Basic Information

Gene Symbol
-
Assembly
GCA_947311075.1
Location
OX371256.1:4004729-4019896[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-15 1e-11 45.5 0.0 4 89 240 318 238 318 0.89

Sequence Information

Coding Sequence
ATGCAGGACGAAGTGTTGGCGATCGGCGAGAAGGTGGTCCTGCGCGCCTCTGATCTGCCCAGCTGGGTGAGCGCGGGCGCCGAGTGGCGCTGGGGCCTGCGCGCGGTGTGGCGCGGCGCGTGCGCACCGCCCGCCGAGCCGCGCCCCACGCAACCGCTGCACCGCGCTCAGCTGGACTTTAGCGACGTGGACTCGGAAAAAAAGTCCATAGCCCTAGACGAGAACGCACCGGGCGTGGTAGTGTTCTCATACCCGCGGTACTGCCGCTACCGCGCGCTGCTGTCGCGGCTGGAGGGCGCGCACGCGCACTGGCTCCGGCAGTCGCTGGTTGCCGCGCTCGGCGGGTACGCGGCGCCCACCGCCAATACTAGGATACTATACTGCAGGGAAACCTTCGACTACCCAGAGCTGGAAGGGCACGAGTTCGTCTGCAACCACCTGGCGCCCAAGCTGAAGGGGCGGCCGCGCGGGCGGCGGCGGCGGCGCGCGCGGTCTCGCTCGCACTCGCGCACCTCGCGCTCGAGCGAGAGCGACGGCGAGAAGCGGTCGCCGAGCGAGCAGCAGCGCACCTCACGCTCGAGTGAAAGAGATGGGGAGCAACGATCGCCGAGCGAGCAGCAGCAGACCCCCCGGCGTATCTCCCTCCGCAACGGGAAGACCAGCGATGATGATGAGGAGGACCGCAAGAAGCAGGCGGAGAGGGAGGCGCTGGACAAGGTTTTCATGCGCCAGCTGAAGGGGTTCTACAAGACGCGGAGCGAGTCTTTCAAGATGGCGCAGAGTCTCAAGGATTTATCTCTACGCGCGCTATACGAGGGCGTGTCGCGTCGCGGCGGCTACGCGGCCGTGTCGCGGCGGCGCGGCTGGCGCGCCGTGCACGCGGCGCTGCGCCCGCGCCCCGCCGACGCGCAGACCACCAAGACTTACTACGAGAGGTTCCTACTATCCTACGAAAATCACCAAAGACGCAACGGCACCACTATCTTCAACACCACCGCGAAAACCCACGCGCCGCCCATCGTCGACACCATAGACGTCACAGAATCCCCACTCCGGGAAACCACCACCAAGCTGGAGACCCCAGTCAAACGCCTGAGGACCCCCCCTCCCCAACCAAAGGCGGAGGACCTCAGCGAACCCAAAAAGGAAGTTAAGGAAGAAAAACCCGCCGACACAATAAACAAAGAATTCCTAGACTCACTAGCAGCTAAAGAATCATCCTCCCCGCTGAAGCTGACACTAAAACCAGTCGAACTACTTCTAGACTACAAACAAGAAGCCAAAGTAGACACGAAGTACTTGACCTTCCCGGAGGATCTTAGGAATAACGAGATGATTAAGTCGTTCGCGGAAGATAATAGTGCTCTGATCGCCGAGATAGCTAACAAGTATAATTTGAAGGACTCGAGTAAGATTCTTGAGGAGATCGCGAGTAAGCAGGGTCTGAGCGACGGGAACAGCAAGTTTTTGACGGAATTGGCGCAGAAGTTGAACTTGGGCCACCCTGACTCCACGTTCATGGGCGATCTGTCCCTTCGCTCGCAAGCGCCGAGCACCACCACGCACAACGGACACTCGGCCGACAGCGACCAGAGCTCGGATCAGAAGGGCGCCTCGCGTCCGGCCGGCCGCAGTTCGCTCCGCTCTGTGCGAGTGAAGCCGGCGCGCTCCCTGCAGCCTGCTACGACCACCACTAACACTACACCCCCGATGCCGCCGCTGCGACCAGACTCTGCCTCCTCCTCACCTCCCGTTAGCAGTTCAACCAGCCACGCCAGCAACTTTGGCATAAACTACCCTCCCGCGCCGGCTCCTGCCAACCAGGTCTCCTCCAGCCAAGACCCGCCGAGCGATGACGAGATTGTCGAGGTGCCCTACAAGCCGAAGACACCGGAAATAATCGACCTCGACGAATACCCCGAGAGTCCGCAGTCGGTGAAGAAGAAAAAGCTAGACATTCTCAAGGAGAGAGGCTTAGAAGTGACAGCCATTCCCAACACCTGGACTCCCCCAGTCCCCGTTGTCCATCCAGCCCCGATGCTCCTCAACCCAGCCGTCCAACACCAGCTCATGACCCAAGCGCAGCTGTTCCAAATGTACAACATACTCCCGAGCTACTCAAACGGAGTCCAACCCCCAAAAGTCATCCAGGGAAAGAGCATCTTCGGGACAAGCGGTCCGGAGAAAACGGTCTACGGCAACCCCAAAGACCCCTTCATGCCACCCCCACACATACTGCAAGGTACGCCCATAAAACCCACTAGGAACATACCGACGGCGACGCAACCCACTCCTCAGGACATACTAGACTTGACGTGCAAGACTAGTACTGCAGTCTCCCCTCAAAAGCCTGCCGTTGAAATTGTAAAAGTCCCCAACGTCCCGTCCCCAGTCAAGCCTGCTCCAGCCCAAAACCTTACTAAGAACTACACTCTATTAGACGGTAAAGCTGTCGTTGGCTCCAACTTAGAGATCACCTTAGTCAGTCCCAAAAATCAAACACCGGTGAAAAATCGAGCACCTCAAAAAAGATCCTCAAACGGCAAGTTCATCTCGACTAAAACTCCTACACCGCCAAAGGAGGTCTACTCCAAGCAGTACAACACACCTAGCCCATCAGGCGCCCAAAAGGACAGGAAACCCAACATAGTCGTACCCAACTACCAAATAAATTCAACCAGAGACGATCCGTCACCAACCGGCTCGACCGGTTCAAGCAATTCACAGTCTAGCACGCTCATGCAGAACAATTTTCTGCAAAACGTCTACAAGGGCCAGAACAATTTGGCCCAACTGATTGAGATGCAAAAGAGTGCGGTGCCAAGTTTACCGTTCATAGACCCTATGTACATGAGTGCAATTTACTCGAGCTTAGCGGGCCAGATGGATCAGAGACAGTTGGCCATGTACCGGGACCTTATGGCCAGCCAGCTAAGGAGTTATCCGGGTCTCCTAAACATGGGCGCGGTTTCCAATACGCCTACAACGAAAAATTAG
Protein Sequence
MQDEVLAIGEKVVLRASDLPSWVSAGAEWRWGLRAVWRGACAPPAEPRPTQPLHRAQLDFSDVDSEKKSIALDENAPGVVVFSYPRYCRYRALLSRLEGAHAHWLRQSLVAALGGYAAPTANTRILYCRETFDYPELEGHEFVCNHLAPKLKGRPRGRRRRRARSRSHSRTSRSSESDGEKRSPSEQQRTSRSSERDGEQRSPSEQQQTPRRISLRNGKTSDDDEEDRKKQAEREALDKVFMRQLKGFYKTRSESFKMAQSLKDLSLRALYEGVSRRGGYAAVSRRRGWRAVHAALRPRPADAQTTKTYYERFLLSYENHQRRNGTTIFNTTAKTHAPPIVDTIDVTESPLRETTTKLETPVKRLRTPPPQPKAEDLSEPKKEVKEEKPADTINKEFLDSLAAKESSSPLKLTLKPVELLLDYKQEAKVDTKYLTFPEDLRNNEMIKSFAEDNSALIAEIANKYNLKDSSKILEEIASKQGLSDGNSKFLTELAQKLNLGHPDSTFMGDLSLRSQAPSTTTHNGHSADSDQSSDQKGASRPAGRSSLRSVRVKPARSLQPATTTTNTTPPMPPLRPDSASSSPPVSSSTSHASNFGINYPPAPAPANQVSSSQDPPSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTAIPNTWTPPVPVVHPAPMLLNPAVQHQLMTQAQLFQMYNILPSYSNGVQPPKVIQGKSIFGTSGPEKTVYGNPKDPFMPPPHILQGTPIKPTRNIPTATQPTPQDILDLTCKTSTAVSPQKPAVEIVKVPNVPSPVKPAPAQNLTKNYTLLDGKAVVGSNLEITLVSPKNQTPVKNRAPQKRSSNGKFISTKTPTPPKEVYSKQYNTPSPSGAQKDRKPNIVVPNYQINSTRDDPSPTGSTGSSNSQSSTLMQNNFLQNVYKGQNNLAQLIEMQKSAVPSLPFIDPMYMSAIYSSLAGQMDQRQLAMYRDLMASQLRSYPGLLNMGAVSNTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01545549;
80% Identity
-