Ypad019046.1
Basic Information
- Insect
- Yponomeuta padella
- Gene Symbol
- Paxbp1
- Assembly
- GCA_947311075.1
- Location
- OX371235.1:17666334-17695016[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.1e-07 0.011 15.8 0.0 4 42 510 548 507 551 0.89 2 3 0.00089 11 6.0 0.1 15 40 550 575 547 579 0.91 3 3 5.3e-13 6.6e-09 36.2 0.6 20 190 643 792 637 801 0.68
Sequence Information
- Coding Sequence
- ATGTCGCTATTCCGCAAGCCCACAAAGAAGATCCAGCGACGTGTCTTCGGTTGCGCGGACGATGATGAGGACGCCGACCCAGAACCGCCACCACCGCCTATTATCAGCAAGCAGAAGAAAGAAAACAAGCCTATAAAAAGCACCCCAAGCCTCAGCTTCGCCGATGAAGAGGAAGAAGGGGAGGTGTTCAAGGTGAAGAAGTCATCACAGAGCAAACGGCTCGCCAAGAAACGTGAGAAGGAGAGAAGGCACCAAACCGGTGACAGTAACTATGAGAATAATGCTATGGAAGAGGATCAGCCAGCAGACAGCAATGAAAATCCAGATGCCACCGTGAAGCCGAAGAAAAAAGTCACCCTGGAAGGCCTGATTCTATCCGGGCGAGAGGCCCTGGCCGCTGATGGCACGGGGGATCTCTCTGACGATCCCCAAGAGGCGGAGGAAGAAGAGCAGGGGGGGTTCCACCAGTACCGAGCGGAATCGGTCCGCGCTGCGTTGGCCGCTGACGTCATACCGGACGCTGCACTCATCCACGCAGCGAGAAAGACTCGACAGCAGGCCCGCGAGCTCGGCGGAGACTACATCCCTGTGCGCGAGAGCAAGGCCCCCCCGGGCTCCCGCCTGCAGCGCGACGAGGACGGCTCCGGGGACGACGAAGAGGAGGGAGGCCGGCTGCACGTGAGGGGGCTGGATTTGCCCAGTGACAAGCCGAAACGTGGAACCGCGGCGGCGCCTACTGATGCTGAGCTGGATAGCGCTGGCGAGGAGTGGGAGGAGCAGCAGATGCAGAAGGCGATGCCGGCCGTTGACATCGCAGGTGAATCCTCCATAGAGGTGAACCCGTTCGCGGTGGCGCCCCCGCCGCCGCGGCTGGATGACGGGCCGCCGCACCTGCGCCCGCTGGTCTCGGGGGGCGCCCCGCCCACTACCGCCAGGGAGCTCGTCGACGCTTTGGGCGCCAGACTGCAAGAGCTCGAGATCGCCCGATCAATTGTAGCGCAGCGCCGCTCAGAGCTGCAGGACCGTCTGCTGGGCGCCGCGCGTGTGAGGGAGTCAAGACAAGCTCGCTGCCGACCGCTGGCCGAAGCCTACACGCGCGCGCAATCCGCCCGCGCTTACGTCACGGACCTGGTCGAGTGTCTGGATGaaaagATGCCGCAGCTGGAGGCGCTGGAGGCGCGAGCGCTGGCGCTGCATCGCCGCCGCTGCGAGTTCCTGCAGGAGCGGCGCCGGGCCGACGTGCGGGATCAGGCGCAGGACGTGCTGGCGTTGGCAGCCCGGCCGGGAGCCACGCGTCCCCCGGACCCCGAGGACAAGGTGCGGCGCTGCGCCGAGCGCGAGGGTCGCCGCCGCGCCCGCCGGCTCAGGCGGGAGGCCGCCAGGGTCGCGCACCGGGACGGCGACAGCAGCGATGATGACCTGCCTCCCGCTGAGGCGCAGCACGAGAGGAACGAGCGGGAGGCGATCCGCGCGCAGGCGGCGTCGCTGTTCGCGGACACGCTGCCGGCGTGGCGGTCGGCGCGCGGCGTCTGCGCGCGGCTGCAGCGCTGGCGGCGCCGCGACCCCGCCGCCTACAGCGACGCCTACGTCGCCGCCTGCCTGCCCAAGCTGCTAGCGCCGTACGTGCGCCACCAGCGGGGTCGAGTACACCCCGCCGCCTACAGCGACGCCTACGTCGCCGCCTGCCTGCCCAAGCTGCTAGCGCCGTACGTGCGCCACCAGGTGAGCCGCCGGCTAGCGGGGTCGAGTACACCCCGCCGCCTACAGCGACGCCTACGTCGCCGCCTGCCTGCCCAAGCTGCTAGCGCCGTACGTGCGCCACCAGGTGAGCCGCCAGCTAGCGGGGTCGAGTACACCCCGCCGCCTACAGCGACGCCTACGTCGCCGCCTGCCTGCCCAAGCTGCCAGCGCCGTACGTGCGCCACCAGCGACGCCTACGTCGCCGCCTGCCTGCCCAAGCTGCTAGCGCCGTACGTGCGCCACCAGCTCATATTATGGAATCCGCTGGCGGACGAAGATAATGAGGACTACGAAAGGATGGACTGGTACAAATGCCTGATGATGTACGGGCTGGACTCGCAGCGGCTCAGCAGCGACTCCGAGGCGTCCGACGGTGATGAGGAGGAGCCGGTGCTCACTCAGGAGAGCACGCGAACCGATCCGGACCTGAACCTGGTCCCCACCATTGTGCAGAGGGTGCTCGTGCCTAAGTTGACTGAGCTAGTGGAGCACGCGTGGGACCCGGTGACGGTCCGCGCGTGCGTGCGGCTGCGCGGCGTGCTGGCGCGGCTCGTGCTGCTACCGCCGCGCGCCGCGCCGCCGCTGCAGCGCCTCGCCGCCGCCGCGCGCGCGCGCCTCGCCTCCGCGCTCGCCGCCGACGTCTTCCTGCCGGCGCTGCCCCCGCCTATTATGGAGGGCGGCGGCGGCGCGTTCTGGCGGCGCTGCCTGGGCGCCGGCGTGCGCCTGCTGCGCGCCGTGCTGGCGTTGTGCCCGCCGCCCGACGCGCTGCGGGCCGACCCGCTGGCGCTGCAGCTCGTCGGTGAGTCAGAGTGTGTACACTGTGCCGCGTTGTGCCCGCCGCCCGACGCGCTGCGGGCCGACCCGCTGGCGCTGCAGCTCGTCGGTGAGTCAGAGTGTGTACACTGTGCCGCGCCGTGCCCGCCGCCCGACGCGCTGCGGGCCGACCCGCTGGCGCTGCAGCTCGTCGGTGAGTCAGAGTGTGTACACTGTGCCGCGCCGTGCCCGCCGCCCGACGCGCTGCGGGCCGACCCGCTGGCGCTGCAGCTCGTCGGTGAGTCAGAGTGTGTACACTGTGCCGCGCCGTGCCCGCCGCCCGACGCGCTGCGGGCCGACCCGCTGGCGCTGCAGCTCGTCGGTGAGTCAGAGTGTGTACACTGTGCCGCGCCGTGCCCGCCGCCCGACGCGCTGCGGGCCGACCCGCTGGCGCTGCAGCTCGTCGGCACGCTGTGCACGGCGGCGGGCGCGGCGCCCGCGCCGGCGGCGGCGGCGGCGGCGGCGGCGCTGGCCTCCACGCTGCCGCGCGAGGCCGAGCTGCGCGGCCGGGCGCTGGCGCGGCTCGCGGCGCTGGCCCGGCACGCGCTCGACCACCTGCAGCCCGACAACCCGCTGCACCTGAAAGCAGTAGAGCAAGCGAGATCGGTGTTGGCTGAAGCGAAGGCGTGCAAAGGGCAAGAATAA
- Protein Sequence
- MSLFRKPTKKIQRRVFGCADDDEDADPEPPPPPIISKQKKENKPIKSTPSLSFADEEEEGEVFKVKKSSQSKRLAKKREKERRHQTGDSNYENNAMEEDQPADSNENPDATVKPKKKVTLEGLILSGREALAADGTGDLSDDPQEAEEEEQGGFHQYRAESVRAALAADVIPDAALIHAARKTRQQARELGGDYIPVRESKAPPGSRLQRDEDGSGDDEEEGGRLHVRGLDLPSDKPKRGTAAAPTDAELDSAGEEWEEQQMQKAMPAVDIAGESSIEVNPFAVAPPPPRLDDGPPHLRPLVSGGAPPTTARELVDALGARLQELEIARSIVAQRRSELQDRLLGAARVRESRQARCRPLAEAYTRAQSARAYVTDLVECLDEKMPQLEALEARALALHRRRCEFLQERRRADVRDQAQDVLALAARPGATRPPDPEDKVRRCAEREGRRRARRLRREAARVAHRDGDSSDDDLPPAEAQHERNEREAIRAQAASLFADTLPAWRSARGVCARLQRWRRRDPAAYSDAYVAACLPKLLAPYVRHQRGRVHPAAYSDAYVAACLPKLLAPYVRHQVSRRLAGSSTPRRLQRRLRRRLPAQAASAVRAPPGEPPASGVEYTPPPTATPTSPPACPSCQRRTCATSDAYVAACLPKLLAPYVRHQLILWNPLADEDNEDYERMDWYKCLMMYGLDSQRLSSDSEASDGDEEEPVLTQESTRTDPDLNLVPTIVQRVLVPKLTELVEHAWDPVTVRACVRLRGVLARLVLLPPRAAPPLQRLAAAARARLASALAADVFLPALPPPIMEGGGGAFWRRCLGAGVRLLRAVLALCPPPDALRADPLALQLVGESECVHCAALCPPPDALRADPLALQLVGESECVHCAAPCPPPDALRADPLALQLVGESECVHCAAPCPPPDALRADPLALQLVGESECVHCAAPCPPPDALRADPLALQLVGESECVHCAAPCPPPDALRADPLALQLVGTLCTAAGAAPAPAAAAAAAALASTLPREAELRGRALARLAALARHALDHLQPDNPLHLKAVEQARSVLAEAKACKGQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01542985;
- 90% Identity
- -
- 80% Identity
- -