Basic Information

Insect: Yponomeuta evonymella
Gene Symbol: -
Assembly: GCA_963969515.1
Location: OZ018372.1:1469435-1486722[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.7 1.4e+02 4.1 0.5 1 21 249 269 249 272 0.88

2 10 0.034 2.9 9.4 1.2 3 23 306 327 304 327 0.95

3 10 0.0012 0.099 14.0 4.1 1 23 370 392 370 393 0.94

4 10 7.3e-05 0.0061 17.8 0.2 1 23 397 419 397 419 0.97

5 10 2.9 2.4e+02 3.4 0.1 2 23 427 447 427 447 0.88

6 10 0.021 1.7 10.1 0.6 3 21 455 473 454 478 0.91

7 10 0.00011 0.0092 17.3 0.9 1 23 486 509 486 509 0.96

8 10 0.00068 0.057 14.8 3.5 1 23 515 538 515 539 0.97

9 10 4.1e-05 0.0034 18.6 0.3 2 23 549 570 548 570 0.96

10 10 0.0001 0.0086 17.4 0.5 2 23 577 599 576 599 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.7	1.4e+02	4.1	0.5	1	21	249	269	249	272	0.88
2	10	0.034	2.9	9.4	1.2	3	23	306	327	304	327	0.95
3	10	0.0012	0.099	14.0	4.1	1	23	370	392	370	393	0.94
4	10	7.3e-05	0.0061	17.8	0.2	1	23	397	419	397	419	0.97
5	10	2.9	2.4e+02	3.4	0.1	2	23	427	447	427	447	0.88
6	10	0.021	1.7	10.1	0.6	3	21	455	473	454	478	0.91
7	10	0.00011	0.0092	17.3	0.9	1	23	486	509	486	509	0.96
8	10	0.00068	0.057	14.8	3.5	1	23	515	538	515	539	0.97
9	10	4.1e-05	0.0034	18.6	0.3	2	23	549	570	548	570	0.96
10	10	0.0001	0.0086	17.4	0.5	2	23	577	599	576	599	0.96

