Yevo025335.1
Basic Information
- Insect
- Yponomeuta evonymella
- Gene Symbol
- -
- Assembly
- GCA_963969515.1
- Location
- OZ018364.1:12522086-12523900[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-09 1.9e-06 28.4 0.1 2 39 16 53 15 56 0.92
Sequence Information
- Coding Sequence
- ATGGTcagaaactacaaaaaaaagacTAAAAGAGGAGAATGGTCCCAAGAGTCCATGAAAGCAGCTATAGATGAAGTATTGAGCAAAAATTCAGGATATAGAAAGGCAGCCTTAGAACATAATATTCCTCAAACTACTTTGGAGCGTTATGTCAAGAAAATTAAACGAGGTGAAGAAATTACCGTCGGATTACCATTGGGGCTTATGAAGTCTGTTTTTTCGCAAAACGAAGAAAAAGAACTTGCAGAATATGTAAAACATATGGAGGAACGACTTTTTGGCTTAACTACATTGGATTTACGGCGTCTGGCATACCAGTTGgctgttaaaaataataaaaagcacaACTTCAATAATGAGAAAGAGATGGCAGGTGTCGACTggctaaatgggtttttaaaacgTAATCCCGATTTATCAATTCGTAAACCAGAGGCTACTTCGGCAGCGCGCGCTATGGGATTCAACCGAGTAGCAGTTGGGAATTTCTACCAGCTTCTCGGGGAAACATATGACGCATTTCATTTTACTCCAGATAAAATCTATAACTGCGACGAGACTGGTATATCTGTTGTTTCGAAAACGAAGAGCAAGATAATAGCCTTAAAAGGAAGAAAACAAGTAGGTTCATTATCTTCTGCAGAGCGAGGCCAAACCGTCACTGTAGAAATTTGTTTCAATGCTGCTGGAACGTACATGCCTCCATTCATTATTTTCCCAAGACAGCGTATGAAACCTGAATTGCTAGACAATGCTCCCCCAGGAACAACATCAGTATGTAATCCAAAAGGCTGGATAACAGTTGAACTGTTCACCCTTTGGTTCAAAAAGTTCATCCAATTTACAGGAGCTTCCCCTAGCAATAAAGTGTTGCTGCTTTTAGACGGACATGTAAGTCATACCCAAAATATAGATGTTATAGATCTTGCACGTCAACATGGAGTTGTAATAATTTGCTTTCCACCGCACTGTACGCATAAAATGCAACCTGCTGATGTAGGTTTCATGAGGCCTTTAAGTACTTATTATGACCATGCTGCCTCAAATTGGTTGAGATCGCATCCAGGACGCGTAATCACCATGTTTCAAATAAGCGAAATATTTGGACAAGCTTACATGCAAGCAACTACGATGTCCACAGCGGTCAACAGCTTCAGGAAGTGTGGTATTTGGCCATACAACCAAGATAATTTCAGTGATGCTGACTTCATAGCTGCGGAAACTACAAATATACCATTAGCTCAAGACAATCCATCTACGTCAAGGGCTATCGCAAACATACCTCCTCATTCCGGACTTGAAGTGTCAACAACTTCAAACTTTGTGAACGCGCAGTCGATGGAAACAGAGCCTCATACAGAACCTGAAATACCATCCGCGTCAAGTTCTGCAATTCTTCCTTCAACAGAGTCAGTACCTCATTCCGGTCGTGAAGAACCAACCATGTCAAGTCTTGTCAACGCTCAATCAATGGAGACAGAGTCCCAAACTGGATCTACGTTGATTTCTGCAAACTTTGCCTCAACAGAGTCATCACATCATTCTGGACATAAAGTACCAGCCACGTCGAGCTTTGTTAATGATCAGTCAATGGAAATAGAGCCTCATAGTGGACATGAATCACCATCCACTTTAAGCTCTGCATACTTTGCTTCAACAAAGGAAGCACTTAATCCCGGATATGAAGTGCCAGCTGCGTCAAGCTTTTTCAACGCTTGCTCGATGGAGACAGAAGCTCATACTGGATCTCTAGCACCATCCACGTTAACTCCTGCAAACCTTCTTTCAACAGTCAGCATCTCGCACCGAATCTGA
- Protein Sequence
- MVRNYKKKTKRGEWSQESMKAAIDEVLSKNSGYRKAALEHNIPQTTLERYVKKIKRGEEITVGLPLGLMKSVFSQNEEKELAEYVKHMEERLFGLTTLDLRRLAYQLAVKNNKKHNFNNEKEMAGVDWLNGFLKRNPDLSIRKPEATSAARAMGFNRVAVGNFYQLLGETYDAFHFTPDKIYNCDETGISVVSKTKSKIIALKGRKQVGSLSSAERGQTVTVEICFNAAGTYMPPFIIFPRQRMKPELLDNAPPGTTSVCNPKGWITVELFTLWFKKFIQFTGASPSNKVLLLLDGHVSHTQNIDVIDLARQHGVVIICFPPHCTHKMQPADVGFMRPLSTYYDHAASNWLRSHPGRVITMFQISEIFGQAYMQATTMSTAVNSFRKCGIWPYNQDNFSDADFIAAETTNIPLAQDNPSTSRAIANIPPHSGLEVSTTSNFVNAQSMETEPHTEPEIPSASSSAILPSTESVPHSGREEPTMSSLVNAQSMETESQTGSTLISANFASTESSHHSGHKVPATSSFVNDQSMEIEPHSGHESPSTLSSAYFASTKEALNPGYEVPAASSFFNACSMETEAHTGSLAPSTLTPANLLSTVSISHRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01545688; iTF_01544817; iTF_00825631;
- 90% Identity
- iTF_01545688;
- 80% Identity
- -