMYTHTGEKPYVCHICGRGFPQRTHLRRHIFIIHKGLKPHACSVCHKQFSSRSYLAIHERRHTGEKPFSCDICKKPFAAYATLKVHMRVHTGDKPYSCTMCGRQFAQVSSFKIHERTHTGERPHVCKVCKKPFSDKGYLKIHMRTHTGERPYTCEICKRQFRESGQLKRHMRVHTGIKPYTCKVCNKQVANLSKHMRVHSDERPYNCDLCSKQFSVHGNLKLHMRIHTGERPFSCDICSSQFAQSSGLKRHRCTHLGKLDESVINSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01545065;
90% Identity: iTF_01545065;
80% Identity: -