Basic Information

Insect: Yponomeuta padella
Gene Symbol: -
Assembly: GCA_947311075.1
Location: OX371258.1:8049060-8056131[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4e-05 0.0027 18.5 0.1 2 23 211 232 210 232 0.96

2 14 2.7e-05 0.0018 19.1 0.5 1 23 238 261 238 261 0.97

3 14 0.077 5.1 8.2 0.3 1 23 267 289 267 289 0.96

4 14 0.00012 0.0082 17.0 3.7 1 23 295 317 295 317 0.99

5 14 6.5e-06 0.00044 21.0 3.9 1 23 323 345 323 345 0.99

6 14 8.9e-07 6e-05 23.7 1.9 1 23 351 374 351 374 0.95

7 14 7.4e-05 0.005 17.7 3.8 1 23 380 402 380 402 0.96

8 14 1.2e-05 0.00078 20.2 0.2 1 23 408 430 408 430 0.98

9 14 1.2e-05 0.00083 20.1 0.9 1 23 436 458 436 458 0.99

10 14 1.7e-07 1.2e-05 26.0 2.2 1 23 464 486 464 486 0.98

11 14 2.7e-07 1.8e-05 25.4 1.3 1 23 492 514 492 514 0.99

12 14 0.011 0.75 10.8 0.7 1 23 520 539 520 539 0.96

13 14 1.2e-05 0.0008 20.2 1.9 1 23 545 567 545 567 0.98

14 14 0.0015 0.098 13.6 5.6 1 23 573 595 573 595 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4e-05	0.0027	18.5	0.1	2	23	211	232	210	232	0.96
2	14	2.7e-05	0.0018	19.1	0.5	1	23	238	261	238	261	0.97
3	14	0.077	5.1	8.2	0.3	1	23	267	289	267	289	0.96
4	14	0.00012	0.0082	17.0	3.7	1	23	295	317	295	317	0.99
5	14	6.5e-06	0.00044	21.0	3.9	1	23	323	345	323	345	0.99
6	14	8.9e-07	6e-05	23.7	1.9	1	23	351	374	351	374	0.95
7	14	7.4e-05	0.005	17.7	3.8	1	23	380	402	380	402	0.96
8	14	1.2e-05	0.00078	20.2	0.2	1	23	408	430	408	430	0.98
9	14	1.2e-05	0.00083	20.1	0.9	1	23	436	458	436	458	0.99
10	14	1.7e-07	1.2e-05	26.0	2.2	1	23	464	486	464	486	0.98
11	14	2.7e-07	1.8e-05	25.4	1.3	1	23	492	514	492	514	0.99
12	14	0.011	0.75	10.8	0.7	1	23	520	539	520	539	0.96
13	14	1.2e-05	0.0008	20.2	1.9	1	23	545	567	545	567	0.98
14	14	0.0015	0.098	13.6	5.6	1	23	573	595	573	595	0.98