Sequence Information

Coding Sequence: ATGGGCGACACTTTGATGCCCATGGTGCAATCGCACTGTTGTACGTGTCTCAGCAAAGATCGTAAGCTACATCGACTGTGCCGGATTGTTGGAGGTGTTAATAACTTGTACACGCTGCTATCCATCGACGCCGAAGCGTACCGAGAAGGCTTCTACACGGAGGCCGGCGCACTGTGTGTGTGCTGGGAGTGCGGCGCGCTTCTACGTCGCTTTGCACGCTTCCGCCGGCAGGCGTGCACCGCTCAGCGTGCACTGGCTAAAGGGATAGACCTTCTGTCTCTCTCGCACCTCACCGTCGAGACTCTGCCCTCTCACTCCCACGTTCCTCTGATGTCACCGGCGCAGACGCAAGTTGGCGCTGACAACTTCGTGGACTGCGGACCGGTTGATGTCAAGTCTGAACCGGAAGATGCAGATGATGTTCCGTTGTCGCGGTTGAAAGGATCACATAGTGACCCGCCCCCCGTCAGtgacaatgatgatgatatggacGATTCCTTTATCTGCAATGACACGATCAAGGGAATATTTGGGAAAGCCAAGCATGCGAGAAAAGACAAAGAAAAAAAGCGTAAAGAAAGAAATGGACCGAAAACTACCGCGAAAAAGACAAATCTGTCAAAGGAATCTAGCCCGTcgacgaataaaaataaaacatattacaGCTCAGTAGAGTTAAGCAAAGAGGAATTCTTAGAAAGCGTTGAAAAACGCAAATTGACGGTAAATTATGTCGACGCGTTTTACAAATGTGAAACGTGCATAGAAGGATTCAAACTCAAAACGGATCTCGACAGTCACAACTTGGCGTTTCACACTGAGAAACCGAAACACACTTCCTGCGACATCTGCCGGCGCTACGTCGAAACCACTTGCCTAAAAGAGCACCAGAGAGGCCATTACTACAAGCATCTGTGCGACTTCTGTGACTATGTTACTTACTCCACGAGCGAGATACTCAGGCATTTGAAGACTGGACATGCTATGCAGAAGCTTGCGGTCACTGTTAATAGAAAACGGGGCCAGCGCAGGACGCCCCGCGTGCAAAATCCCGGCTCTAAGCCCAGAAGGAGCCAAGCACTGATGGACAAGAGAACGCCCTTCGGTTACCTGTGCACCGACTGCAATAAATACTTCGACAACAAAAACCAGCGCTGGAAGCACATTCAGCGGCACCACCGCGAGGGCTACCCGTGTGGCGTTTGCGGGAAACGATTCGCCTTCAAAAGCAACCGGGCGAGGCATGAGGCAATGCACGTCGCGCCGCCTCCGCGTGAGAAATGCCCGACGTGCGAGAAGATGATCCGCGTCGACCTTATGGGGGCGCACGCGCGCACTCACGAGCAGCGAGAGGCGCGCAGTTGCGCCGCTTGTGACAAAACTTTTGTCAGCCTGGCATCCTACGAGCATCATTTGAAGTATACCAAAGCTCACACCACGCACGATATTTTGAAGTACAAATGCTCTCAGTGCGAGAAGGGCTACCGGTCGCGCGGTGAGTTGAGGGATCACGTCAACTATCAGCATTTGAGGAAGACCCTCCACCAGTGTCCAGTCTGCGGCAAGGCGCTGGCGACGCGGCGCTGCGTGACGCGGCATGTGCGGCGAGCCCACCACGGCGTGCGCGAGTCGGCGCGGGACAAAGTCTGCCAGCTCTGCGGGAAGGCTTTCCGGGACAAGAAAGGGTTGAGGGAGCACGAGCTCATTCACTCGGGGGAGAGACCTCTCAACTGCGAGCTGTGCGGCGCCAAGTTTCGGCAGAGCGCTTCGCTTTACACGCACCGTCGAAGGGTACACAAGGTGGCGCCGCGGAACATTGTGGTCGAGCACACGACCGTCAACCAGACAGAAGTGGAAACTCAACCAAAATAA
Protein Sequence: MGDTLMPMVQSHCCTCLSKDRKLHRLCRIVGGVNNLYTLLSIDAEAYREGFYTEAGALCVCWECGALLRRFARFRRQACTAQRALAKGIDLLSLSHLTVETLPSHSHVPLMSPAQTQVGADNFVDCGPVDVKSEPEDADDVPLSRLKGSHSDPPPVSDNDDDMDDSFICNDTIKGIFGKAKHARKDKEKKRKERNGPKTTAKKTNLSKESSPSTNKNKTYYSSVELSKEEFLESVEKRKLTVNYVDAFYKCETCIEGFKLKTDLDSHNLAFHTEKPKHTSCDICRRYVETTCLKEHQRGHYYKHLCDFCDYVTYSTSEILRHLKTGHAMQKLAVTVNRKRGQRRTPRVQNPGSKPRRSQALMDKRTPFGYLCTDCNKYFDNKNQRWKHIQRHHREGYPCGVCGKRFAFKSNRARHEAMHVAPPPREKCPTCEKMIRVDLMGAHARTHEQREARSCAACDKTFVSLASYEHHLKYTKAHTTHDILKYKCSQCEKGYRSRGELRDHVNYQHLRKTLHQCPVCGKALATRRCVTRHVRRAHHGVRESARDKVCQLCGKAFRDKKGLREHELIHSGERPLNCELCGAKFRQSASLYTHRRRVHKVAPRNIVVEHTTVNQTEVETQPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01543308;
90% Identity: iTF_01545224;
80% Identity: -