Yplu028126.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- dmd-4
- Assembly
- GCA_947310845.1
- Location
- OX371196.1:10507018-10526492[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-25 3.1e-21 75.8 11.6 1 47 7 53 7 53 0.98 2 2 1.2 9.7e+03 -2.6 5.4 3 11 284 292 282 293 0.88
Sequence Information
- Coding Sequence
- ATGAACAGCAGTCGGGCGCGAGTGCCAAAGTGCGCGCGGTGCCGCAACCACGGCTACATTTCCAGCCTGCGAGGGCACAAGAAGGCGTGCAAGTACCGGAACTGCCAATGCCCGAAGTGTGGGCTCATCAAGGAGCGACAGCGGATCATGGCAGCACAGGTCGCGCTGAAGCGGCAGCAGGCGGCCGAGGACAAGATAGCCCTCCACCTGGCGTCGGTGGAGAGCGGCACAGCAATGAAGGCGCTGCCGCCGGGGCGTATATATGGCATGCAAGTAACGGGGCCTAGCCCTAGCCCTGGGGCCGAGCCTGACTCAGCGGCGGACGACCTGACGCCGATTCACATCGACAGCGAGACCAGCGACTCCATTCCGGACTGCTGCAGCGTGTCGCCAGACTCCGCTGGGCCTATATCTGTGTCACCACGACCACGTGTGGGCACAAGTGACGCTGGCGAGATGGAAGCGTCAGTGAGCGCGGCCGGCCTCGAGATGCTGAGCAAGCTGTTCCCGGGCAAGAAGCGGGCGGTGCTGGAGCTGGTGCTGCGCCGCTGCAACCAGGACCTGCTGCGGGCTGTGGAACACTTCAACGCTACCCATGGCTCCCACGACAAGGCCGCGGCCGCGGGCTCCAGCACGTTCGAGCCCTCTGTTACTAGCTCAGAGGAGTCAGAGCCCCGCTGGTCGGCGTTCCGTCCCGTGGGACAGCGCGCGCCATTGCTTCCTGCTCTGGTTATGGGCCGAGTCTGCGGCTCCGACTGGCTAGTACCTCTGCCTGCACTCCCGACTTTGTCCGCTCCATTGCTGTTTCCGTTCCAACACTCTCAGGCGCGGTCCTGCGGCCCCTGCGCACCTGATTGCCGACAGTGTAATGCGCACCACTAA
- Protein Sequence
- MNSSRARVPKCARCRNHGYISSLRGHKKACKYRNCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTAMKALPPGRIYGMQVTGPSPSPGAEPDSAADDLTPIHIDSETSDSIPDCCSVSPDSAGPISVSPRPRVGTSDAGEMEASVSAAGLEMLSKLFPGKKRAVLELVLRRCNQDLLRAVEHFNATHGSHDKAAAAGSSTFEPSVTSSEESEPRWSAFRPVGQRAPLLPALVMGRVCGSDWLVPLPALPTLSAPLLFPFQHSQARSCGPCAPDCRQCNAHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01561167; iTF_01547595; iTF_00162861;
- 90% Identity
- iTF_01561167;
- 80% Identity
- -