Sequence Information

Coding Sequence: ATGGCCGAAACTTCAAGTTTTCCTGACGGCCTATGCCGCTGTTGCCATGCACATGGCAGTTTCAAAAATCTGGGTGAAACCTACATTGTTGAAGGCAAAAAAGAGATCTACTCAGTTCTCATCCGCGAATCTTTTGATATTATTATTACCCCAACTTTGCCTGACAACAATGCCTCCTACATGATCTGTGATCCTTGCATCTCGAGCCTGAAGGATGCCGTCAGGTTCAAAGACCAGGTCCTAACCTGTGAGAAAAAGTTCACCGAGTACTATCAAAATGACAGCAAAATTGAAACTAATGTTAAGGTGGAAGAGTATAATTATTGTGTTGATATAAAGAATGAGACTTACAATGAAGAGGAGAATATTAAGGACGTGAAACTAAACGATGTTTCGGACGACGATCACAACTCGGACGTATTCACCGAGCCCACTCCGGCCGCGAGCAAGCCGAAACGCAAGCGCCGGACGGTCCGCGCGTGCCGTAAGAAGGGCAAGGCGCCCAAAGTCGAGGATGAAGCGTCAGACCATGATGGTGGGGATCAGGATAATGAGTGGGCGGCGGAGACTGAAGACGCGCCGGATGTTAGTGACGATGACATATCGAAGAACGGCAAAGCGAAACTCCTGTCCTGCGAGATTTGCCAGAAGAAGTTCGTCTACCAAGGTTTCCTGGAAGCGCATATGGCCATCcacgccggcaacaaacagtacccctgcctcgtatgcaagaaagtgtacacgaaaaacaaggaactgatgaaccatatggagaaaatacatgtggaaaatggaacgttcccttgcaacgtgtgttcgaacgtttctctcacggcgaagttattaaaaaagcatcttttgacgcacttcaacgataggattttcaagtgcgacgtgtgcagtcgcgagttcaaagtgcgcaaatgcttaaaggaacacatgctcactcatacgaaggagaagaaattcaaatgtgaggtctgcagcaagagtttcgcccacaaccagacgttaaaatcccacatgtatacacacacgggggaaaagccctacgtgtgccacatctgtggccggggattcccgcaacggactcacttgagacgccacatcttcatcatacacaaagggttgaaaccgcacgcgtgcagcgtctgccataaacagttttcgagtcgaagctacttggctatccacgagcgaagacatacaggcgaaaagccgttctcctgcgacatttgtaagaaaccgtttgcggcttacgctacactgaaagttcacatgagggtccacaccggggacaagccgtattcctgcacaatgtgcggcagacagttcgctcaggtctccagctttaaaatacacgagagaacgcacacaggagagcgtccacacgtctgcaaagtctgcaagaagccgttctcagacaaaggctacttgaagatccacatgagaacgcatacaggtgagcgtccgtacacatgtgagatttgcaagcgacaattcagagagtccggacaattgaaacgtcacatgagagtccataccggcgtcaaaccgtacacatgcaaagtatgcaataaacaggttgccaacctctcaaaacacatgagggtccactccgatgagaggccgtacaactgtgatctttgcagcaaacagttttctgtgcacggtaacttgaaattgcatatgaggattcatacgggagaaaggccgttctcttgcgacatgtgcagcagtcactttgcgcagagtagcgggcttaagaggcatcggtgcacccatatgggtaaaCTGGATGAGAGTGTGATCAACTCTTTATAA
Protein Sequence: MAETSSFPDGLCRCCHAHGSFKNLGETYIVEGKKEIYSVLIRESFDIIITPTLPDNNASYMICDPCISSLKDAVRFKDQVLTCEKKFTEYYQNDSKIETNVKVEEYNYCVDIKNETYNEEENIKDVKLNDVSDDDHNSDVFTEPTPAASKPKRKRRTVRACRKKGKAPKVEDEASDHDGGDQDNEWAAETEDAPDVSDDDISKNGKAKLLSCEICQKKFVYQGFLEAHMAIHAGNKQYPCLVCKKVYTKNKELMNHMEKIHVENGTFPCNVCSNVSLTAKLLKKHLLTHFNDRIFKCDVCSREFKVRKCLKEHMLTHTKEKKFKCEVCSKSFAHNQTLKSHMYTHTGEKPYVCHICGRGFPQRTHLRRHIFIIHKGLKPHACSVCHKQFSSRSYLAIHERRHTGEKPFSCDICKKPFAAYATLKVHMRVHTGDKPYSCTMCGRQFAQVSSFKIHERTHTGERPHVCKVCKKPFSDKGYLKIHMRTHTGERPYTCEICKRQFRESGQLKRHMRVHTGVKPYTCKVCNKQVANLSKHMRVHSDERPYNCDLCSKQFSVHGNLKLHMRIHTGERPFSCDMCSSHFAQSSGLKRHRCTHMGKLDESVINSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01546833; iTF_01543155; iTF_01544155; iTF_01561299; iTF_01545934;
90% Identity: iTF_01546833; iTF_01543155; iTF_01544155; iTF_01545934;
80% Identity: iTF_01543155;