Yplu005166.1
Basic Information
- Insect
- Yponomeuta plumbellus
- Gene Symbol
- -
- Assembly
- GCA_947310845.1
- Location
- OX371194.1:613392-615853[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-09 2.2e-06 28.1 0.1 2 39 16 53 15 56 0.92
Sequence Information
- Coding Sequence
- ATGGTCAGAAACTACAAAAAAAAGACTAAAAGAGGAGAATGGTCCCAAGAGTCCATGAAAGCAGCTATAGATGAAGTATTGAGCAAAAATTCAGGATATAGAAAGGCAGCCTTAGAACATAATATTCCTCAAACTACTTTGGAGCGTTATGTCAAGAAAATTAAACGAGGTGAAGAAATTACCGTCGGATTACCATTGGGGCCTATGAAGTCTGTTTTTTCGCAAAACGAAGAAAAAGAACTTGCAGAATATGTAAAACATATGGAGGAACGACTTTTTGGCTTAACTACATTGGATTTACGGCGTCTGGCATACCAGTTGGCTGTTAAATATAATAAAAAGCACAACTTCAATAATGAGAAAGAGATGGCAGGTGTCGACTGGCTAAATGGGTTTTTAAAACGTAATCCCGATTTATCAATTCGTAAACCAGAGGCTACTTCGGCAGCGCGCGCTATGGGATTCAACCGAGTAGCAGTTGGGAATTTCTACCAGCTTCTCGGGGAAACATATGACGCATTTCATTTTACTCCAGATAAAATCTATAACTGCGACGAGACTGGTATATCTGTTGTTTCGAAAACGAAGAGCAAGATAATAGCCTTAAAAGGAAGAAAACAAGTCGGTTCATTATCTTCTGCAGAGCGAGGCCAAACCGTCACTGTAGAAATTTGTTTCAATGCTGCTGGAACGTATATGCCTCCATTCATTATTTTCCCAAGACAGCGTATGAAACCTGAATTGCTAGACAATGCTCCCCCAGGAACAACATCAGTATGTAATCCAAAAGGCTGGATAACAGTTGAACTGTTCACCCTTTGGTTCAAAAAGTTCATCCAATTTACAGGAGCTTCCCCTAGCAATAAAGTGTTGCTGCTTTTAGACGGACATGTAAGTCATACCCAAAATATAGATGTTATAGATCTTGCACGTCAACATGGAGTTGTAATAATTTGCTTTCCACCGCACTGTACGCATAAAATGCAACCTGCTGATGTAGGTTTCATGAGGCCTTTAAGTACTTATTATGACCATGCTGCCTCAAATTGGTTGAGATCGCATCCAGGACGCGTAATCACCATGTTTCAAATAAGCGAAATATTTGGACAAGCTTACATGCAAGCAGCTACGATGTCCACAGCGGTCAACAGCTTCAGGAAGTGTGGTATTTGGCCATACAACCAAGATAATTTCAGTGATGCTGACTTCATAGCTGCGGAAACTACAAATATACCATTAGCTCAAGACAATCCATCTACGTCAAGGGCTATCGCAAACATACCTCCTCATTCCGGACTTGAAGTGTCAACAACTTCAAACTTTGTGAACGCGCAGTCGATGGAAACAGAGCCTCATACAGAACCTGAAATACCATCCGCGTCAAGTTCTGCAATTCTTCCTTCAACAGAGTCAGTACCTCATTCCGGTCGTGAAGAACCAACCATGTCAAGTCTTGTCAACGCTCAATCAATGGAGACAGAGTCCCAAACTGGATCTACGTTGATTTCTGCAAACTTTGCCTCAACAGAGTCATCACATCATTCTGGACATAAAGTACCAGCCACGTCGAGCTTTGTTAATGATCAGTCAATGGAAATAGAGCCTCATAGTGGACATGAATCACCATCCACTTTAAGCTCTGCATACTTTGCTTCAACAAAGGAAGCACTTAATCCCGGATATGAAGTGCCAGCTGCGTCAAGCTTTTTCAACGCTTGCTCGATGGAGACAGAAGCTCATACTGGATCTCTAGCACCATCCACGTTAACTCCTGCAAACCTTCTTTCAACAGAGTCAGCATCTCGCACCGAATCTGATGATAAGAGAGGGTCTAAATTCGGACATAACACATCTGAAACTGAACAAGTTCCATCGATTCATGAAGATCTCCTAGCACCTGTTCTCTCCGAACATCAACaagaagataccgtttgtttttattgtaacgatataaacaacacgtacctaaaatcaactgaaaattgggtaaaatgtcaactctgtgagcggtgggctcatactgcatgtgctggggtggatgatgaagacttaaatgaagtactgatatgcttgttctgtgaagaagaataa
- Protein Sequence
- MVRNYKKKTKRGEWSQESMKAAIDEVLSKNSGYRKAALEHNIPQTTLERYVKKIKRGEEITVGLPLGPMKSVFSQNEEKELAEYVKHMEERLFGLTTLDLRRLAYQLAVKYNKKHNFNNEKEMAGVDWLNGFLKRNPDLSIRKPEATSAARAMGFNRVAVGNFYQLLGETYDAFHFTPDKIYNCDETGISVVSKTKSKIIALKGRKQVGSLSSAERGQTVTVEICFNAAGTYMPPFIIFPRQRMKPELLDNAPPGTTSVCNPKGWITVELFTLWFKKFIQFTGASPSNKVLLLLDGHVSHTQNIDVIDLARQHGVVIICFPPHCTHKMQPADVGFMRPLSTYYDHAASNWLRSHPGRVITMFQISEIFGQAYMQAATMSTAVNSFRKCGIWPYNQDNFSDADFIAAETTNIPLAQDNPSTSRAIANIPPHSGLEVSTTSNFVNAQSMETEPHTEPEIPSASSSAILPSTESVPHSGREEPTMSSLVNAQSMETESQTGSTLISANFASTESSHHSGHKVPATSSFVNDQSMEIEPHSGHESPSTLSSAYFASTKEALNPGYEVPAASSFFNACSMETEAHTGSLAPSTLTPANLLSTESASRTESDDKRGSKFGHNTSETEQVPSIHEDLLAPVLSEHQQEDTVCFYCNDINNTYLKSTENWVKCQLCERWAHTACAGVDDEDLNEVLICLFCEEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01543847;
- 90% Identity
- iTF_01543847; iTF_01544817; iTF_00825631;
- 80% Identity
- -