Basic Information

Gene Symbol
-
Assembly
GCA_947310845.1
Location
OX371219.1:4975683-4990748[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-12 1.1e-08 36.1 0.0 3 83 230 303 229 304 0.87
2 2 0.072 2.4e+02 3.1 0.0 74 89 426 441 400 441 0.77

Sequence Information

Coding Sequence
ATGAGTCTTCTATTCACAGTAAAAAAAAACTACCAAGACGAAGTGCTGACCATCGGCGAGAAGGTGGTCCTCCGGGCATCAGACCTGCCCAGTTGGGTGTGCGCGGGCGCAGAGTGGCGGTGGGGGTTGCGCGCGGTGTGGCGCGGCGCGTGCGCACCGCCCGCCGAGCCTCGGCCCACGCAGCCGTTACACCGCGCCCAGCTCGACTTCAGCGACGTGGACTCGGAGAAAAAGTCCATTGCCGAAGACGAGAACGCGCCGGGCGTGGTAGTGTTTTCATACCCGCGGTACTGCCGCTACCGCGCGCTTATGTCGCGGTTGGAAGGAACGCACGCGCATTGGTTGCGGCAGTCGCTGGTCGCCGCGCTCGGCGGGTACGCCGCGCCCACTGCCAACACTAGGATACTCTACTGCAGGGAAACCTTCGACTACCCAGAGCTGGAAGGGCACGAGTTCGTCTGCAACCATCTGGCGCCGAAACTGAAGGGGCGGCCTCGCGGGCGGCGGCGGCGGCGCGCTCGGTCCCGCTCGCACTCGCGGACCTCCCGTTCGAGTGAGAGCGACGGCGAGAAGCGGTCGCCCAGCGAGCAGCAGCAGACGCCCCGACGCATCTCCCTCCGCAACGGGAAGACCAGCGATGATGATGAGGAGGATCGGAAGAAGCAAGCGGAGCGAGACGCGCTGGACAAAGCGTTCATGCGGCAGCTCAAGGGGTTTTACAAGACTCGGAGCGAATCCTTCAAGATGGCGCAGAGCCTTAAAGATTTGTCCCTCCGCGCGCTTTACGAGGGCGTGTCGCGGCGCGGCGGCTACGCGGCCGTGTCGCGCCGACGCGGCTGGCGCGCCGTGCACGCGGCGCTGCGACCGCGCCCCGCCGACGCGCAGACCACCAAGACTTACTACGAGAGACCACCAAGACTTACTACGAGAGGTGAGACGCTTGGCTTCAAGTTGATTGTAACACACAATATACACATGCACGCACGCACGAAGCAACAAACTGATGGACAGACGAACACACACGCGGCCGTGCAAGCGGCCCGTCGATGCACAGACCACCAAGACTTACTACGAAAGACACGCACGAAGCAACAAACTGACGGACAAACGAACACACACGCGGCCGTGCAAGCGGCCCGTCGATGCCACCAAGACATACTACGAAAGCCACCAACACACAACATACACATGCACGCATGCACGAAGCAACAAATAGACAGACAAACGAACACACACACGGCCGTGCACGGGGCGCTGCGCCCGCGCACCGTCGATAGAGAGACCACCAAGACTTACTACGAGAGGTTCCTACTATCCTACGAAAACCACCAAAGACGCAACGGCACCACAATCTTCAACACCACGACGAAATCCCACGCGCCCATCGTCGACACCATTGACGTCACAGAGTCCCCACTCCGGGAAACCACCACCAAGCTGGAGACGCCAGCCAAACGCCTGAGGACCCCCCCTCCCCAACCAAAGGACCTCAGCGACCCCAAAAAGGAGGTCAAGCAGGAAAAACCCGCCGAGACAATAAACAAAGAATTCCTAGACTCACTACCTAAGGAATCACCCTCCCCTATGAAGCTGACTCTGAAACCGGTAGAACTTCTCCTAGATTACAAGCAAGAGGCCAAAGTGGACACGAAATACTTGACGTTCCCAGAGGATCTTAGGAATAATGAGATGATAAAGTCTTTCGCGGAGGATAATAGTGCTCTCATCGCCGAGATAGCTAACAAGTATAATTTGAAGGACTCTAGTAAGATCCTAGAGGAGATCGCGAGTAAGCAGGGACTGAGCGACGGGAACAGCAAGTTTTTGACGGAATTGGCGCAGAAGTTGAATTTGGGCCACCCCGACTCCACGTTCGTAGGCGATCTGTCCCTCCGCTCGCAAGCCCCGAGCACGACAACGCACAACGGACATTCGGCGGACAGCGACCAGAGCTCCGACCAGAAGGGCGCCGCGCGTCCGGCCGGGCGAAGCTCTCTGCGCTCCGTACGCGTGAAACCGGCGCGCTCACTACAGCCTGCCACCACCACTACCACCACCACACCCCCAATGCCGCCGCTCCGGCCAGACTCCGCCTCGTCCTCGCCTCCTGTCAGCAGTTCGACCAGCCACGCCAGCAACTTTGGCATCAACTACCCCCCCGCACCGGCCCCAGCCAACCAGGTCTCCTCCAGCCAAGACCCGCCGAGCGACGACGAGATTGTCGAGGTGCCCTACAAGCCGAAGACGCCGGAAATAATCGACCTAGACGAGTACCCCGAAAGTCCTCAGTCGGTGAAGAAGAAAAAACTGGACATACTCAAGGAGAGAGGCTTAGAAGTGACAGCCATTCCCAACACATGGACTGCCCCCGTCCCCATTGTCCATCCAGCACCAATGCTGCTCAACCCAGCCGTCCAACACCAGCTCATGACCCAAGCACAACTGCTGCAAATGTACAACATCCTCCCGAGCTACTCAAATGGAGTCCAGCCCCCAAAAGTCATCCAGGGAAAGAGCATCTTCGGGACAAGCGGACCGGAGAAAACTGTCTACGGCAACCCCAAAGATCCCTTCATGCCACCCCCACATATACTGCAAGGTACGCCCATAAAACCTGCCAGGAACATACCCACGGCCACGCAGCCCACACCTCAAGACATACTAGACTTGACGTGCAAGACTAGTACCGTGGTCTCACCTCAAAAACCGGCCGTTGAAATTGTGAAAGTCCCCACCGTTCCGTCCCCAGTCAAGCCTACTCCAGCCCAGAACCTTAGCAAGAACTACACCCTAGTAGATGGTAAGGCAGTCGTTGGCTCCAACCTAGAGATTACCTTAGTCAGTCCTAAAACTCAAACACCGGTGAAAAACCGAGCGCCTCAAAAGAGGTCCTCGAACGGCAAGTTCATCTCAACTAAAACTCCTACACCACCAAAGGAGGTCTATTCCAAGCAGTACAACACGGCTAGTCCATCAGGCGCTCAAAAGGAGAGAAAACCCAACATAGTTGTACCGAACTACCAAATAAATTCAACCAGAGATGATCCGTCACCAACCGGCTCGACCGGTTCAAGCAATTCACAGTCCAGTACGCTCATGCAGAACAATTTTCTGCAAAATGTCTATAAGGGCCAGAATAACTTGGCCCAATTGATCGAGATGCAGAAGAGTGCAGTGCCAAGTTTACCGTTCATAGACCCTATGTACATGAGTGCGATTTACTCGAGCTTAGCTGGACAGATGGATCAGAGACAGTTGGCTATGTACCGGGACCTTATGGCCAGTCAGCTAAGGAGCTATCCCGGTCTTCTGAACATGGGAGCGGTTTCCAATACGCCTACAACGAAAAATTAG
Protein Sequence
MSLLFTVKKNYQDEVLTIGEKVVLRASDLPSWVCAGAEWRWGLRAVWRGACAPPAEPRPTQPLHRAQLDFSDVDSEKKSIAEDENAPGVVVFSYPRYCRYRALMSRLEGTHAHWLRQSLVAALGGYAAPTANTRILYCRETFDYPELEGHEFVCNHLAPKLKGRPRGRRRRRARSRSHSRTSRSSESDGEKRSPSEQQQTPRRISLRNGKTSDDDEEDRKKQAERDALDKAFMRQLKGFYKTRSESFKMAQSLKDLSLRALYEGVSRRGGYAAVSRRRGWRAVHAALRPRPADAQTTKTYYERPPRLTTRGETLGFKLIVTHNIHMHARTKQQTDGQTNTHAAVQAARRCTDHQDLLRKTRTKQQTDGQTNTHAAVQAARRCHQDILRKPPTHNIHMHACTKQQIDRQTNTHTAVHGALRPRTVDRETTKTYYERFLLSYENHQRRNGTTIFNTTTKSHAPIVDTIDVTESPLRETTTKLETPAKRLRTPPPQPKDLSDPKKEVKQEKPAETINKEFLDSLPKESPSPMKLTLKPVELLLDYKQEAKVDTKYLTFPEDLRNNEMIKSFAEDNSALIAEIANKYNLKDSSKILEEIASKQGLSDGNSKFLTELAQKLNLGHPDSTFVGDLSLRSQAPSTTTHNGHSADSDQSSDQKGAARPAGRSSLRSVRVKPARSLQPATTTTTTTPPMPPLRPDSASSSPPVSSSTSHASNFGINYPPAPAPANQVSSSQDPPSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTAIPNTWTAPVPIVHPAPMLLNPAVQHQLMTQAQLLQMYNILPSYSNGVQPPKVIQGKSIFGTSGPEKTVYGNPKDPFMPPPHILQGTPIKPARNIPTATQPTPQDILDLTCKTSTVVSPQKPAVEIVKVPTVPSPVKPTPAQNLSKNYTLVDGKAVVGSNLEITLVSPKTQTPVKNRAPQKRSSNGKFISTKTPTPPKEVYSKQYNTASPSGAQKERKPNIVVPNYQINSTRDDPSPTGSTGSSNSQSSTLMQNNFLQNVYKGQNNLAQLIEMQKSAVPSLPFIDPMYMSAIYSSLAGQMDQRQLAMYRDLMASQLRSYPGLLNMGAVSNTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-